RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
CCDC178-201ENST00000300227 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
CCDC178-201ENST00000300227 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCDC178-201ENST00000300227 NAIPQ13075 1403 aa20.41■□□□□ 0.86
CCDC178-201ENST00000300227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC178-201ENST00000300227 CDC42BPAQ5VT25 1732 aa20.38■□□□□ 0.85
CCDC178-201ENST00000300227 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
CCDC178-201ENST00000300227 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
CCDC178-201ENST00000300227 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
CCDC178-201ENST00000300227 ASXL2Q76L83 1435 aa20.35■□□□□ 0.85
CCDC178-201ENST00000300227 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
CCDC178-201ENST00000300227 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
CCDC178-201ENST00000300227 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
CCDC178-201ENST00000300227 TRIM52Q96A61 297 aa20.33■□□□□ 0.85
CCDC178-201ENST00000300227 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
CCDC178-201ENST00000300227 AKNAQ7Z591 1439 aa20.31■□□□□ 0.84
CCDC178-201ENST00000300227 EFCAB2Q5VUJ9 269 aa20.31■□□□□ 0.84
CCDC178-201ENST00000300227 PREX2Q70Z35 1606 aa20.29■□□□□ 0.84
CCDC178-201ENST00000300227 PLCH2O75038 1416 aa20.29■□□□□ 0.84
CCDC178-201ENST00000300227 ROCK1Q13464 1354 aa20.29■□□□□ 0.84
CCDC178-201ENST00000300227 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
CCDC178-201ENST00000300227 SAMD9LQ8IVG5 1584 aa20.27■□□□□ 0.84
CCDC178-201ENST00000300227 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
CCDC178-201ENST00000300227 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
CCDC178-201ENST00000300227 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
CCDC178-201ENST00000300227 C9orf84Q5VXU9 1444 aa20.25■□□□□ 0.83
CCDC178-201ENST00000300227 RIMBP3CA6NJZ7 1639 aa20.25■□□□□ 0.83
CCDC178-201ENST00000300227 RIMBP3BA6NNM3 1639 aa20.25■□□□□ 0.83
CCDC178-201ENST00000300227 RIMBP3Q9UFD9 1639 aa20.25■□□□□ 0.83
CCDC178-201ENST00000300227 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
CCDC178-201ENST00000300227 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
CCDC178-201ENST00000300227 KDM6BO15054 1643 aa20.24■□□□□ 0.83
CCDC178-201ENST00000300227 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
CCDC178-201ENST00000300227 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
CCDC178-201ENST00000300227 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
CCDC178-201ENST00000300227 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
CCDC178-201ENST00000300227 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
CCDC178-201ENST00000300227 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
CCDC178-201ENST00000300227 ARHGEF12Q9NZN5 1544 aa20.18■□□□□ 0.82
CCDC178-201ENST00000300227 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
CCDC178-201ENST00000300227 PLEKHH2Q8IVE3 1493 aa20.18■□□□□ 0.82
CCDC178-201ENST00000300227 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
CCDC178-201ENST00000300227 KIF15Q9NS87 1388 aa20.17■□□□□ 0.82
CCDC178-201ENST00000300227 AFAP1Q8N556 730 aa20.17■□□□□ 0.82
CCDC178-201ENST00000300227 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
CCDC178-201ENST00000300227 SHANK2Q9UPX8 1470 aa20.17■□□□□ 0.82
CCDC178-201ENST00000300227 MPHOSPH9Q99550 1183 aa20.17■□□□□ 0.82
CCDC178-201ENST00000300227 FANCAO15360 1455 aa20.16■□□□□ 0.82
CCDC178-201ENST00000300227 ANKRD50Q9ULJ7 1429 aa20.16■□□□□ 0.82
CCDC178-201ENST00000300227 FOXD1Q16676 465 aa20.16■□□□□ 0.82
CCDC178-201ENST00000300227 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
CCDC178-201ENST00000300227 TRAPPC8Q9Y2L5 1435 aa20.14■□□□□ 0.82
CCDC178-201ENST00000300227 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
CCDC178-201ENST00000300227 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
CCDC178-201ENST00000300227 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
CCDC178-201ENST00000300227 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
CCDC178-201ENST00000300227 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
CCDC178-201ENST00000300227 ABCC1P33527 1531 aa20.11■□□□□ 0.81
CCDC178-201ENST00000300227 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
CCDC178-201ENST00000300227 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
CCDC178-201ENST00000300227 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
CCDC178-201ENST00000300227 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
CCDC178-201ENST00000300227 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
CCDC178-201ENST00000300227 NUP155O75694 1391 aa20.06■□□□□ 0.8
CCDC178-201ENST00000300227 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
CCDC178-201ENST00000300227 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
CCDC178-201ENST00000300227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC178-201ENST00000300227 PKD2Q13563 968 aa20.01■□□□□ 0.79
CCDC178-201ENST00000300227 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
CCDC178-201ENST00000300227 PZPP20742 1482 aa20■□□□□ 0.79
CCDC178-201ENST00000300227 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
CCDC178-201ENST00000300227 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
CCDC178-201ENST00000300227 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
CCDC178-201ENST00000300227 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CCDC178-201ENST00000300227 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
CCDC178-201ENST00000300227 ANKRD30BQ9BXX2 1392 aa19.94■□□□□ 0.78
CCDC178-201ENST00000300227 PLXNC1O60486 1568 aa19.93■□□□□ 0.78
CCDC178-201ENST00000300227 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
CCDC178-201ENST00000300227 ZFYVE16Q7Z3T8 1539 aa19.93■□□□□ 0.78
CCDC178-201ENST00000300227 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
CCDC178-201ENST00000300227 ZNF518AQ6AHZ1 1483 aa19.91■□□□□ 0.78
CCDC178-201ENST00000300227 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
CCDC178-201ENST00000300227 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
CCDC178-201ENST00000300227 KIF3BO15066 747 aa19.89■□□□□ 0.78
CCDC178-201ENST00000300227 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
CCDC178-201ENST00000300227 NEO1Q92859 1461 aa19.89■□□□□ 0.77
CCDC178-201ENST00000300227 DIP2BQ9P265 1576 aa19.88■□□□□ 0.77
CCDC178-201ENST00000300227 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
CCDC178-201ENST00000300227 GLI2P10070 1586 aa19.87■□□□□ 0.77
CCDC178-201ENST00000300227 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
CCDC178-201ENST00000300227 FAM135AQ9P2D6 1515 aa19.86■□□□□ 0.77
CCDC178-201ENST00000300227 MAP3K4Q9Y6R4 1608 aa19.85■□□□□ 0.77
CCDC178-201ENST00000300227 INO80Q9ULG1 1556 aaPredicted RBP19.85■□□□□ 0.77
CCDC178-201ENST00000300227 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
CCDC178-201ENST00000300227 DHX29Q7Z478 1369 aaKnown RBP19.84■□□□□ 0.77
CCDC178-201ENST00000300227 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
CCDC178-201ENST00000300227 TSPOAP1O95153 1857 aa19.8■□□□□ 0.76
CCDC178-201ENST00000300227 DIEXFQ68CQ4 756 aaKnown RBP19.8■□□□□ 0.76
CCDC178-201ENST00000300227 KIDINS220Q9ULH0 1771 aa19.79■□□□□ 0.76
CCDC178-201ENST00000300227 UNC13BO14795 1591 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms