RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
CDH8-201ENST00000299345 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
CDH8-201ENST00000299345 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
CDH8-201ENST00000299345 DAPK1P53355 1430 aa18.97■□□□□ 0.63
CDH8-201ENST00000299345 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
CDH8-201ENST00000299345 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
CDH8-201ENST00000299345 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
CDH8-201ENST00000299345 TROQ12816 1431 aaPredicted RBP18.95■□□□□ 0.62
CDH8-201ENST00000299345 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
CDH8-201ENST00000299345 ABCC5O15440 1437 aa18.94■□□□□ 0.62
CDH8-201ENST00000299345 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
CDH8-201ENST00000299345 BCANQ96GW7 911 aa18.94■□□□□ 0.62
CDH8-201ENST00000299345 PLB1Q6P1J6 1458 aa18.93■□□□□ 0.62
CDH8-201ENST00000299345 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
CDH8-201ENST00000299345 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
CDH8-201ENST00000299345 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
CDH8-201ENST00000299345 FKBP8Q14318 412 aa18.91■□□□□ 0.62
CDH8-201ENST00000299345 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.62
CDH8-201ENST00000299345 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
CDH8-201ENST00000299345 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
CDH8-201ENST00000299345 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
CDH8-201ENST00000299345 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
CDH8-201ENST00000299345 PKD2Q13563 968 aa18.85■□□□□ 0.61
CDH8-201ENST00000299345 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
CDH8-201ENST00000299345 KDM6BO15054 1643 aa18.84■□□□□ 0.61
CDH8-201ENST00000299345 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.6
CDH8-201ENST00000299345 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
CDH8-201ENST00000299345 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
CDH8-201ENST00000299345 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
CDH8-201ENST00000299345 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
CDH8-201ENST00000299345 DNMT1P26358 1616 aaKnown RBP18.8■□□□□ 0.6
CDH8-201ENST00000299345 PTPRGP23470 1445 aa18.79■□□□□ 0.6
CDH8-201ENST00000299345 NUP160Q12769 1436 aa18.79■□□□□ 0.6
CDH8-201ENST00000299345 NCOA1Q15788 1441 aa18.79■□□□□ 0.6
CDH8-201ENST00000299345 DENND4BO75064 1496 aaPredicted RBP18.79■□□□□ 0.6
CDH8-201ENST00000299345 RPRD2Q5VT52 1461 aaKnown RBP18.78■□□□□ 0.6
CDH8-201ENST00000299345 NUP155O75694 1391 aa18.78■□□□□ 0.6
CDH8-201ENST00000299345 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDH8-201ENST00000299345 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
CDH8-201ENST00000299345 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
CDH8-201ENST00000299345 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
CDH8-201ENST00000299345 CCDC7Q96M83 1385 aa18.74■□□□□ 0.59
CDH8-201ENST00000299345 KDM5BQ9UGL1 1544 aa18.74■□□□□ 0.59
CDH8-201ENST00000299345 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
CDH8-201ENST00000299345 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
CDH8-201ENST00000299345 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
CDH8-201ENST00000299345 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
CDH8-201ENST00000299345 ATP10BO94823 1461 aa18.71■□□□□ 0.59
CDH8-201ENST00000299345 ITSN2Q9NZM3 1697 aa18.71■□□□□ 0.59
CDH8-201ENST00000299345 KIF14Q15058 1648 aa18.7■□□□□ 0.58
CDH8-201ENST00000299345 C9orf84Q5VXU9 1444 aa18.69■□□□□ 0.58
CDH8-201ENST00000299345 PRKRIP1Q9H875 184 aaPredicted RBP18.69■□□□□ 0.58
CDH8-201ENST00000299345 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
CDH8-201ENST00000299345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDH8-201ENST00000299345 KIF15Q9NS87 1388 aa18.67■□□□□ 0.58
CDH8-201ENST00000299345 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
CDH8-201ENST00000299345 PZPP20742 1482 aa18.67■□□□□ 0.58
CDH8-201ENST00000299345 RSPH4AQ5TD94 716 aa18.65■□□□□ 0.58
CDH8-201ENST00000299345 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
CDH8-201ENST00000299345 DCAF11Q8TEB1 546 aa18.64■□□□□ 0.57
CDH8-201ENST00000299345 ADGRL2O95490 1459 aa18.64■□□□□ 0.57
CDH8-201ENST00000299345 USP47Q96K76 1375 aa18.63■□□□□ 0.57
CDH8-201ENST00000299345 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
CDH8-201ENST00000299345 ABCA8O94911 1581 aa18.61■□□□□ 0.57
CDH8-201ENST00000299345 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
CDH8-201ENST00000299345 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
CDH8-201ENST00000299345 RGL3Q3MIN7 710 aa18.6■□□□□ 0.57
CDH8-201ENST00000299345 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.57
CDH8-201ENST00000299345 ADCY10Q96PN6 1610 aa18.57■□□□□ 0.56
CDH8-201ENST00000299345 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
CDH8-201ENST00000299345 SHANK2Q9UPX8 1470 aa18.55■□□□□ 0.56
CDH8-201ENST00000299345 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
CDH8-201ENST00000299345 MYT1Q01538 1121 aa18.54■□□□□ 0.56
CDH8-201ENST00000299345 CCDC141Q6ZP82 1450 aa18.54■□□□□ 0.56
CDH8-201ENST00000299345 SPATA31E1Q6ZUB1 1445 aa18.53■□□□□ 0.56
CDH8-201ENST00000299345 TMC1Q8TDI8 760 aa18.53■□□□□ 0.56
CDH8-201ENST00000299345 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
CDH8-201ENST00000299345 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
CDH8-201ENST00000299345 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
CDH8-201ENST00000299345 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
CDH8-201ENST00000299345 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
CDH8-201ENST00000299345 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
CDH8-201ENST00000299345 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
CDH8-201ENST00000299345 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
CDH8-201ENST00000299345 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
CDH8-201ENST00000299345 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
CDH8-201ENST00000299345 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
CDH8-201ENST00000299345 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
CDH8-201ENST00000299345 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
CDH8-201ENST00000299345 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
CDH8-201ENST00000299345 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
CDH8-201ENST00000299345 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
CDH8-201ENST00000299345 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
CDH8-201ENST00000299345 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
CDH8-201ENST00000299345 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
CDH8-201ENST00000299345 SAMD9LQ8IVG5 1584 aa18.38■□□□□ 0.53
CDH8-201ENST00000299345 FAM135AQ9P2D6 1515 aa18.38■□□□□ 0.53
CDH8-201ENST00000299345 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
CDH8-201ENST00000299345 DHX29Q7Z478 1369 aaKnown RBP18.37■□□□□ 0.53
CDH8-201ENST00000299345 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms