RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCDH11X-201ENST00000298274 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
PCDH11X-201ENST00000298274 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
PCDH11X-201ENST00000298274 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
PCDH11X-201ENST00000298274 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
PCDH11X-201ENST00000298274 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
PCDH11X-201ENST00000298274 NUP155O75694 1391 aa16.62■□□□□ 0.25
PCDH11X-201ENST00000298274 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
PCDH11X-201ENST00000298274 KIF3BO15066 747 aa16.61■□□□□ 0.25
PCDH11X-201ENST00000298274 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
PCDH11X-201ENST00000298274 GGT6Q6P531 493 aa16.6■□□□□ 0.25
PCDH11X-201ENST00000298274 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
PCDH11X-201ENST00000298274 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
PCDH11X-201ENST00000298274 WASHC2CQ9Y4E1 1318 aa16.58■□□□□ 0.24
PCDH11X-201ENST00000298274 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
PCDH11X-201ENST00000298274 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
PCDH11X-201ENST00000298274 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
PCDH11X-201ENST00000298274 ITSN2Q9NZM3 1697 aa16.55■□□□□ 0.24
PCDH11X-201ENST00000298274 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
PCDH11X-201ENST00000298274 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
PCDH11X-201ENST00000298274 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 CHD1O14646 1710 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
PCDH11X-201ENST00000298274 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
PCDH11X-201ENST00000298274 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
PCDH11X-201ENST00000298274 PKD2Q13563 968 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 ATP10BO94823 1461 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 ANP32CO43423 234 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 MLECQ14165 292 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 MPHOSPH9Q99550 1183 aa16.51■□□□□ 0.23
PCDH11X-201ENST00000298274 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 NEFMP07197 916 aa16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 NUP153P49790 1475 aaKnown RBP16.5■□□□□ 0.23
PCDH11X-201ENST00000298274 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
PCDH11X-201ENST00000298274 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
PCDH11X-201ENST00000298274 PLCH2O75038 1416 aa16.48■□□□□ 0.23
PCDH11X-201ENST00000298274 AKNAQ7Z591 1439 aa16.46■□□□□ 0.23
PCDH11X-201ENST00000298274 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
PCDH11X-201ENST00000298274 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
PCDH11X-201ENST00000298274 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
PCDH11X-201ENST00000298274 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDH11X-201ENST00000298274 FANCAO15360 1455 aa16.45■□□□□ 0.22
PCDH11X-201ENST00000298274 DAPK1P53355 1430 aa16.44■□□□□ 0.22
PCDH11X-201ENST00000298274 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
PCDH11X-201ENST00000298274 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
PCDH11X-201ENST00000298274 CCDC144AA2RUR9 1427 aa16.44■□□□□ 0.22
PCDH11X-201ENST00000298274 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
PCDH11X-201ENST00000298274 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
PCDH11X-201ENST00000298274 NEFLP07196 543 aa16.41■□□□□ 0.22
PCDH11X-201ENST00000298274 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
PCDH11X-201ENST00000298274 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
PCDH11X-201ENST00000298274 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
PCDH11X-201ENST00000298274 ABCA8O94911 1581 aa16.39■□□□□ 0.21
PCDH11X-201ENST00000298274 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
PCDH11X-201ENST00000298274 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
PCDH11X-201ENST00000298274 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
PCDH11X-201ENST00000298274 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
PCDH11X-201ENST00000298274 NEO1Q92859 1461 aa16.37■□□□□ 0.21
PCDH11X-201ENST00000298274 POGKQ9P215 609 aa16.37■□□□□ 0.21
PCDH11X-201ENST00000298274 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
PCDH11X-201ENST00000298274 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
PCDH11X-201ENST00000298274 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
PCDH11X-201ENST00000298274 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
PCDH11X-201ENST00000298274 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
PCDH11X-201ENST00000298274 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
PCDH11X-201ENST00000298274 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.21
PCDH11X-201ENST00000298274 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.21
PCDH11X-201ENST00000298274 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.2
PCDH11X-201ENST00000298274 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
PCDH11X-201ENST00000298274 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
PCDH11X-201ENST00000298274 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
PCDH11X-201ENST00000298274 TMF1P82094 1093 aa16.3■□□□□ 0.2
PCDH11X-201ENST00000298274 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
PCDH11X-201ENST00000298274 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
PCDH11X-201ENST00000298274 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
PCDH11X-201ENST00000298274 ABCC5O15440 1437 aa16.27■□□□□ 0.2
PCDH11X-201ENST00000298274 DHX29Q7Z478 1369 aaKnown RBP16.27■□□□□ 0.19
PCDH11X-201ENST00000298274 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
PCDH11X-201ENST00000298274 MAPKBP1O60336 1514 aa16.23■□□□□ 0.19
PCDH11X-201ENST00000298274 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
PCDH11X-201ENST00000298274 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
PCDH11X-201ENST00000298274 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
PCDH11X-201ENST00000298274 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
PCDH11X-201ENST00000298274 RAPGEF3O95398 923 aa16.22■□□□□ 0.19
PCDH11X-201ENST00000298274 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.19
PCDH11X-201ENST00000298274 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
PCDH11X-201ENST00000298274 NCOA1Q15788 1441 aa16.2■□□□□ 0.18
PCDH11X-201ENST00000298274 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
PCDH11X-201ENST00000298274 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
PCDH11X-201ENST00000298274 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
PCDH11X-201ENST00000298274 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
PCDH11X-201ENST00000298274 A2MP01023 1474 aa16.19■□□□□ 0.18
PCDH11X-201ENST00000298274 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms