RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ZNF644Q9H582 1327 aaPredicted RBP9.88□□□□□ -0.83
TMC1-201ENST00000297784 FAM50AQ14320 339 aaKnown RBP9.87□□□□□ -0.83
TMC1-201ENST00000297784 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
TMC1-201ENST00000297784 ITGAEP38570 1179 aa9.86□□□□□ -0.83
TMC1-201ENST00000297784 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
TMC1-201ENST00000297784 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
TMC1-201ENST00000297784 CYB5RLQ6IPT4 315 aa9.85□□□□□ -0.83
TMC1-201ENST00000297784 WDR7Q9Y4E6 1490 aa9.84□□□□□ -0.83
TMC1-201ENST00000297784 ASXL2Q76L83 1435 aa9.84□□□□□ -0.83
TMC1-201ENST00000297784 KCNH8Q96L42 1107 aa9.84□□□□□ -0.83
TMC1-201ENST00000297784 MYO5CQ9NQX4 1742 aa9.83□□□□□ -0.84
TMC1-201ENST00000297784 CAMSAP2Q08AD1 1489 aa9.83□□□□□ -0.84
TMC1-201ENST00000297784 CFDP1Q9UEE9 299 aaPredicted RBP9.82□□□□□ -0.84
TMC1-201ENST00000297784 SAMD9LQ8IVG5 1584 aa9.82□□□□□ -0.84
TMC1-201ENST00000297784 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
TMC1-201ENST00000297784 ABCA9Q8IUA7 1624 aa9.81□□□□□ -0.84
TMC1-201ENST00000297784 ABCC5O15440 1437 aa9.81□□□□□ -0.84
TMC1-201ENST00000297784 DAPK1P53355 1430 aa9.8□□□□□ -0.84
TMC1-201ENST00000297784 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
TMC1-201ENST00000297784 PLCH2O75038 1416 aa9.79□□□□□ -0.84
TMC1-201ENST00000297784 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
TMC1-201ENST00000297784 MAPKBP1O60336 1514 aa9.79□□□□□ -0.84
TMC1-201ENST00000297784 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
TMC1-201ENST00000297784 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
TMC1-201ENST00000297784 ARHGEF12Q9NZN5 1544 aa9.77□□□□□ -0.84
TMC1-201ENST00000297784 KDM6BO15054 1643 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 HFM1A2PYH4 1435 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 NAIPQ13075 1403 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
TMC1-201ENST00000297784 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMC1-201ENST00000297784 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
TMC1-201ENST00000297784 ARAP3Q8WWN8 1544 aa9.76□□□□□ -0.85
TMC1-201ENST00000297784 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMC1-201ENST00000297784 GCC2Q8IWJ2 1684 aa9.76□□□□□ -0.85
TMC1-201ENST00000297784 ARHGEF5Q12774 1597 aa9.75□□□□□ -0.85
TMC1-201ENST00000297784 AKNAQ7Z591 1439 aa9.75□□□□□ -0.85
TMC1-201ENST00000297784 SYCP2Q9BX26 1530 aa9.75□□□□□ -0.85
TMC1-201ENST00000297784 ADGBQ8N7X0 1667 aa9.74□□□□□ -0.85
TMC1-201ENST00000297784 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
TMC1-201ENST00000297784 RRP7BPQ9NSQ0 103 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 ROCK1Q13464 1354 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 ABCC1P33527 1531 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 MAP3K4Q9Y6R4 1608 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
TMC1-201ENST00000297784 ADGRL2O95490 1459 aa9.72□□□□□ -0.85
TMC1-201ENST00000297784 FANCAO15360 1455 aa9.72□□□□□ -0.85
TMC1-201ENST00000297784 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
TMC1-201ENST00000297784 DIP2BQ9P265 1576 aa9.71□□□□□ -0.86
TMC1-201ENST00000297784 GLI2P10070 1586 aa9.71□□□□□ -0.86
TMC1-201ENST00000297784 CCDC141Q6ZP82 1450 aa9.71□□□□□ -0.86
TMC1-201ENST00000297784 CD109Q6YHK3 1445 aa9.7□□□□□ -0.86
TMC1-201ENST00000297784 TRAPPC8Q9Y2L5 1435 aa9.7□□□□□ -0.86
TMC1-201ENST00000297784 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
TMC1-201ENST00000297784 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
TMC1-201ENST00000297784 C9orf84Q5VXU9 1444 aa9.7□□□□□ -0.86
TMC1-201ENST00000297784 MAST1Q9Y2H9 1570 aa9.69□□□□□ -0.86
TMC1-201ENST00000297784 PPRC1Q5VV67 1664 aaKnown RBP9.69□□□□□ -0.86
TMC1-201ENST00000297784 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
TMC1-201ENST00000297784 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
TMC1-201ENST00000297784 DENND4BO75064 1496 aaPredicted RBP9.69□□□□□ -0.86
TMC1-201ENST00000297784 PLEKHH2Q8IVE3 1493 aa9.68□□□□□ -0.86
TMC1-201ENST00000297784 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
TMC1-201ENST00000297784 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
TMC1-201ENST00000297784 ADGRL1O94910 1474 aa9.66□□□□□ -0.86
TMC1-201ENST00000297784 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
TMC1-201ENST00000297784 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
TMC1-201ENST00000297784 PLXNC1O60486 1568 aa9.66□□□□□ -0.86
TMC1-201ENST00000297784 TSPY4P0CV99 314 aa9.65□□□□□ -0.86
TMC1-201ENST00000297784 TSPY10P0CW01 314 aa9.65□□□□□ -0.86
TMC1-201ENST00000297784 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.86
TMC1-201ENST00000297784 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
TMC1-201ENST00000297784 CFAP74Q9C0B2 1584 aa9.65□□□□□ -0.87
TMC1-201ENST00000297784 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.87
TMC1-201ENST00000297784 INO80Q9ULG1 1556 aaPredicted RBP9.64□□□□□ -0.87
TMC1-201ENST00000297784 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
TMC1-201ENST00000297784 ANKRD50Q9ULJ7 1429 aa9.64□□□□□ -0.87
TMC1-201ENST00000297784 KIDINS220Q9ULH0 1771 aa9.64□□□□□ -0.87
TMC1-201ENST00000297784 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
TMC1-201ENST00000297784 KDM5CP41229 1560 aa9.63□□□□□ -0.87
TMC1-201ENST00000297784 NEO1Q92859 1461 aa9.63□□□□□ -0.87
TMC1-201ENST00000297784 RICTORQ6R327 1708 aa9.63□□□□□ -0.87
TMC1-201ENST00000297784 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
TMC1-201ENST00000297784 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
TMC1-201ENST00000297784 POGZQ7Z3K3 1410 aa9.61□□□□□ -0.87
TMC1-201ENST00000297784 PZPP20742 1482 aa9.61□□□□□ -0.87
TMC1-201ENST00000297784 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
TMC1-201ENST00000297784 FRMPD1Q5SYB0 1578 aa9.6□□□□□ -0.87
TMC1-201ENST00000297784 DUOX2Q9NRD8 1548 aa9.6□□□□□ -0.87
TMC1-201ENST00000297784 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
TMC1-201ENST00000297784 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
TMC1-201ENST00000297784 SPAG9O60271 1321 aaKnown RBP9.59□□□□□ -0.87
TMC1-201ENST00000297784 ANP32EQ9BTT0 268 aa9.59□□□□□ -0.87
TMC1-201ENST00000297784 SIN3AQ96ST3 1273 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 TRIM52Q96A61 297 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 KDM5DQ9BY66 1539 aa9.58□□□□□ -0.88
TMC1-201ENST00000297784 UNC13BO14795 1591 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms