RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
CCDC36-201ENST00000296449 FOXD1Q16676 465 aa14□□□□□ -0.17
CCDC36-201ENST00000296449 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
CCDC36-201ENST00000296449 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
CCDC36-201ENST00000296449 MIA2Q96PC5 1412 aa13.99□□□□□ -0.17
CCDC36-201ENST00000296449 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
CCDC36-201ENST00000296449 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
CCDC36-201ENST00000296449 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
CCDC36-201ENST00000296449 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
CCDC36-201ENST00000296449 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
CCDC36-201ENST00000296449 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
CCDC36-201ENST00000296449 B4GALNT3Q6L9W6 998 aa13.96□□□□□ -0.17
CCDC36-201ENST00000296449 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
CCDC36-201ENST00000296449 SPATA31E1Q6ZUB1 1445 aa13.95□□□□□ -0.18
CCDC36-201ENST00000296449 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
CCDC36-201ENST00000296449 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
CCDC36-201ENST00000296449 MYT1LQ9UL68 1186 aa13.94□□□□□ -0.18
CCDC36-201ENST00000296449 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
CCDC36-201ENST00000296449 WDR62O43379 1518 aa13.91□□□□□ -0.18
CCDC36-201ENST00000296449 DAPK1P53355 1430 aa13.91□□□□□ -0.18
CCDC36-201ENST00000296449 IQGAP2Q13576 1575 aa13.9□□□□□ -0.18
CCDC36-201ENST00000296449 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
CCDC36-201ENST00000296449 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
CCDC36-201ENST00000296449 ABCC5O15440 1437 aa13.89□□□□□ -0.19
CCDC36-201ENST00000296449 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
CCDC36-201ENST00000296449 SMG6Q86US8 1419 aaKnown RBP13.88□□□□□ -0.19
CCDC36-201ENST00000296449 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
CCDC36-201ENST00000296449 DNMT1P26358 1616 aaKnown RBP13.88□□□□□ -0.19
CCDC36-201ENST00000296449 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
CCDC36-201ENST00000296449 ZNF644Q9H582 1327 aaPredicted RBP13.85□□□□□ -0.19
CCDC36-201ENST00000296449 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
CCDC36-201ENST00000296449 RNF123Q5XPI4 1314 aa13.84□□□□□ -0.19
CCDC36-201ENST00000296449 PZPP20742 1482 aa13.83□□□□□ -0.2
CCDC36-201ENST00000296449 MBD5Q9P267 1494 aa13.83□□□□□ -0.2
CCDC36-201ENST00000296449 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
CCDC36-201ENST00000296449 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
CCDC36-201ENST00000296449 NOP58Q9Y2X3 529 aaKnown RBP13.81□□□□□ -0.2
CCDC36-201ENST00000296449 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
CCDC36-201ENST00000296449 USP47Q96K76 1375 aa13.8□□□□□ -0.2
CCDC36-201ENST00000296449 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
CCDC36-201ENST00000296449 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
CCDC36-201ENST00000296449 NUP153P49790 1475 aaKnown RBP13.79□□□□□ -0.2
CCDC36-201ENST00000296449 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
CCDC36-201ENST00000296449 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
CCDC36-201ENST00000296449 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
CCDC36-201ENST00000296449 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
CCDC36-201ENST00000296449 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
CCDC36-201ENST00000296449 KIF14Q15058 1648 aa13.77□□□□□ -0.21
CCDC36-201ENST00000296449 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
CCDC36-201ENST00000296449 KDM5CP41229 1560 aa13.76□□□□□ -0.21
CCDC36-201ENST00000296449 DISP1Q96F81 1524 aa13.76□□□□□ -0.21
CCDC36-201ENST00000296449 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
CCDC36-201ENST00000296449 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
CCDC36-201ENST00000296449 CAMSAP2Q08AD1 1489 aa13.75□□□□□ -0.21
CCDC36-201ENST00000296449 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
CCDC36-201ENST00000296449 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
CCDC36-201ENST00000296449 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
CCDC36-201ENST00000296449 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
CCDC36-201ENST00000296449 PKD2Q13563 968 aa13.73□□□□□ -0.21
CCDC36-201ENST00000296449 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
CCDC36-201ENST00000296449 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
CCDC36-201ENST00000296449 NBR1Q14596 966 aa13.72□□□□□ -0.21
CCDC36-201ENST00000296449 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
CCDC36-201ENST00000296449 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
CCDC36-201ENST00000296449 ANP32AP39687 249 aaKnown RBP13.72□□□□□ -0.21
CCDC36-201ENST00000296449 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
CCDC36-201ENST00000296449 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
CCDC36-201ENST00000296449 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
CCDC36-201ENST00000296449 ITSN2Q9NZM3 1697 aa13.71□□□□□ -0.21
CCDC36-201ENST00000296449 TROQ12816 1431 aaPredicted RBP13.71□□□□□ -0.21
CCDC36-201ENST00000296449 RALGAPBQ86X10 1494 aa13.71□□□□□ -0.21
CCDC36-201ENST00000296449 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
CCDC36-201ENST00000296449 CROCC2H7BZ55 1655 aa13.7□□□□□ -0.22
CCDC36-201ENST00000296449 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
CCDC36-201ENST00000296449 KIF15Q9NS87 1388 aa13.69□□□□□ -0.22
CCDC36-201ENST00000296449 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
CCDC36-201ENST00000296449 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
CCDC36-201ENST00000296449 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
CCDC36-201ENST00000296449 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
CCDC36-201ENST00000296449 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
CCDC36-201ENST00000296449 ARHGEF12Q9NZN5 1544 aa13.67□□□□□ -0.22
CCDC36-201ENST00000296449 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
CCDC36-201ENST00000296449 ANKRD50Q9ULJ7 1429 aa13.67□□□□□ -0.22
CCDC36-201ENST00000296449 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
CCDC36-201ENST00000296449 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
CCDC36-201ENST00000296449 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
CCDC36-201ENST00000296449 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
CCDC36-201ENST00000296449 RRP1P56182 461 aaKnown RBP13.65□□□□□ -0.22
CCDC36-201ENST00000296449 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
CCDC36-201ENST00000296449 RALBP1Q15311 655 aa13.64□□□□□ -0.23
CCDC36-201ENST00000296449 E9PCH4 1651 aa13.64□□□□□ -0.23
CCDC36-201ENST00000296449 NUP155O75694 1391 aa13.63□□□□□ -0.23
CCDC36-201ENST00000296449 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
CCDC36-201ENST00000296449 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
CCDC36-201ENST00000296449 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
CCDC36-201ENST00000296449 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
CCDC36-201ENST00000296449 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
CCDC36-201ENST00000296449 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
CCDC36-201ENST00000296449 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
CCDC36-201ENST00000296449 SHANK2Q9UPX8 1470 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms