RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 SCAPERQ9BY12 1400 aa26.5■■□□□ 1.83
TMEM41A-201ENST00000296254 MYO5CQ9NQX4 1742 aa26.5■■□□□ 1.83
TMEM41A-201ENST00000296254 KIF14Q15058 1648 aa26.48■■□□□ 1.83
TMEM41A-201ENST00000296254 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
TMEM41A-201ENST00000296254 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.82
TMEM41A-201ENST00000296254 TROQ12816 1431 aaPredicted RBP26.45■■□□□ 1.82
TMEM41A-201ENST00000296254 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
TMEM41A-201ENST00000296254 EFCAB2Q5VUJ9 269 aa26.41■■□□□ 1.82
TMEM41A-201ENST00000296254 FER1L4A9Z1Z3 1794 aa26.41■■□□□ 1.82
TMEM41A-201ENST00000296254 LRRIQ1Q96JM4 1722 aa26.4■■□□□ 1.82
TMEM41A-201ENST00000296254 CLIP1P30622 1438 aa26.39■■□□□ 1.82
TMEM41A-201ENST00000296254 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
TMEM41A-201ENST00000296254 ATP10AO60312 1499 aa26.39■■□□□ 1.82
TMEM41A-201ENST00000296254 ZNF518AQ6AHZ1 1483 aa26.39■■□□□ 1.82
TMEM41A-201ENST00000296254 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
TMEM41A-201ENST00000296254 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
TMEM41A-201ENST00000296254 KDM5CP41229 1560 aa26.37■■□□□ 1.81
TMEM41A-201ENST00000296254 FBXO41Q8TF61 875 aa26.37■■□□□ 1.81
TMEM41A-201ENST00000296254 MLECQ14165 292 aa26.34■■□□□ 1.81
TMEM41A-201ENST00000296254 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
TMEM41A-201ENST00000296254 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
TMEM41A-201ENST00000296254 HSPA2P54652 639 aa26.3■■□□□ 1.8
TMEM41A-201ENST00000296254 CASKIN1Q8WXD9 1431 aa26.3■■□□□ 1.8
TMEM41A-201ENST00000296254 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
TMEM41A-201ENST00000296254 CDC42BPBQ9Y5S2 1711 aa26.28■■□□□ 1.8
TMEM41A-201ENST00000296254 DIP2CQ9Y2E4 1556 aa26.28■■□□□ 1.8
TMEM41A-201ENST00000296254 REREQ9P2R6 1566 aa26.26■■□□□ 1.79
TMEM41A-201ENST00000296254 ABCC1P33527 1531 aa26.26■■□□□ 1.79
TMEM41A-201ENST00000296254 AFAP1Q8N556 730 aa26.26■■□□□ 1.79
TMEM41A-201ENST00000296254 MLH3Q9UHC1 1453 aa26.23■■□□□ 1.79
TMEM41A-201ENST00000296254 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
TMEM41A-201ENST00000296254 PREX1Q8TCU6 1659 aa26.22■■□□□ 1.79
TMEM41A-201ENST00000296254 FYCO1Q9BQS8 1478 aa26.22■■□□□ 1.79
TMEM41A-201ENST00000296254 ITSN2Q9NZM3 1697 aa26.19■■□□□ 1.78
TMEM41A-201ENST00000296254 TRAPPC8Q9Y2L5 1435 aa26.19■■□□□ 1.78
TMEM41A-201ENST00000296254 CDC42BPAQ5VT25 1732 aa26.17■■□□□ 1.78
TMEM41A-201ENST00000296254 AGLP35573 1532 aa26.15■■□□□ 1.78
TMEM41A-201ENST00000296254 CEBPAP49715 358 aaPredicted RBP26.14■■□□□ 1.78
TMEM41A-201ENST00000296254 MYT1LQ9UL68 1186 aa26.14■■□□□ 1.78
TMEM41A-201ENST00000296254 KIDINS220Q9ULH0 1771 aa26.11■■□□□ 1.77
TMEM41A-201ENST00000296254 UHRF1BP1Q6BDS2 1440 aa26.1■■□□□ 1.77
TMEM41A-201ENST00000296254 SAMD9LQ8IVG5 1584 aa26.08■■□□□ 1.77
TMEM41A-201ENST00000296254 C3P01024 1663 aa26.08■■□□□ 1.77
TMEM41A-201ENST00000296254 SYCP2Q9BX26 1530 aa26.06■■□□□ 1.76
TMEM41A-201ENST00000296254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
TMEM41A-201ENST00000296254 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
TMEM41A-201ENST00000296254 CERKQ8TCT0 537 aa26.03■■□□□ 1.76
TMEM41A-201ENST00000296254 SETD1BQ9UPS6 1966 aaKnown RBP26.03■■□□□ 1.76
TMEM41A-201ENST00000296254 CNTLNQ9NXG0 1405 aa26.01■■□□□ 1.75
TMEM41A-201ENST00000296254 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
TMEM41A-201ENST00000296254 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
TMEM41A-201ENST00000296254 KIAA1107Q9UPP5 1409 aa25.97■■□□□ 1.75
TMEM41A-201ENST00000296254 INO80Q9ULG1 1556 aaPredicted RBP25.96■■□□□ 1.75
TMEM41A-201ENST00000296254 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
TMEM41A-201ENST00000296254 ATP7AQ04656 1500 aa25.96■■□□□ 1.75
TMEM41A-201ENST00000296254 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
TMEM41A-201ENST00000296254 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
TMEM41A-201ENST00000296254 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
TMEM41A-201ENST00000296254 MROH2AA6NES4 1674 aa25.94■■□□□ 1.74
TMEM41A-201ENST00000296254 CCNB3Q8WWL7 1395 aa25.93■■□□□ 1.74
TMEM41A-201ENST00000296254 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
TMEM41A-201ENST00000296254 HNRNPMP52272 730 aaKnown RBP eCLIP25.91■■□□□ 1.74
TMEM41A-201ENST00000296254 CFDP1Q9UEE9 299 aaPredicted RBP25.91■■□□□ 1.74
TMEM41A-201ENST00000296254 PTPRTO14522 1441 aa25.9■■□□□ 1.74
TMEM41A-201ENST00000296254 NPATQ14207 1427 aa25.9■■□□□ 1.74
TMEM41A-201ENST00000296254 SUPT6HQ7KZ85 1726 aaKnown RBP25.89■■□□□ 1.74
TMEM41A-201ENST00000296254 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
TMEM41A-201ENST00000296254 EHBP1L1Q8N3D4 1523 aa25.88■■□□□ 1.73
TMEM41A-201ENST00000296254 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
TMEM41A-201ENST00000296254 A2MP01023 1474 aa25.87■■□□□ 1.73
TMEM41A-201ENST00000296254 ZMYM3Q14202 1370 aa25.83■■□□□ 1.73
TMEM41A-201ENST00000296254 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
TMEM41A-201ENST00000296254 ADGBQ8N7X0 1667 aa25.8■■□□□ 1.72
TMEM41A-201ENST00000296254 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
TMEM41A-201ENST00000296254 MBD5Q9P267 1494 aa25.79■■□□□ 1.72
TMEM41A-201ENST00000296254 CAMSAP1Q5T5Y3 1602 aa25.79■■□□□ 1.72
TMEM41A-201ENST00000296254 LTBP4Q8N2S1 1624 aa25.78■■□□□ 1.72
TMEM41A-201ENST00000296254 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
TMEM41A-201ENST00000296254 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
TMEM41A-201ENST00000296254 ZNF644Q9H582 1327 aaPredicted RBP25.77■■□□□ 1.72
TMEM41A-201ENST00000296254 PTPRKQ15262 1439 aa25.75■■□□□ 1.71
TMEM41A-201ENST00000296254 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
TMEM41A-201ENST00000296254 RTEL1-TNFRSF6BF6WH68 1400 aa25.73■■□□□ 1.71
TMEM41A-201ENST00000296254 GGT6Q6P531 493 aa25.72■■□□□ 1.71
TMEM41A-201ENST00000296254 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
TMEM41A-201ENST00000296254 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
TMEM41A-201ENST00000296254 PPP6R1Q9UPN7 881 aa25.7■■□□□ 1.7
TMEM41A-201ENST00000296254 NCOA2Q15596 1464 aa25.69■■□□□ 1.7
TMEM41A-201ENST00000296254 CCDC141Q6ZP82 1450 aa25.68■■□□□ 1.7
TMEM41A-201ENST00000296254 CAMSAP2Q08AD1 1489 aa25.67■■□□□ 1.7
TMEM41A-201ENST00000296254 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
TMEM41A-201ENST00000296254 DHX29Q7Z478 1369 aaKnown RBP25.66■■□□□ 1.7
TMEM41A-201ENST00000296254 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
TMEM41A-201ENST00000296254 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
TMEM41A-201ENST00000296254 PKD2Q13563 968 aa25.61■■□□□ 1.69
TMEM41A-201ENST00000296254 KDM5DQ9BY66 1539 aa25.61■■□□□ 1.69
TMEM41A-201ENST00000296254 A2ML1A8K2U0 1454 aa25.6■■□□□ 1.69
TMEM41A-201ENST00000296254 ZNF335Q9H4Z2 1342 aaPredicted RBP25.59■■□□□ 1.69
TMEM41A-201ENST00000296254 ARHGEF5Q12774 1597 aa25.58■■□□□ 1.69
TMEM41A-201ENST00000296254 DNMT1P26358 1616 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms