RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 STK26Q9P289 416 aa22.3■■□□□ 1.16
CDCP1-201ENST00000296129 EFCAB2Q5VUJ9 269 aa22.3■■□□□ 1.16
CDCP1-201ENST00000296129 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
CDCP1-201ENST00000296129 SOX12O15370 315 aa22.29■■□□□ 1.16
CDCP1-201ENST00000296129 NCLP19338 710 aaKnown RBP22.29■■□□□ 1.16
CDCP1-201ENST00000296129 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
CDCP1-201ENST00000296129 HNRNPMP52272 730 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDCP1-201ENST00000296129 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
CDCP1-201ENST00000296129 MS4A1P11836 297 aa22.25■■□□□ 1.15
CDCP1-201ENST00000296129 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
CDCP1-201ENST00000296129 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
CDCP1-201ENST00000296129 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
CDCP1-201ENST00000296129 HDGFL2Q7Z4V5 671 aaPredicted RBP22.18■■□□□ 1.14
CDCP1-201ENST00000296129 KIF3BO15066 747 aa22.18■■□□□ 1.14
CDCP1-201ENST00000296129 OS9Q13438 667 aaPredicted RBP22.17■■□□□ 1.14
CDCP1-201ENST00000296129 ANP32EQ9BTT0 268 aa22.17■■□□□ 1.14
CDCP1-201ENST00000296129 L3MBTL2Q969R5 705 aa22.17■■□□□ 1.14
CDCP1-201ENST00000296129 TPRNQ4KMQ1 711 aa22.16■■□□□ 1.14
CDCP1-201ENST00000296129 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
CDCP1-201ENST00000296129 RALBP1Q15311 655 aa22.14■■□□□ 1.14
CDCP1-201ENST00000296129 TRIM44Q96DX7 344 aaPredicted RBP22.13■■□□□ 1.13
CDCP1-201ENST00000296129 EIF3AQ14152 1382 aaKnown RBP22.12■■□□□ 1.13
CDCP1-201ENST00000296129 SPAG9O60271 1321 aaKnown RBP22.12■■□□□ 1.13
CDCP1-201ENST00000296129 NOP58Q9Y2X3 529 aaKnown RBP22.12■■□□□ 1.13
CDCP1-201ENST00000296129 RSPH4AQ5TD94 716 aa22.08■■□□□ 1.12
CDCP1-201ENST00000296129 HSP90AB1P08238 724 aaKnown RBP22.07■■□□□ 1.12
CDCP1-201ENST00000296129 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
CDCP1-201ENST00000296129 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
CDCP1-201ENST00000296129 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
CDCP1-201ENST00000296129 NUTM2DQ5VT03 806 aaPredicted RBP22.07■■□□□ 1.12
CDCP1-201ENST00000296129 DHX57Q6P158 1386 aaKnown RBP22.05■■□□□ 1.12
CDCP1-201ENST00000296129 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
CDCP1-201ENST00000296129 NPHP1O15259 732 aa22.03■■□□□ 1.12
CDCP1-201ENST00000296129 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
CDCP1-201ENST00000296129 ZRSR1Q15695 479 aaKnown RBP22.03■■□□□ 1.12
CDCP1-201ENST00000296129 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
CDCP1-201ENST00000296129 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.12
CDCP1-201ENST00000296129 PTMAP06454 111 aaKnown RBP22■■□□□ 1.11
CDCP1-201ENST00000296129 TAOK2Q9UL54 1235 aa22■■□□□ 1.11
CDCP1-201ENST00000296129 KCNJ4P48050 445 aa22■■□□□ 1.11
CDCP1-201ENST00000296129 CDK11BP21127 795 aaKnown RBP21.99■■□□□ 1.11
CDCP1-201ENST00000296129 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
CDCP1-201ENST00000296129 FGD1P98174 961 aa21.97■■□□□ 1.11
CDCP1-201ENST00000296129 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
CDCP1-201ENST00000296129 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CDCP1-201ENST00000296129 GLIPR1L2Q4G1C9 344 aa21.96■■□□□ 1.11
CDCP1-201ENST00000296129 CCDC144AA2RUR9 1427 aa21.95■■□□□ 1.1
CDCP1-201ENST00000296129 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
CDCP1-201ENST00000296129 PTPRGP23470 1445 aa21.95■■□□□ 1.1
CDCP1-201ENST00000296129 CCDC146Q8IYE0 955 aa21.95■■□□□ 1.1
CDCP1-201ENST00000296129 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
CDCP1-201ENST00000296129 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
CDCP1-201ENST00000296129 APBB1O00213 710 aa21.93■■□□□ 1.1
CDCP1-201ENST00000296129 TERF2IPQ9NYB0 399 aa21.93■■□□□ 1.1
CDCP1-201ENST00000296129 NAP1L2Q9ULW6 460 aaPredicted RBP21.93■■□□□ 1.1
CDCP1-201ENST00000296129 IGF1RP08069 1367 aa21.93■■□□□ 1.1
CDCP1-201ENST00000296129 SPRYD3Q8NCJ5 442 aa21.92■■□□□ 1.1
CDCP1-201ENST00000296129 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
CDCP1-201ENST00000296129 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
CDCP1-201ENST00000296129 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
CDCP1-201ENST00000296129 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
CDCP1-201ENST00000296129 ERICH6BQ5W0A0 696 aa21.9■■□□□ 1.1
CDCP1-201ENST00000296129 ST20-MTHFSA0A0A6YYL1 179 aa21.89■■□□□ 1.1
CDCP1-201ENST00000296129 KIF15Q9NS87 1388 aa21.89■■□□□ 1.09
CDCP1-201ENST00000296129 MCCP23508 829 aa21.88■■□□□ 1.09
CDCP1-201ENST00000296129 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
CDCP1-201ENST00000296129 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
CDCP1-201ENST00000296129 RWDD1Q9H446 243 aaPredicted RBP21.86■■□□□ 1.09
CDCP1-201ENST00000296129 PLCB2Q00722 1185 aa21.86■■□□□ 1.09
CDCP1-201ENST00000296129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDCP1-201ENST00000296129 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
CDCP1-201ENST00000296129 PANK3Q9H999 370 aa21.84■■□□□ 1.09
CDCP1-201ENST00000296129 DNTTIP2Q5QJE6 756 aaKnown RBP21.84■■□□□ 1.09
CDCP1-201ENST00000296129 MYBBP1AQ9BQG0 1328 aaKnown RBP21.83■■□□□ 1.09
CDCP1-201ENST00000296129 UACAQ9BZF9 1416 aa21.82■■□□□ 1.08
CDCP1-201ENST00000296129 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
CDCP1-201ENST00000296129 KIF21BO75037 1637 aa21.81■■□□□ 1.08
CDCP1-201ENST00000296129 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
CDCP1-201ENST00000296129 NGDNQ8NEJ9 315 aaKnown RBP21.81■■□□□ 1.08
CDCP1-201ENST00000296129 NUTM2FA1L443 756 aa21.8■■□□□ 1.08
CDCP1-201ENST00000296129 USP47Q96K76 1375 aa21.8■■□□□ 1.08
CDCP1-201ENST00000296129 PMFBP1Q8TBY8 1022 aa21.79■■□□□ 1.08
CDCP1-201ENST00000296129 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
CDCP1-201ENST00000296129 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
CDCP1-201ENST00000296129 TULP1O00294 542 aaPredicted RBP21.78■■□□□ 1.08
CDCP1-201ENST00000296129 CENPJQ9HC77 1338 aaPredicted RBP21.78■■□□□ 1.08
CDCP1-201ENST00000296129 CUX1P39880 1505 aa21.78■■□□□ 1.08
CDCP1-201ENST00000296129 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
CDCP1-201ENST00000296129 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
CDCP1-201ENST00000296129 PDE3BQ13370 1112 aa21.77■■□□□ 1.08
CDCP1-201ENST00000296129 CLUAP1Q96AJ1 413 aa21.77■■□□□ 1.08
CDCP1-201ENST00000296129 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
CDCP1-201ENST00000296129 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
CDCP1-201ENST00000296129 MYOM3Q5VTT5 1437 aa21.76■■□□□ 1.07
CDCP1-201ENST00000296129 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.077e-7■■□□□ 13.1
CDCP1-201ENST00000296129 GOLGA6L4A6NEF3 574 aa21.75■■□□□ 1.07
CDCP1-201ENST00000296129 RRP7AQ9Y3A4 280 aaKnown RBP21.75■■□□□ 1.07
CDCP1-201ENST00000296129 RTN4Q9NQC3 1192 aaKnown RBP21.75■■□□□ 1.07
CDCP1-201ENST00000296129 AMPHP49418 695 aa21.74■■□□□ 1.07
CDCP1-201ENST00000296129 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms