RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
CNOT9-202ENST00000295701 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
CNOT9-202ENST00000295701 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
CNOT9-202ENST00000295701 RAPGEF6Q8TEU7 1601 aa15.68■□□□□ 0.1
CNOT9-202ENST00000295701 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
CNOT9-202ENST00000295701 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
CNOT9-202ENST00000295701 ABCA9Q8IUA7 1624 aa15.66■□□□□ 0.1
CNOT9-202ENST00000295701 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
CNOT9-202ENST00000295701 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
CNOT9-202ENST00000295701 POTEHQ6S545 545 aa15.59■□□□□ 0.09
CNOT9-202ENST00000295701 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
CNOT9-202ENST00000295701 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.09
CNOT9-202ENST00000295701 NEO1Q92859 1461 aa15.58■□□□□ 0.08
CNOT9-202ENST00000295701 EEA1Q15075 1411 aa15.57■□□□□ 0.08
CNOT9-202ENST00000295701 ADAMTSL3P82987 1691 aa15.57■□□□□ 0.08
CNOT9-202ENST00000295701 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
CNOT9-202ENST00000295701 PTPRMP28827 1452 aa15.54■□□□□ 0.08
CNOT9-202ENST00000295701 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
CNOT9-202ENST00000295701 BCORL1Q5H9F3 1711 aa15.52■□□□□ 0.08
CNOT9-202ENST00000295701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.07
CNOT9-202ENST00000295701 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
CNOT9-202ENST00000295701 RICTORQ6R327 1708 aa15.51■□□□□ 0.07
CNOT9-202ENST00000295701 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
CNOT9-202ENST00000295701 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
CNOT9-202ENST00000295701 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
CNOT9-202ENST00000295701 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
CNOT9-202ENST00000295701 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
CNOT9-202ENST00000295701 FANCAO15360 1455 aa15.47■□□□□ 0.07
CNOT9-202ENST00000295701 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
CNOT9-202ENST00000295701 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
CNOT9-202ENST00000295701 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.07
CNOT9-202ENST00000295701 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
CNOT9-202ENST00000295701 RIMS1Q86UR5 1692 aaKnown RBP15.46■□□□□ 0.07
CNOT9-202ENST00000295701 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
CNOT9-202ENST00000295701 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
CNOT9-202ENST00000295701 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
CNOT9-202ENST00000295701 MLECQ14165 292 aa15.42■□□□□ 0.06
CNOT9-202ENST00000295701 SCAPERQ9BY12 1400 aa15.41■□□□□ 0.06
CNOT9-202ENST00000295701 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
CNOT9-202ENST00000295701 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
CNOT9-202ENST00000295701 MKRN4PQ13434 485 aaPredicted RBP15.4■□□□□ 0.06
CNOT9-202ENST00000295701 PLCH2O75038 1416 aa15.4■□□□□ 0.06
CNOT9-202ENST00000295701 PCF11O94913 1555 aaKnown RBP15.4■□□□□ 0.06
CNOT9-202ENST00000295701 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
CNOT9-202ENST00000295701 ZMYM4Q5VZL5 1548 aa15.39■□□□□ 0.05
CNOT9-202ENST00000295701 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
CNOT9-202ENST00000295701 HSPA2P54652 639 aa15.39■□□□□ 0.05
CNOT9-202ENST00000295701 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
CNOT9-202ENST00000295701 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
CNOT9-202ENST00000295701 KIF14Q15058 1648 aa15.36■□□□□ 0.05
CNOT9-202ENST00000295701 LRRIQ1Q96JM4 1722 aa15.36■□□□□ 0.05
CNOT9-202ENST00000295701 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
CNOT9-202ENST00000295701 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
CNOT9-202ENST00000295701 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
CNOT9-202ENST00000295701 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
CNOT9-202ENST00000295701 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
CNOT9-202ENST00000295701 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
CNOT9-202ENST00000295701 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
CNOT9-202ENST00000295701 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
CNOT9-202ENST00000295701 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
CNOT9-202ENST00000295701 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
CNOT9-202ENST00000295701 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
CNOT9-202ENST00000295701 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-202ENST00000295701 CEBPAP49715 358 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-202ENST00000295701 ATP10AO60312 1499 aa15.31■□□□□ 0.04
CNOT9-202ENST00000295701 TROQ12816 1431 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-202ENST00000295701 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
CNOT9-202ENST00000295701 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
CNOT9-202ENST00000295701 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.04
CNOT9-202ENST00000295701 C9orf84Q5VXU9 1444 aa15.27■□□□□ 0.04
CNOT9-202ENST00000295701 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
CNOT9-202ENST00000295701 CLIP1P30622 1438 aa15.25■□□□□ 0.03
CNOT9-202ENST00000295701 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
CNOT9-202ENST00000295701 KDM5CP41229 1560 aa15.24■□□□□ 0.03
CNOT9-202ENST00000295701 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
CNOT9-202ENST00000295701 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
CNOT9-202ENST00000295701 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
CNOT9-202ENST00000295701 ABCA6Q8N139 1617 aa15.21■□□□□ 0.02
CNOT9-202ENST00000295701 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
CNOT9-202ENST00000295701 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
CNOT9-202ENST00000295701 PREX1Q8TCU6 1659 aa15.19■□□□□ 0.02
CNOT9-202ENST00000295701 CERKQ8TCT0 537 aa15.19■□□□□ 0.02
CNOT9-202ENST00000295701 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
CNOT9-202ENST00000295701 CDC42BPAQ5VT25 1732 aa15.19■□□□□ 0.02
CNOT9-202ENST00000295701 ITSN2Q9NZM3 1697 aa15.18■□□□□ 0.02
CNOT9-202ENST00000295701 STRCQ7RTU9 1775 aa15.18■□□□□ 0.02
CNOT9-202ENST00000295701 ABCC1P33527 1531 aa15.17■□□□□ 0.02
CNOT9-202ENST00000295701 MLH3Q9UHC1 1453 aa15.17■□□□□ 0.02
CNOT9-202ENST00000295701 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
CNOT9-202ENST00000295701 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
CNOT9-202ENST00000295701 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
CNOT9-202ENST00000295701 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
CNOT9-202ENST00000295701 C3P01024 1663 aa15.16■□□□□ 0.02
CNOT9-202ENST00000295701 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
CNOT9-202ENST00000295701 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.01
CNOT9-202ENST00000295701 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
CNOT9-202ENST00000295701 UHRF1BP1Q6BDS2 1440 aa15.12■□□□□ 0.01
CNOT9-202ENST00000295701 AGLP35573 1532 aa15.12■□□□□ 0.01
CNOT9-202ENST00000295701 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
CNOT9-202ENST00000295701 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms