RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
CCDC140-201ENST00000295226 ARHGAP5Q13017 1502 aa23.2■■□□□ 1.31
CCDC140-201ENST00000295226 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
CCDC140-201ENST00000295226 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
CCDC140-201ENST00000295226 ITSN2Q9NZM3 1697 aa23.18■■□□□ 1.3
CCDC140-201ENST00000295226 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
CCDC140-201ENST00000295226 MIA2Q96PC5 1412 aa23.15■■□□□ 1.3
CCDC140-201ENST00000295226 FANCAO15360 1455 aa23.14■■□□□ 1.3
CCDC140-201ENST00000295226 PTPN23Q9H3S7 1636 aa23.14■■□□□ 1.29
CCDC140-201ENST00000295226 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
CCDC140-201ENST00000295226 PPRC1Q5VV67 1664 aaKnown RBP23.12■■□□□ 1.29
CCDC140-201ENST00000295226 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
CCDC140-201ENST00000295226 HNRNPMP52272 730 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC140-201ENST00000295226 CAMSAP2Q08AD1 1489 aa23.11■■□□□ 1.29
CCDC140-201ENST00000295226 ITGAEP38570 1179 aa23.1■■□□□ 1.29
CCDC140-201ENST00000295226 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
CCDC140-201ENST00000295226 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
CCDC140-201ENST00000295226 TCOF1Q13428 1488 aaKnown RBP23.08■■□□□ 1.28
CCDC140-201ENST00000295226 AKNAQ7Z591 1439 aa23.07■■□□□ 1.28
CCDC140-201ENST00000295226 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
CCDC140-201ENST00000295226 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
CCDC140-201ENST00000295226 ADGRL1O94910 1474 aa23.03■■□□□ 1.28
CCDC140-201ENST00000295226 TEX14Q8IWB6 1497 aa23.03■■□□□ 1.28
CCDC140-201ENST00000295226 SCAPERQ9BY12 1400 aa23.03■■□□□ 1.28
CCDC140-201ENST00000295226 NEO1Q92859 1461 aa23.02■■□□□ 1.28
CCDC140-201ENST00000295226 ABCC1P33527 1531 aa23.01■■□□□ 1.27
CCDC140-201ENST00000295226 AFAP1Q8N556 730 aa23■■□□□ 1.27
CCDC140-201ENST00000295226 MBD5Q9P267 1494 aa23■■□□□ 1.27
CCDC140-201ENST00000295226 CFAP74Q9C0B2 1584 aa23■■□□□ 1.27
CCDC140-201ENST00000295226 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
CCDC140-201ENST00000295226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCDC140-201ENST00000295226 RAPGEF3O95398 923 aa22.99■■□□□ 1.27
CCDC140-201ENST00000295226 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
CCDC140-201ENST00000295226 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
CCDC140-201ENST00000295226 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
CCDC140-201ENST00000295226 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
CCDC140-201ENST00000295226 ABCC5O15440 1437 aa22.97■■□□□ 1.27
CCDC140-201ENST00000295226 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
CCDC140-201ENST00000295226 DAPK1P53355 1430 aa22.95■■□□□ 1.26
CCDC140-201ENST00000295226 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
CCDC140-201ENST00000295226 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
CCDC140-201ENST00000295226 DENND4BO75064 1496 aaPredicted RBP22.92■■□□□ 1.26
CCDC140-201ENST00000295226 ARHGEF5Q12774 1597 aa22.92■■□□□ 1.26
CCDC140-201ENST00000295226 CCDC141Q6ZP82 1450 aa22.91■■□□□ 1.26
CCDC140-201ENST00000295226 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
CCDC140-201ENST00000295226 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
CCDC140-201ENST00000295226 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
CCDC140-201ENST00000295226 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
CCDC140-201ENST00000295226 MYT1LQ9UL68 1186 aa22.88■■□□□ 1.25
CCDC140-201ENST00000295226 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
CCDC140-201ENST00000295226 RICTORQ6R327 1708 aa22.86■■□□□ 1.25
CCDC140-201ENST00000295226 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
CCDC140-201ENST00000295226 ZNF518AQ6AHZ1 1483 aa22.86■■□□□ 1.25
CCDC140-201ENST00000295226 C9orf84Q5VXU9 1444 aa22.86■■□□□ 1.25
CCDC140-201ENST00000295226 CROCC2H7BZ55 1655 aa22.85■■□□□ 1.25
CCDC140-201ENST00000295226 FRMPD1Q5SYB0 1578 aa22.85■■□□□ 1.25
CCDC140-201ENST00000295226 KDM6BO15054 1643 aa22.8■■□□□ 1.24
CCDC140-201ENST00000295226 KDM5CP41229 1560 aa22.8■■□□□ 1.24
CCDC140-201ENST00000295226 SHANK2Q9UPX8 1470 aa22.8■■□□□ 1.24
CCDC140-201ENST00000295226 NCOA1Q15788 1441 aa22.77■■□□□ 1.24
CCDC140-201ENST00000295226 ZFYVE16Q7Z3T8 1539 aa22.77■■□□□ 1.24
CCDC140-201ENST00000295226 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.24
CCDC140-201ENST00000295226 KIDINS220Q9ULH0 1771 aa22.77■■□□□ 1.24
CCDC140-201ENST00000295226 ATP7AQ04656 1500 aa22.76■■□□□ 1.23
CCDC140-201ENST00000295226 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
CCDC140-201ENST00000295226 YEATS2Q9ULM3 1422 aa22.75■■□□□ 1.23
CCDC140-201ENST00000295226 MLH3Q9UHC1 1453 aa22.75■■□□□ 1.23
CCDC140-201ENST00000295226 INO80Q9ULG1 1556 aaPredicted RBP22.75■■□□□ 1.23
CCDC140-201ENST00000295226 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
CCDC140-201ENST00000295226 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
CCDC140-201ENST00000295226 HECW2Q9P2P5 1572 aa22.74■■□□□ 1.23
CCDC140-201ENST00000295226 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
CCDC140-201ENST00000295226 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
CCDC140-201ENST00000295226 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
CCDC140-201ENST00000295226 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
CCDC140-201ENST00000295226 ZMYM4Q5VZL5 1548 aa22.72■■□□□ 1.23
CCDC140-201ENST00000295226 NAIPQ13075 1403 aa22.71■■□□□ 1.23
CCDC140-201ENST00000295226 ABCA6Q8N139 1617 aa22.69■■□□□ 1.22
CCDC140-201ENST00000295226 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
CCDC140-201ENST00000295226 PLXNC1O60486 1568 aa22.68■■□□□ 1.22
CCDC140-201ENST00000295226 SETD5Q9C0A6 1442 aa22.67■■□□□ 1.22
CCDC140-201ENST00000295226 MAGI2Q86UL8 1455 aa22.66■■□□□ 1.22
CCDC140-201ENST00000295226 DIP2CQ9Y2E4 1556 aa22.66■■□□□ 1.22
CCDC140-201ENST00000295226 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.21
CCDC140-201ENST00000295226 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
CCDC140-201ENST00000295226 A2MP01023 1474 aa22.63■■□□□ 1.21
CCDC140-201ENST00000295226 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
CCDC140-201ENST00000295226 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
CCDC140-201ENST00000295226 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
CCDC140-201ENST00000295226 ATP10AO60312 1499 aa22.61■■□□□ 1.21
CCDC140-201ENST00000295226 ARHGEF40Q8TER5 1519 aa22.6■■□□□ 1.21
CCDC140-201ENST00000295226 KIF3BO15066 747 aa22.58■■□□□ 1.21
CCDC140-201ENST00000295226 SIGLEC1Q9BZZ2 1709 aa22.56■■□□□ 1.2
CCDC140-201ENST00000295226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCDC140-201ENST00000295226 ERBINQ96RT1 1412 aa22.55■■□□□ 1.2
CCDC140-201ENST00000295226 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
CCDC140-201ENST00000295226 ARID4BQ4LE39 1312 aaPredicted RBP22.52■■□□□ 1.2
CCDC140-201ENST00000295226 MLECQ14165 292 aa22.52■■□□□ 1.2
CCDC140-201ENST00000295226 GGT6Q6P531 493 aa22.52■■□□□ 1.2
CCDC140-201ENST00000295226 HRCP23327 699 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms