RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 DAPK1P53355 1430 aa13.57□□□□□ -0.24
PDPN-201ENST00000294489 NAIPQ13075 1403 aa13.57□□□□□ -0.24
PDPN-201ENST00000294489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDPN-201ENST00000294489 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
PDPN-201ENST00000294489 ROCK1Q13464 1354 aa13.56□□□□□ -0.24
PDPN-201ENST00000294489 ITGAEP38570 1179 aa13.56□□□□□ -0.24
PDPN-201ENST00000294489 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
PDPN-201ENST00000294489 ABCC5O15440 1437 aa13.56□□□□□ -0.24
PDPN-201ENST00000294489 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
PDPN-201ENST00000294489 MAPKBP1O60336 1514 aa13.55□□□□□ -0.24
PDPN-201ENST00000294489 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
PDPN-201ENST00000294489 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
PDPN-201ENST00000294489 SHANK2Q9UPX8 1470 aa13.53□□□□□ -0.24
PDPN-201ENST00000294489 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
PDPN-201ENST00000294489 KDM6BO15054 1643 aa13.5□□□□□ -0.25
PDPN-201ENST00000294489 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
PDPN-201ENST00000294489 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
PDPN-201ENST00000294489 ABCA9Q8IUA7 1624 aa13.49□□□□□ -0.25
PDPN-201ENST00000294489 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
PDPN-201ENST00000294489 WDR7Q9Y4E6 1490 aa13.48□□□□□ -0.25
PDPN-201ENST00000294489 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
PDPN-201ENST00000294489 PLCH2O75038 1416 aa13.46□□□□□ -0.25
PDPN-201ENST00000294489 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.25
PDPN-201ENST00000294489 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
PDPN-201ENST00000294489 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
PDPN-201ENST00000294489 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
PDPN-201ENST00000294489 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
PDPN-201ENST00000294489 CCDC141Q6ZP82 1450 aa13.42□□□□□ -0.26
PDPN-201ENST00000294489 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
PDPN-201ENST00000294489 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
PDPN-201ENST00000294489 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
PDPN-201ENST00000294489 ABCC1P33527 1531 aa13.42□□□□□ -0.26
PDPN-201ENST00000294489 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
PDPN-201ENST00000294489 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
PDPN-201ENST00000294489 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
PDPN-201ENST00000294489 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
PDPN-201ENST00000294489 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
PDPN-201ENST00000294489 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
PDPN-201ENST00000294489 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
PDPN-201ENST00000294489 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
PDPN-201ENST00000294489 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
PDPN-201ENST00000294489 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
PDPN-201ENST00000294489 KDM5DQ9BY66 1539 aa13.37□□□□□ -0.27
PDPN-201ENST00000294489 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
PDPN-201ENST00000294489 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
PDPN-201ENST00000294489 CFAP74Q9C0B2 1584 aa13.34□□□□□ -0.27
PDPN-201ENST00000294489 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
PDPN-201ENST00000294489 PZPP20742 1482 aa13.33□□□□□ -0.27
PDPN-201ENST00000294489 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.27
PDPN-201ENST00000294489 KCNH8Q96L42 1107 aa13.33□□□□□ -0.27
PDPN-201ENST00000294489 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
PDPN-201ENST00000294489 UNC13BO14795 1591 aa13.32□□□□□ -0.28
PDPN-201ENST00000294489 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
PDPN-201ENST00000294489 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
PDPN-201ENST00000294489 GLI2P10070 1586 aa13.32□□□□□ -0.28
PDPN-201ENST00000294489 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
PDPN-201ENST00000294489 RTEL1-TNFRSF6BF6WH68 1400 aa13.31□□□□□ -0.28
PDPN-201ENST00000294489 FANCAO15360 1455 aa13.31□□□□□ -0.28
PDPN-201ENST00000294489 MAP3K4Q9Y6R4 1608 aa13.3□□□□□ -0.28
PDPN-201ENST00000294489 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
PDPN-201ENST00000294489 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
PDPN-201ENST00000294489 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
PDPN-201ENST00000294489 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
PDPN-201ENST00000294489 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
PDPN-201ENST00000294489 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
PDPN-201ENST00000294489 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDPN-201ENST00000294489 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
PDPN-201ENST00000294489 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
PDPN-201ENST00000294489 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
PDPN-201ENST00000294489 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
PDPN-201ENST00000294489 IQGAP3Q86VI3 1631 aa13.26□□□□□ -0.29
PDPN-201ENST00000294489 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
PDPN-201ENST00000294489 KDM5CP41229 1560 aa13.25□□□□□ -0.29
PDPN-201ENST00000294489 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
PDPN-201ENST00000294489 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
PDPN-201ENST00000294489 ATP7AQ04656 1500 aa13.24□□□□□ -0.29
PDPN-201ENST00000294489 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
PDPN-201ENST00000294489 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
PDPN-201ENST00000294489 NEO1Q92859 1461 aa13.23□□□□□ -0.29
PDPN-201ENST00000294489 KIDINS220Q9ULH0 1771 aa13.23□□□□□ -0.29
PDPN-201ENST00000294489 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
PDPN-201ENST00000294489 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
PDPN-201ENST00000294489 DIP2BQ9P265 1576 aa13.22□□□□□ -0.29
PDPN-201ENST00000294489 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.29
PDPN-201ENST00000294489 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
PDPN-201ENST00000294489 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.3
PDPN-201ENST00000294489 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
PDPN-201ENST00000294489 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
PDPN-201ENST00000294489 PPRC1Q5VV67 1664 aaKnown RBP13.2□□□□□ -0.3
PDPN-201ENST00000294489 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
PDPN-201ENST00000294489 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
PDPN-201ENST00000294489 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
PDPN-201ENST00000294489 VWDEQ8N2E2 1590 aa13.19□□□□□ -0.3
PDPN-201ENST00000294489 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
PDPN-201ENST00000294489 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
PDPN-201ENST00000294489 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
PDPN-201ENST00000294489 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
PDPN-201ENST00000294489 NUP155O75694 1391 aa13.17□□□□□ -0.3
PDPN-201ENST00000294489 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
PDPN-201ENST00000294489 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms