RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 APBB1O00213 710 aa17.34■□□□□ 0.37
TRAPPC10-201ENST00000291574 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.37
TRAPPC10-201ENST00000291574 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
TRAPPC10-201ENST00000291574 KTN1Q86UP2 1357 aaKnown RBP17.33■□□□□ 0.36
TRAPPC10-201ENST00000291574 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC10-201ENST00000291574 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC10-201ENST00000291574 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC10-201ENST00000291574 CARMIL1Q5VZK9 1371 aa17.31■□□□□ 0.36
TRAPPC10-201ENST00000291574 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.362e-6■■■□□ 17.9
TRAPPC10-201ENST00000291574 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
TRAPPC10-201ENST00000291574 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
TRAPPC10-201ENST00000291574 SOX12O15370 315 aa17.27■□□□□ 0.36
TRAPPC10-201ENST00000291574 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.35
TRAPPC10-201ENST00000291574 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.35
TRAPPC10-201ENST00000291574 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 RALBP1Q15311 655 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 NRDCO43847 1150 aa17.26■□□□□ 0.35
TRAPPC10-201ENST00000291574 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
TRAPPC10-201ENST00000291574 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC10-201ENST00000291574 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
TRAPPC10-201ENST00000291574 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
TRAPPC10-201ENST00000291574 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
TRAPPC10-201ENST00000291574 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
TRAPPC10-201ENST00000291574 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
TRAPPC10-201ENST00000291574 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC10-201ENST00000291574 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC10-201ENST00000291574 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAPPC10-201ENST00000291574 CUX2O14529 1486 aa17.23■□□□□ 0.35
TRAPPC10-201ENST00000291574 MCCP23508 829 aa17.23■□□□□ 0.35
TRAPPC10-201ENST00000291574 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
TRAPPC10-201ENST00000291574 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
TRAPPC10-201ENST00000291574 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
TRAPPC10-201ENST00000291574 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
TRAPPC10-201ENST00000291574 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
TRAPPC10-201ENST00000291574 PDE4AP27815 886 aa17.19■□□□□ 0.34
TRAPPC10-201ENST00000291574 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
TRAPPC10-201ENST00000291574 PLIN1O60240 522 aa17.18■□□□□ 0.34
TRAPPC10-201ENST00000291574 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
TRAPPC10-201ENST00000291574 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
TRAPPC10-201ENST00000291574 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC10-201ENST00000291574 PMFBP1Q8TBY8 1022 aa17.16■□□□□ 0.34
TRAPPC10-201ENST00000291574 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC10-201ENST00000291574 EXOC6Q8TAG9 804 aa17.16■□□□□ 0.34
TRAPPC10-201ENST00000291574 STK26Q9P289 416 aa17.15■□□□□ 0.34
TRAPPC10-201ENST00000291574 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
TRAPPC10-201ENST00000291574 NUP155O75694 1391 aa17.15■□□□□ 0.34
TRAPPC10-201ENST00000291574 SMC4Q9NTJ3 1288 aa17.14■□□□□ 0.33
TRAPPC10-201ENST00000291574 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
TRAPPC10-201ENST00000291574 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
TRAPPC10-201ENST00000291574 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
TRAPPC10-201ENST00000291574 GSE1Q14687 1217 aa17.13■□□□□ 0.33
TRAPPC10-201ENST00000291574 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
TRAPPC10-201ENST00000291574 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC10-201ENST00000291574 PTMSP20962 102 aa17.12■□□□□ 0.33
TRAPPC10-201ENST00000291574 KIAA1211Q6ZU35 1233 aa17.12■□□□□ 0.33
TRAPPC10-201ENST00000291574 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
TRAPPC10-201ENST00000291574 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
TRAPPC10-201ENST00000291574 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC10-201ENST00000291574 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
TRAPPC10-201ENST00000291574 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
TRAPPC10-201ENST00000291574 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC10-201ENST00000291574 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 GGT6Q6P531 493 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 KANK1Q14678 1352 aa17.07■□□□□ 0.32
TRAPPC10-201ENST00000291574 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
TRAPPC10-201ENST00000291574 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
TRAPPC10-201ENST00000291574 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
TRAPPC10-201ENST00000291574 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
TRAPPC10-201ENST00000291574 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC10-201ENST00000291574 NACADO15069 1562 aa17.04■□□□□ 0.32
TRAPPC10-201ENST00000291574 HDGFL2Q7Z4V5 671 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC10-201ENST00000291574 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
TRAPPC10-201ENST00000291574 TRIM6-TRIM34B2RNG4 842 aa17.03■□□□□ 0.32
TRAPPC10-201ENST00000291574 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
TRAPPC10-201ENST00000291574 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
TRAPPC10-201ENST00000291574 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
TRAPPC10-201ENST00000291574 MLECQ14165 292 aa17.01■□□□□ 0.31
TRAPPC10-201ENST00000291574 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
TRAPPC10-201ENST00000291574 PANK3Q9H999 370 aa17■□□□□ 0.31
TRAPPC10-201ENST00000291574 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
TRAPPC10-201ENST00000291574 COG6Q9Y2V7 657 aa17■□□□□ 0.31
TRAPPC10-201ENST00000291574 KIF15Q9NS87 1388 aa17■□□□□ 0.31
TRAPPC10-201ENST00000291574 ANKRD30AQ9BXX3 1397 aa16.99■□□□□ 0.31
TRAPPC10-201ENST00000291574 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
TRAPPC10-201ENST00000291574 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC10-201ENST00000291574 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC10-201ENST00000291574 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
TRAPPC10-201ENST00000291574 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
TRAPPC10-201ENST00000291574 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC10-201ENST00000291574 NPHP1O15259 732 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms