RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 ABCC5O15440 1437 aa27.42■■□□□ 1.98
SHF-201ENST00000290894 FOXD1Q16676 465 aa27.39■■□□□ 1.97
SHF-201ENST00000290894 PLEKHD1A6NEE1 506 aa27.38■■□□□ 1.97
SHF-201ENST00000290894 ABCA8O94911 1581 aa27.38■■□□□ 1.97
SHF-201ENST00000290894 TIMELESSQ9UNS1 1208 aa27.38■■□□□ 1.97
SHF-201ENST00000290894 ATP10BO94823 1461 aa27.37■■□□□ 1.97
SHF-201ENST00000290894 GPATCH8Q9UKJ3 1502 aaKnown RBP27.37■■□□□ 1.97
SHF-201ENST00000290894 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
SHF-201ENST00000290894 PTPRGP23470 1445 aa27.36■■□□□ 1.97
SHF-201ENST00000290894 DENND4BO75064 1496 aaPredicted RBP27.35■■□□□ 1.97
SHF-201ENST00000290894 AKNAQ7Z591 1439 aa27.35■■□□□ 1.97
SHF-201ENST00000290894 CAMSAP2Q08AD1 1489 aa27.35■■□□□ 1.97
SHF-201ENST00000290894 MPHOSPH9Q99550 1183 aa27.33■■□□□ 1.97
SHF-201ENST00000290894 ITSN2Q9NZM3 1697 aa27.28■■□□□ 1.96
SHF-201ENST00000290894 ADCY10Q96PN6 1610 aa27.28■■□□□ 1.96
SHF-201ENST00000290894 ROCK1Q13464 1354 aa27.27■■□□□ 1.96
SHF-201ENST00000290894 DDX10Q13206 875 aaKnown RBP27.26■■□□□ 1.95
SHF-201ENST00000290894 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
SHF-201ENST00000290894 GTF3C3Q9Y5Q9 886 aa27.23■■□□□ 1.95
SHF-201ENST00000290894 CDC42BPAQ5VT25 1732 aa27.21■■□□□ 1.95
SHF-201ENST00000290894 ABCC10Q5T3U5 1492 aa27.19■■□□□ 1.94
SHF-201ENST00000290894 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
SHF-201ENST00000290894 NCOA1Q15788 1441 aa27.18■■□□□ 1.94
SHF-201ENST00000290894 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
SHF-201ENST00000290894 HNRNPMP52272 730 aaKnown RBP eCLIP27.14■■□□□ 1.944e-24■□□□□ 9.7
SHF-201ENST00000290894 SHROOM2Q13796 1616 aa27.14■■□□□ 1.93
SHF-201ENST00000290894 KCNH8Q96L42 1107 aa27.12■■□□□ 1.93
SHF-201ENST00000290894 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
SHF-201ENST00000290894 CROCC2H7BZ55 1655 aa27.09■■□□□ 1.93
SHF-201ENST00000290894 ADGBQ8N7X0 1667 aa27.09■■□□□ 1.93
SHF-201ENST00000290894 MYT1Q01538 1121 aa27.09■■□□□ 1.93
SHF-201ENST00000290894 ANKRD30AQ9BXX3 1397 aa27.08■■□□□ 1.93
SHF-201ENST00000290894 ANKRD30BQ9BXX2 1392 aa27.07■■□□□ 1.92
SHF-201ENST00000290894 C9orf84Q5VXU9 1444 aa27.04■■□□□ 1.92
SHF-201ENST00000290894 TSPY4P0CV99 314 aa27.04■■□□□ 1.92
SHF-201ENST00000290894 TSPY10P0CW01 314 aa27.04■■□□□ 1.92
SHF-201ENST00000290894 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
SHF-201ENST00000290894 PZPP20742 1482 aa27.03■■□□□ 1.92
SHF-201ENST00000290894 ANKRD50Q9ULJ7 1429 aa27.03■■□□□ 1.92
SHF-201ENST00000290894 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
SHF-201ENST00000290894 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
SHF-201ENST00000290894 PKD2Q13563 968 aa26.98■■□□□ 1.91
SHF-201ENST00000290894 TTC37Q6PGP7 1564 aa26.97■■□□□ 1.91
SHF-201ENST00000290894 RPRD2Q5VT52 1461 aaKnown RBP26.97■■□□□ 1.91
SHF-201ENST00000290894 SAMD9LQ8IVG5 1584 aa26.96■■□□□ 1.91
SHF-201ENST00000290894 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
SHF-201ENST00000290894 HSPA5P11021 654 aaKnown RBP26.95■■□□□ 1.91
SHF-201ENST00000290894 MBD5Q9P267 1494 aa26.95■■□□□ 1.9
SHF-201ENST00000290894 NBPF8Q3BBV2 869 aa26.94■■□□□ 1.9
SHF-201ENST00000290894 PREX2Q70Z35 1606 aa26.94■■□□□ 1.9
SHF-201ENST00000290894 NUP155O75694 1391 aa26.93■■□□□ 1.9
SHF-201ENST00000290894 KIF15Q9NS87 1388 aa26.93■■□□□ 1.9
SHF-201ENST00000290894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.93■■□□□ 1.9
SHF-201ENST00000290894 ARHGAP5Q13017 1502 aa26.93■■□□□ 1.9
SHF-201ENST00000290894 SHANK2Q9UPX8 1470 aa26.92■■□□□ 1.9
SHF-201ENST00000290894 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
SHF-201ENST00000290894 SYCP2Q9BX26 1530 aa26.89■■□□□ 1.89
SHF-201ENST00000290894 KIAA1107Q9UPP5 1409 aa26.88■■□□□ 1.89
SHF-201ENST00000290894 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
SHF-201ENST00000290894 EIF4G2P78344 907 aaKnown RBP eCLIP26.87■■□□□ 1.89
SHF-201ENST00000290894 ZNF326Q5BKZ1 582 aaKnown RBP26.86■■□□□ 1.89
SHF-201ENST00000290894 ARHGEF5Q12774 1597 aa26.86■■□□□ 1.89
SHF-201ENST00000290894 ZCCHC11Q5TAX3 1644 aaKnown RBP26.85■■□□□ 1.89
SHF-201ENST00000290894 ANP32CO43423 234 aa26.84■■□□□ 1.89
SHF-201ENST00000290894 WASHC2AQ641Q2 1341 aa26.83■■□□□ 1.89
SHF-201ENST00000290894 MYO5CQ9NQX4 1742 aa26.8■■□□□ 1.88
SHF-201ENST00000290894 C11orf95C9JLR9 678 aaPredicted RBP26.77■■□□□ 1.88
SHF-201ENST00000290894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.88
SHF-201ENST00000290894 RSPH4AQ5TD94 716 aa26.76■■□□□ 1.87
SHF-201ENST00000290894 ARHGEF12Q9NZN5 1544 aa26.74■■□□□ 1.87
SHF-201ENST00000290894 UHRF1BP1LA0JNW5 1464 aa26.72■■□□□ 1.87
SHF-201ENST00000290894 PLCH2O75038 1416 aa26.7■■□□□ 1.86
SHF-201ENST00000290894 EFCAB2Q5VUJ9 269 aa26.69■■□□□ 1.86
SHF-201ENST00000290894 KDM2AQ9Y2K7 1162 aa26.69■■□□□ 1.86
SHF-201ENST00000290894 KDM5DQ9BY66 1539 aa26.67■■□□□ 1.86
SHF-201ENST00000290894 FAM135AQ9P2D6 1515 aa26.66■■□□□ 1.86
SHF-201ENST00000290894 PLEKHH2Q8IVE3 1493 aa26.65■■□□□ 1.86
SHF-201ENST00000290894 CCER2I3L3R5 266 aa26.64■■□□□ 1.85
SHF-201ENST00000290894 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
SHF-201ENST00000290894 AFAP1Q8N556 730 aa26.62■■□□□ 1.85
SHF-201ENST00000290894 CCDC7Q96M83 1385 aa26.62■■□□□ 1.85
SHF-201ENST00000290894 SPATA31E1Q6ZUB1 1445 aa26.61■■□□□ 1.85
SHF-201ENST00000290894 DCAF11Q8TEB1 546 aa26.61■■□□□ 1.85
SHF-201ENST00000290894 MAST1Q9Y2H9 1570 aa26.6■■□□□ 1.85
SHF-201ENST00000290894 POLR3GLQ9BT43 218 aa26.59■■□□□ 1.85
SHF-201ENST00000290894 KIF7Q2M1P5 1343 aa26.58■■□□□ 1.85
SHF-201ENST00000290894 RGL3Q3MIN7 710 aa26.58■■□□□ 1.84
SHF-201ENST00000290894 ABCC1P33527 1531 aa26.57■■□□□ 1.84
SHF-201ENST00000290894 USP47Q96K76 1375 aa26.56■■□□□ 1.84
SHF-201ENST00000290894 WDR7Q9Y4E6 1490 aa26.56■■□□□ 1.84
SHF-201ENST00000290894 PLXNC1O60486 1568 aa26.55■■□□□ 1.84
SHF-201ENST00000290894 CNTLNQ9NXG0 1405 aa26.55■■□□□ 1.84
SHF-201ENST00000290894 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
SHF-201ENST00000290894 CNGB1Q14028 1251 aaPredicted RBP26.53■■□□□ 1.84
SHF-201ENST00000290894 SPAG9O60271 1321 aaKnown RBP26.53■■□□□ 1.84
SHF-201ENST00000290894 UNC13BO14795 1591 aa26.51■■□□□ 1.83
SHF-201ENST00000290894 CCDC144AA2RUR9 1427 aa26.51■■□□□ 1.83
SHF-201ENST00000290894 CARD11Q9BXL7 1154 aa26.51■■□□□ 1.83
SHF-201ENST00000290894 DUOX2Q9NRD8 1548 aa26.51■■□□□ 1.83
SHF-201ENST00000290894 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms