RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 MSNP26038 577 aaKnown RBP14.11□□□□□ -0.15
PREX2-201ENST00000288368 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
PREX2-201ENST00000288368 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
PREX2-201ENST00000288368 TMF1P82094 1093 aa14.08□□□□□ -0.16
PREX2-201ENST00000288368 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
PREX2-201ENST00000288368 MORC1Q86VD1 984 aa14.07□□□□□ -0.16
PREX2-201ENST00000288368 MLECQ14165 292 aa14.07□□□□□ -0.16
PREX2-201ENST00000288368 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
PREX2-201ENST00000288368 APBB1O00213 710 aa14.06□□□□□ -0.16
PREX2-201ENST00000288368 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
PREX2-201ENST00000288368 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
PREX2-201ENST00000288368 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
PREX2-201ENST00000288368 EIF3AQ14152 1382 aaKnown RBP14.06□□□□□ -0.16
PREX2-201ENST00000288368 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
PREX2-201ENST00000288368 WIZO95785 1651 aa14.05□□□□□ -0.16
PREX2-201ENST00000288368 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
PREX2-201ENST00000288368 L1TD1Q5T7N2 865 aaKnown RBP14.04□□□□□ -0.16
PREX2-201ENST00000288368 ZNF330Q9Y3S2 320 aaPredicted RBP14.03□□□□□ -0.16
PREX2-201ENST00000288368 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
PREX2-201ENST00000288368 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
PREX2-201ENST00000288368 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.16
PREX2-201ENST00000288368 CUX2O14529 1486 aa14.02□□□□□ -0.17
PREX2-201ENST00000288368 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
PREX2-201ENST00000288368 ITPRIPQ8IWB1 547 aa14□□□□□ -0.17
PREX2-201ENST00000288368 GPATCH3Q96I76 525 aa14□□□□□ -0.17
PREX2-201ENST00000288368 STK26Q9P289 416 aa14□□□□□ -0.17
PREX2-201ENST00000288368 ARID3AQ99856 593 aa13.99□□□□□ -0.17
PREX2-201ENST00000288368 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
PREX2-201ENST00000288368 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
PREX2-201ENST00000288368 PRM3Q9NNZ6 103 aa13.98□□□□□ -0.17
PREX2-201ENST00000288368 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
PREX2-201ENST00000288368 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
PREX2-201ENST00000288368 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
PREX2-201ENST00000288368 HDGFL2Q7Z4V5 671 aaPredicted RBP13.97□□□□□ -0.17
PREX2-201ENST00000288368 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
PREX2-201ENST00000288368 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.18
PREX2-201ENST00000288368 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
PREX2-201ENST00000288368 CSB-PGBD3P0DP91 1061 aa13.95□□□□□ -0.18
PREX2-201ENST00000288368 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
PREX2-201ENST00000288368 PDE4CQ08493 712 aa13.95□□□□□ -0.18
PREX2-201ENST00000288368 PTMSP20962 102 aa13.94□□□□□ -0.18
PREX2-201ENST00000288368 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
PREX2-201ENST00000288368 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
PREX2-201ENST00000288368 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
PREX2-201ENST00000288368 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
PREX2-201ENST00000288368 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
PREX2-201ENST00000288368 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
PREX2-201ENST00000288368 FOXD1Q16676 465 aa13.91□□□□□ -0.18
PREX2-201ENST00000288368 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
PREX2-201ENST00000288368 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
PREX2-201ENST00000288368 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
PREX2-201ENST00000288368 TPM4P67936 248 aa13.9□□□□□ -0.18
PREX2-201ENST00000288368 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
PREX2-201ENST00000288368 SLKQ9H2G2 1235 aaPredicted RBP13.89□□□□□ -0.19
PREX2-201ENST00000288368 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
PREX2-201ENST00000288368 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
PREX2-201ENST00000288368 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
PREX2-201ENST00000288368 VPS53Q5VIR6 699 aa13.88□□□□□ -0.19
PREX2-201ENST00000288368 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
PREX2-201ENST00000288368 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
PREX2-201ENST00000288368 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
PREX2-201ENST00000288368 STK31Q9BXU1 1019 aa13.86□□□□□ -0.19
PREX2-201ENST00000288368 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
PREX2-201ENST00000288368 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
PREX2-201ENST00000288368 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
PREX2-201ENST00000288368 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
PREX2-201ENST00000288368 GOLGA6L1Q8N7Z2 621 aa13.86□□□□□ -0.19
PREX2-201ENST00000288368 PKD2Q13563 968 aa13.85□□□□□ -0.19
PREX2-201ENST00000288368 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
PREX2-201ENST00000288368 G3V3G9 751 aa13.85□□□□□ -0.19
PREX2-201ENST00000288368 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
PREX2-201ENST00000288368 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
PREX2-201ENST00000288368 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
PREX2-201ENST00000288368 GGT6Q6P531 493 aa13.84□□□□□ -0.19
PREX2-201ENST00000288368 FMN1Q68DA7 1419 aa13.84□□□□□ -0.19
PREX2-201ENST00000288368 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
PREX2-201ENST00000288368 SOGA1O94964 1423 aa13.84□□□□□ -0.19
PREX2-201ENST00000288368 CCDC34Q96HJ3 373 aa13.83□□□□□ -0.2
PREX2-201ENST00000288368 ANO8Q9HCE9 1232 aaPredicted RBP13.83□□□□□ -0.2
PREX2-201ENST00000288368 PHF14O94880 888 aa13.82□□□□□ -0.2
PREX2-201ENST00000288368 SMC4Q9NTJ3 1288 aa13.82□□□□□ -0.2
PREX2-201ENST00000288368 NUP155O75694 1391 aa13.82□□□□□ -0.2
PREX2-201ENST00000288368 RALBP1Q15311 655 aa13.82□□□□□ -0.2
PREX2-201ENST00000288368 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
PREX2-201ENST00000288368 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
PREX2-201ENST00000288368 HMMRO75330 724 aa13.81□□□□□ -0.2
PREX2-201ENST00000288368 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
PREX2-201ENST00000288368 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
PREX2-201ENST00000288368 CCER2I3L3R5 266 aa13.79□□□□□ -0.2
PREX2-201ENST00000288368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.79□□□□□ -0.2
PREX2-201ENST00000288368 CCDC146Q8IYE0 955 aa13.79□□□□□ -0.2
PREX2-201ENST00000288368 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
PREX2-201ENST00000288368 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
PREX2-201ENST00000288368 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
PREX2-201ENST00000288368 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
PREX2-201ENST00000288368 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
PREX2-201ENST00000288368 RAB3GAP2Q9H2M9 1393 aa13.78□□□□□ -0.2
PREX2-201ENST00000288368 TOMM22Q9NS69 142 aa13.77□□□□□ -0.2
PREX2-201ENST00000288368 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.2
PREX2-201ENST00000288368 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms