RNA–Protein interactions for RNA: ENST00000287497.12

ITGAM-201, Transcript of integrin subunit alpha M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAM, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-201ENST00000287497 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
ITGAM-201ENST00000287497 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
ITGAM-201ENST00000287497 NUP155O75694 1391 aa16.38■□□□□ 0.21
ITGAM-201ENST00000287497 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
ITGAM-201ENST00000287497 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
ITGAM-201ENST00000287497 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
ITGAM-201ENST00000287497 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
ITGAM-201ENST00000287497 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
ITGAM-201ENST00000287497 MAGI3Q5TCQ9 1506 aa16.36■□□□□ 0.21
ITGAM-201ENST00000287497 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
ITGAM-201ENST00000287497 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
ITGAM-201ENST00000287497 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
ITGAM-201ENST00000287497 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
ITGAM-201ENST00000287497 HECW1Q76N89 1606 aa16.32■□□□□ 0.2
ITGAM-201ENST00000287497 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
ITGAM-201ENST00000287497 NAIPQ13075 1403 aa16.32■□□□□ 0.2
ITGAM-201ENST00000287497 EHBP1L1Q8N3D4 1523 aa16.31■□□□□ 0.2
ITGAM-201ENST00000287497 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
ITGAM-201ENST00000287497 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
ITGAM-201ENST00000287497 GGT6Q6P531 493 aa16.29■□□□□ 0.2
ITGAM-201ENST00000287497 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGAM-201ENST00000287497 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
ITGAM-201ENST00000287497 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
ITGAM-201ENST00000287497 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
ITGAM-201ENST00000287497 MAPKBP1O60336 1514 aa16.27■□□□□ 0.19
ITGAM-201ENST00000287497 MAP3K1Q13233 1512 aa16.26■□□□□ 0.19
ITGAM-201ENST00000287497 MYT1Q01538 1121 aa16.26■□□□□ 0.19
ITGAM-201ENST00000287497 ATP10BO94823 1461 aa16.26■□□□□ 0.19
ITGAM-201ENST00000287497 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
ITGAM-201ENST00000287497 KIF3BO15066 747 aa16.25■□□□□ 0.19
ITGAM-201ENST00000287497 MLECQ14165 292 aa16.25■□□□□ 0.19
ITGAM-201ENST00000287497 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
ITGAM-201ENST00000287497 PTPN23Q9H3S7 1636 aa16.24■□□□□ 0.19
ITGAM-201ENST00000287497 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
ITGAM-201ENST00000287497 ABCC5O15440 1437 aa16.23■□□□□ 0.19
ITGAM-201ENST00000287497 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
ITGAM-201ENST00000287497 DAPK1P53355 1430 aa16.23■□□□□ 0.19
ITGAM-201ENST00000287497 NUP160Q12769 1436 aa16.23■□□□□ 0.19
ITGAM-201ENST00000287497 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
ITGAM-201ENST00000287497 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
ITGAM-201ENST00000287497 KIF15Q9NS87 1388 aa16.22■□□□□ 0.19
ITGAM-201ENST00000287497 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
ITGAM-201ENST00000287497 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
ITGAM-201ENST00000287497 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
ITGAM-201ENST00000287497 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
ITGAM-201ENST00000287497 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
ITGAM-201ENST00000287497 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
ITGAM-201ENST00000287497 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
ITGAM-201ENST00000287497 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
ITGAM-201ENST00000287497 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
ITGAM-201ENST00000287497 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
ITGAM-201ENST00000287497 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
ITGAM-201ENST00000287497 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
ITGAM-201ENST00000287497 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
ITGAM-201ENST00000287497 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
ITGAM-201ENST00000287497 C9orf84Q5VXU9 1444 aa16.14■□□□□ 0.17
ITGAM-201ENST00000287497 KIF14Q15058 1648 aa16.13■□□□□ 0.17
ITGAM-201ENST00000287497 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
ITGAM-201ENST00000287497 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
ITGAM-201ENST00000287497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGAM-201ENST00000287497 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
ITGAM-201ENST00000287497 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
ITGAM-201ENST00000287497 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
ITGAM-201ENST00000287497 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.17
ITGAM-201ENST00000287497 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
ITGAM-201ENST00000287497 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
ITGAM-201ENST00000287497 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
ITGAM-201ENST00000287497 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
ITGAM-201ENST00000287497 CHD1O14646 1710 aa16.07■□□□□ 0.16
ITGAM-201ENST00000287497 ST20-MTHFSA0A0A6YYL1 179 aa16.06■□□□□ 0.16
ITGAM-201ENST00000287497 KDM6BO15054 1643 aa16.06■□□□□ 0.16
ITGAM-201ENST00000287497 ARID4BQ4LE39 1312 aaPredicted RBP16.06■□□□□ 0.16
ITGAM-201ENST00000287497 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
ITGAM-201ENST00000287497 CCER2I3L3R5 266 aa16.03■□□□□ 0.16
ITGAM-201ENST00000287497 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
ITGAM-201ENST00000287497 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
ITGAM-201ENST00000287497 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
ITGAM-201ENST00000287497 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
ITGAM-201ENST00000287497 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
ITGAM-201ENST00000287497 TMC1Q8TDI8 760 aa16■□□□□ 0.15
ITGAM-201ENST00000287497 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
ITGAM-201ENST00000287497 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
ITGAM-201ENST00000287497 WASHC2CQ9Y4E1 1318 aa15.99■□□□□ 0.15
ITGAM-201ENST00000287497 PLEKHH2Q8IVE3 1493 aa15.98■□□□□ 0.15
ITGAM-201ENST00000287497 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
ITGAM-201ENST00000287497 STK26Q9P289 416 aa15.97■□□□□ 0.15
ITGAM-201ENST00000287497 TRAPPC8Q9Y2L5 1435 aa15.96■□□□□ 0.15
ITGAM-201ENST00000287497 SYCP2Q9BX26 1530 aa15.96■□□□□ 0.15
ITGAM-201ENST00000287497 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
ITGAM-201ENST00000287497 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.14
ITGAM-201ENST00000287497 ROCK1Q13464 1354 aa15.95■□□□□ 0.14
ITGAM-201ENST00000287497 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
ITGAM-201ENST00000287497 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
ITGAM-201ENST00000287497 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
ITGAM-201ENST00000287497 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
ITGAM-201ENST00000287497 USP47Q96K76 1375 aa15.94■□□□□ 0.14
ITGAM-201ENST00000287497 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
ITGAM-201ENST00000287497 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
ITGAM-201ENST00000287497 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
ITGAM-201ENST00000287497 KANK1Q14678 1352 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms