RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 ZEB1P37275 1124 aaPredicted RBP14.42□□□□□ -0.1
PPP4R1-201ENST00000285124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.11e-6■■□□□ 12.6
PPP4R1-201ENST00000285124 KDM5BQ9UGL1 1544 aa14.41□□□□□ -0.1
PPP4R1-201ENST00000285124 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
PPP4R1-201ENST00000285124 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-201ENST00000285124 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
PPP4R1-201ENST00000285124 ABCC5O15440 1437 aa14.39□□□□□ -0.11
PPP4R1-201ENST00000285124 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
PPP4R1-201ENST00000285124 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
PPP4R1-201ENST00000285124 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
PPP4R1-201ENST00000285124 DHX57Q6P158 1386 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-201ENST00000285124 DAPK1P53355 1430 aa14.36□□□□□ -0.11
PPP4R1-201ENST00000285124 WDR7Q9Y4E6 1490 aa14.36□□□□□ -0.11
PPP4R1-201ENST00000285124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
PPP4R1-201ENST00000285124 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-201ENST00000285124 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
PPP4R1-201ENST00000285124 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
PPP4R1-201ENST00000285124 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
PPP4R1-201ENST00000285124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.35□□□□□ -0.111e-18■■■■□ 20.3
PPP4R1-201ENST00000285124 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
PPP4R1-201ENST00000285124 NAIPQ13075 1403 aa14.34□□□□□ -0.11
PPP4R1-201ENST00000285124 TTC37Q6PGP7 1564 aa14.33□□□□□ -0.11
PPP4R1-201ENST00000285124 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-201ENST00000285124 CD109Q6YHK3 1445 aa14.31□□□□□ -0.12
PPP4R1-201ENST00000285124 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
PPP4R1-201ENST00000285124 PLCH2O75038 1416 aa14.31□□□□□ -0.12
PPP4R1-201ENST00000285124 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
PPP4R1-201ENST00000285124 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
PPP4R1-201ENST00000285124 HFM1A2PYH4 1435 aa14.29□□□□□ -0.12
PPP4R1-201ENST00000285124 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
PPP4R1-201ENST00000285124 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
PPP4R1-201ENST00000285124 SCAPERQ9BY12 1400 aa14.28□□□□□ -0.12
PPP4R1-201ENST00000285124 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
PPP4R1-201ENST00000285124 NCOA1Q15788 1441 aa14.27□□□□□ -0.12
PPP4R1-201ENST00000285124 KIF15Q9NS87 1388 aa14.27□□□□□ -0.13
PPP4R1-201ENST00000285124 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.13
PPP4R1-201ENST00000285124 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.13
PPP4R1-201ENST00000285124 FANCAO15360 1455 aa14.27□□□□□ -0.13
PPP4R1-201ENST00000285124 AKNAQ7Z591 1439 aa14.25□□□□□ -0.13
PPP4R1-201ENST00000285124 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
PPP4R1-201ENST00000285124 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
PPP4R1-201ENST00000285124 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
PPP4R1-201ENST00000285124 NUP155O75694 1391 aa14.24□□□□□ -0.13
PPP4R1-201ENST00000285124 PKD2Q13563 968 aa14.24□□□□□ -0.13
PPP4R1-201ENST00000285124 KDM6BO15054 1643 aa14.23□□□□□ -0.13
PPP4R1-201ENST00000285124 SAMD9LQ8IVG5 1584 aa14.23□□□□□ -0.13
PPP4R1-201ENST00000285124 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
PPP4R1-201ENST00000285124 KIF3BO15066 747 aa14.22□□□□□ -0.13
PPP4R1-201ENST00000285124 CDC42BPBQ9Y5S2 1711 aa14.22□□□□□ -0.13
PPP4R1-201ENST00000285124 ITSN2Q9NZM3 1697 aa14.22□□□□□ -0.13
PPP4R1-201ENST00000285124 GGT6Q6P531 493 aa14.21□□□□□ -0.13
PPP4R1-201ENST00000285124 ADGRL1O94910 1474 aa14.21□□□□□ -0.13
PPP4R1-201ENST00000285124 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.13
PPP4R1-201ENST00000285124 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
PPP4R1-201ENST00000285124 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
PPP4R1-201ENST00000285124 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
PPP4R1-201ENST00000285124 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
PPP4R1-201ENST00000285124 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
PPP4R1-201ENST00000285124 MLECQ14165 292 aa14.18□□□□□ -0.14
PPP4R1-201ENST00000285124 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
PPP4R1-201ENST00000285124 MYO5CQ9NQX4 1742 aa14.16□□□□□ -0.14
PPP4R1-201ENST00000285124 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
PPP4R1-201ENST00000285124 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
PPP4R1-201ENST00000285124 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
PPP4R1-201ENST00000285124 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
PPP4R1-201ENST00000285124 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
PPP4R1-201ENST00000285124 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
PPP4R1-201ENST00000285124 SENP3Q9H4L4 574 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-201ENST00000285124 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
PPP4R1-201ENST00000285124 CLSPNQ9HAW4 1339 aa14.12□□□□□ -0.15
PPP4R1-201ENST00000285124 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
PPP4R1-201ENST00000285124 ABCA9Q8IUA7 1624 aa14.1□□□□□ -0.15
PPP4R1-201ENST00000285124 ABCC1P33527 1531 aa14.09□□□□□ -0.15
PPP4R1-201ENST00000285124 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
PPP4R1-201ENST00000285124 ARID4BQ4LE39 1312 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-201ENST00000285124 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
PPP4R1-201ENST00000285124 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-201ENST00000285124 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
PPP4R1-201ENST00000285124 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
PPP4R1-201ENST00000285124 SHANK2Q9UPX8 1470 aa14.05□□□□□ -0.16
PPP4R1-201ENST00000285124 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
PPP4R1-201ENST00000285124 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-201ENST00000285124 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
PPP4R1-201ENST00000285124 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
PPP4R1-201ENST00000285124 PZPP20742 1482 aa14.03□□□□□ -0.16
PPP4R1-201ENST00000285124 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
PPP4R1-201ENST00000285124 DHX29Q7Z478 1369 aaKnown RBP14.02□□□□□ -0.16
PPP4R1-201ENST00000285124 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.16
PPP4R1-201ENST00000285124 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
PPP4R1-201ENST00000285124 POGZQ7Z3K3 1410 aa14.02□□□□□ -0.17
PPP4R1-201ENST00000285124 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
PPP4R1-201ENST00000285124 DIP2BQ9P265 1576 aa14□□□□□ -0.17
PPP4R1-201ENST00000285124 ATP7AQ04656 1500 aa14□□□□□ -0.17
PPP4R1-201ENST00000285124 COL17A1Q9UMD9 1497 aaPredicted RBP14□□□□□ -0.17
PPP4R1-201ENST00000285124 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
PPP4R1-201ENST00000285124 NEO1Q92859 1461 aa13.98□□□□□ -0.17
PPP4R1-201ENST00000285124 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
PPP4R1-201ENST00000285124 KANK1Q14678 1352 aa13.98□□□□□ -0.17
PPP4R1-201ENST00000285124 ARAP3Q8WWN8 1544 aa13.98□□□□□ -0.17
PPP4R1-201ENST00000285124 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms