RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
SKA1-201ENST00000285116 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
SKA1-201ENST00000285116 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
SKA1-201ENST00000285116 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
SKA1-201ENST00000285116 MSH5O43196 834 aa14.42□□□□□ -0.1
SKA1-201ENST00000285116 DAPK1P53355 1430 aa14.41□□□□□ -0.1
SKA1-201ENST00000285116 ITSN2Q9NZM3 1697 aa14.41□□□□□ -0.1
SKA1-201ENST00000285116 RAPGEF6Q8TEU7 1601 aa14.41□□□□□ -0.1
SKA1-201ENST00000285116 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
SKA1-201ENST00000285116 KIAA0586Q9BVV6 1533 aa14.41□□□□□ -0.1
SKA1-201ENST00000285116 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
SKA1-201ENST00000285116 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
SKA1-201ENST00000285116 DISP1Q96F81 1524 aa14.39□□□□□ -0.11
SKA1-201ENST00000285116 WASHC2AQ641Q2 1341 aa14.39□□□□□ -0.11
SKA1-201ENST00000285116 ANKRD30BQ9BXX2 1392 aa14.39□□□□□ -0.11
SKA1-201ENST00000285116 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
SKA1-201ENST00000285116 SPATA31E1Q6ZUB1 1445 aa14.37□□□□□ -0.11
SKA1-201ENST00000285116 ABCC5O15440 1437 aa14.37□□□□□ -0.11
SKA1-201ENST00000285116 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
SKA1-201ENST00000285116 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
SKA1-201ENST00000285116 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
SKA1-201ENST00000285116 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
SKA1-201ENST00000285116 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
SKA1-201ENST00000285116 ADGRL2O95490 1459 aa14.36□□□□□ -0.11
SKA1-201ENST00000285116 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
SKA1-201ENST00000285116 MBD5Q9P267 1494 aa14.36□□□□□ -0.11
SKA1-201ENST00000285116 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
SKA1-201ENST00000285116 CCDC7Q96M83 1385 aa14.34□□□□□ -0.11
SKA1-201ENST00000285116 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.12
SKA1-201ENST00000285116 CDK11AQ9UQ88 783 aaPredicted RBP14.33□□□□□ -0.12
SKA1-201ENST00000285116 KIF14Q15058 1648 aa14.31□□□□□ -0.12
SKA1-201ENST00000285116 PZPP20742 1482 aa14.31□□□□□ -0.12
SKA1-201ENST00000285116 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
SKA1-201ENST00000285116 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
SKA1-201ENST00000285116 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
SKA1-201ENST00000285116 L3MBTL2Q969R5 705 aa14.29□□□□□ -0.12
SKA1-201ENST00000285116 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
SKA1-201ENST00000285116 CAMSAP2Q08AD1 1489 aa14.28□□□□□ -0.12
SKA1-201ENST00000285116 KDM5DQ9BY66 1539 aa14.27□□□□□ -0.12
SKA1-201ENST00000285116 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.13
SKA1-201ENST00000285116 SHANK2Q9UPX8 1470 aa14.27□□□□□ -0.13
SKA1-201ENST00000285116 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
SKA1-201ENST00000285116 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
SKA1-201ENST00000285116 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
SKA1-201ENST00000285116 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
SKA1-201ENST00000285116 ZBED9Q6R2W3 1325 aa14.25□□□□□ -0.13
SKA1-201ENST00000285116 KDM5CP41229 1560 aa14.25□□□□□ -0.13
SKA1-201ENST00000285116 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
SKA1-201ENST00000285116 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
SKA1-201ENST00000285116 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
SKA1-201ENST00000285116 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
SKA1-201ENST00000285116 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
SKA1-201ENST00000285116 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
SKA1-201ENST00000285116 NBPF8Q3BBV2 869 aa14.22□□□□□ -0.13
SKA1-201ENST00000285116 BCORL1Q5H9F3 1711 aa14.21□□□□□ -0.13
SKA1-201ENST00000285116 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
SKA1-201ENST00000285116 KIF7Q2M1P5 1343 aa14.21□□□□□ -0.14
SKA1-201ENST00000285116 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
SKA1-201ENST00000285116 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
SKA1-201ENST00000285116 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
SKA1-201ENST00000285116 DHX29Q7Z478 1369 aaKnown RBP14.19□□□□□ -0.14
SKA1-201ENST00000285116 ABCA8O94911 1581 aa14.19□□□□□ -0.14
SKA1-201ENST00000285116 ARHGEF5Q12774 1597 aa14.19□□□□□ -0.14
SKA1-201ENST00000285116 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
SKA1-201ENST00000285116 NUP160Q12769 1436 aa14.18□□□□□ -0.14
SKA1-201ENST00000285116 E9PCH4 1651 aa14.18□□□□□ -0.14
SKA1-201ENST00000285116 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
SKA1-201ENST00000285116 ABCC10Q5T3U5 1492 aa14.17□□□□□ -0.14
SKA1-201ENST00000285116 DEKP35659 375 aaKnown RBP14.17□□□□□ -0.14
SKA1-201ENST00000285116 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
SKA1-201ENST00000285116 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
SKA1-201ENST00000285116 ANKRD30AQ9BXX3 1397 aa14.16□□□□□ -0.14
SKA1-201ENST00000285116 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
SKA1-201ENST00000285116 PTPRGP23470 1445 aa14.15□□□□□ -0.14
SKA1-201ENST00000285116 IRX6P78412 446 aaPredicted RBP14.15□□□□□ -0.14
SKA1-201ENST00000285116 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
SKA1-201ENST00000285116 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
SKA1-201ENST00000285116 CARMIL2Q6F5E8 1435 aa14.14□□□□□ -0.15
SKA1-201ENST00000285116 ZNF777Q9ULD5 760 aaPredicted RBP14.14□□□□□ -0.15
SKA1-201ENST00000285116 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
SKA1-201ENST00000285116 FOXD1Q16676 465 aa14.13□□□□□ -0.15
SKA1-201ENST00000285116 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
SKA1-201ENST00000285116 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
SKA1-201ENST00000285116 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
SKA1-201ENST00000285116 USP47Q96K76 1375 aa14.12□□□□□ -0.15
SKA1-201ENST00000285116 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
SKA1-201ENST00000285116 LAMC1P11047 1609 aa14.11□□□□□ -0.15
SKA1-201ENST00000285116 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
SKA1-201ENST00000285116 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
SKA1-201ENST00000285116 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
SKA1-201ENST00000285116 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
SKA1-201ENST00000285116 C9orf84Q5VXU9 1444 aa14.08□□□□□ -0.15
SKA1-201ENST00000285116 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
SKA1-201ENST00000285116 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
SKA1-201ENST00000285116 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
SKA1-201ENST00000285116 UNC13BO14795 1591 aa14.07□□□□□ -0.16
SKA1-201ENST00000285116 TRPM1Q7Z4N2 1603 aa14.06□□□□□ -0.16
SKA1-201ENST00000285116 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
SKA1-201ENST00000285116 ATP10BO94823 1461 aa14.05□□□□□ -0.16
SKA1-201ENST00000285116 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms