RNA–Protein interactions for RNA: ENST00000283233.9

CCDC148-201, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 3,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-201ENST00000283233 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
CCDC148-201ENST00000283233 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
CCDC148-201ENST00000283233 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC148-201ENST00000283233 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
CCDC148-201ENST00000283233 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
CCDC148-201ENST00000283233 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
CCDC148-201ENST00000283233 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
CCDC148-201ENST00000283233 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
CCDC148-201ENST00000283233 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
CCDC148-201ENST00000283233 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
CCDC148-201ENST00000283233 PDE4CQ08493 712 aa16.55■□□□□ 0.24
CCDC148-201ENST00000283233 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
CCDC148-201ENST00000283233 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
CCDC148-201ENST00000283233 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
CCDC148-201ENST00000283233 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.23
CCDC148-201ENST00000283233 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC148-201ENST00000283233 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
CCDC148-201ENST00000283233 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
CCDC148-201ENST00000283233 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 FGD1P98174 961 aa16.5■□□□□ 0.23
CCDC148-201ENST00000283233 AAMPQ13685 434 aa16.49■□□□□ 0.23
CCDC148-201ENST00000283233 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
CCDC148-201ENST00000283233 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
CCDC148-201ENST00000283233 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
CCDC148-201ENST00000283233 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
CCDC148-201ENST00000283233 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
CCDC148-201ENST00000283233 GSE1Q14687 1217 aa16.45■□□□□ 0.22
CCDC148-201ENST00000283233 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
CCDC148-201ENST00000283233 HSP90AA2PQ14568 343 aaPredicted RBP16.44■□□□□ 0.22
CCDC148-201ENST00000283233 SIN3AQ96ST3 1273 aa16.44■□□□□ 0.22
CCDC148-201ENST00000283233 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
CCDC148-201ENST00000283233 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
CCDC148-201ENST00000283233 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
CCDC148-201ENST00000283233 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
CCDC148-201ENST00000283233 EPRSP07814 1512 aaKnown RBP16.41■□□□□ 0.22
CCDC148-201ENST00000283233 ANP32CO43423 234 aa16.41■□□□□ 0.22
CCDC148-201ENST00000283233 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CCDC148-201ENST00000283233 RAPGEF6Q8TEU7 1601 aa16.4■□□□□ 0.22
CCDC148-201ENST00000283233 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
CCDC148-201ENST00000283233 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
CCDC148-201ENST00000283233 FAM43AQ8N2R8 423 aa16.38■□□□□ 0.21
CCDC148-201ENST00000283233 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
CCDC148-201ENST00000283233 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
CCDC148-201ENST00000283233 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
CCDC148-201ENST00000283233 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
CCDC148-201ENST00000283233 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
CCDC148-201ENST00000283233 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
CCDC148-201ENST00000283233 ABCA8O94911 1581 aa16.34■□□□□ 0.21
CCDC148-201ENST00000283233 HECW1Q76N89 1606 aa16.34■□□□□ 0.21
CCDC148-201ENST00000283233 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.21
CCDC148-201ENST00000283233 CCER2I3L3R5 266 aa16.33■□□□□ 0.2
CCDC148-201ENST00000283233 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
CCDC148-201ENST00000283233 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
CCDC148-201ENST00000283233 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
CCDC148-201ENST00000283233 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
CCDC148-201ENST00000283233 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
CCDC148-201ENST00000283233 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
CCDC148-201ENST00000283233 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
CCDC148-201ENST00000283233 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
CCDC148-201ENST00000283233 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
CCDC148-201ENST00000283233 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
CCDC148-201ENST00000283233 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
CCDC148-201ENST00000283233 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
CCDC148-201ENST00000283233 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CCDC148-201ENST00000283233 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
CCDC148-201ENST00000283233 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
CCDC148-201ENST00000283233 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
CCDC148-201ENST00000283233 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
CCDC148-201ENST00000283233 RGS3P49796 1198 aa16.25■□□□□ 0.19
CCDC148-201ENST00000283233 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
CCDC148-201ENST00000283233 TROQ12816 1431 aaPredicted RBP16.24■□□□□ 0.19
CCDC148-201ENST00000283233 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
CCDC148-201ENST00000283233 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
CCDC148-201ENST00000283233 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
CCDC148-201ENST00000283233 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC148-201ENST00000283233 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.18
CCDC148-201ENST00000283233 ARXQ96QS3 562 aa16.2■□□□□ 0.18
CCDC148-201ENST00000283233 KIF14Q15058 1648 aa16.2■□□□□ 0.18
CCDC148-201ENST00000283233 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
CCDC148-201ENST00000283233 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
CCDC148-201ENST00000283233 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.17
CCDC148-201ENST00000283233 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
CCDC148-201ENST00000283233 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
CCDC148-201ENST00000283233 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
CCDC148-201ENST00000283233 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
CCDC148-201ENST00000283233 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
CCDC148-201ENST00000283233 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
CCDC148-201ENST00000283233 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
CCDC148-201ENST00000283233 TSPOAP1O95153 1857 aa16.12■□□□□ 0.17
CCDC148-201ENST00000283233 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
CCDC148-201ENST00000283233 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
CCDC148-201ENST00000283233 PRDM4Q9UKN5 801 aa16.11■□□□□ 0.17
CCDC148-201ENST00000283233 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
CCDC148-201ENST00000283233 MYOM3Q5VTT5 1437 aa16.1■□□□□ 0.17
CCDC148-201ENST00000283233 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
CCDC148-201ENST00000283233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms