RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 UACAQ9BZF9 1416 aa25.87■■□□□ 1.73
CAPN1-201ENST00000279247 DAPK1P53355 1430 aa25.83■■□□□ 1.72
CAPN1-201ENST00000279247 KDM6BO15054 1643 aa25.82■■□□□ 1.72
CAPN1-201ENST00000279247 TONSLQ96HA7 1378 aa25.81■■□□□ 1.72
CAPN1-201ENST00000279247 ABCC5O15440 1437 aa25.81■■□□□ 1.72
CAPN1-201ENST00000279247 GPATCH8Q9UKJ3 1502 aaKnown RBP25.79■■□□□ 1.72
CAPN1-201ENST00000279247 CAMSAP2Q08AD1 1489 aa25.76■■□□□ 1.71
CAPN1-201ENST00000279247 MPHOSPH9Q99550 1183 aa25.75■■□□□ 1.71
CAPN1-201ENST00000279247 PPP1R15AO75807 674 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-201ENST00000279247 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.71
CAPN1-201ENST00000279247 SLC4A1APQ9BWU0 796 aaKnown RBP25.69■■□□□ 1.7
CAPN1-201ENST00000279247 DNMT1P26358 1616 aaKnown RBP25.68■■□□□ 1.7
CAPN1-201ENST00000279247 ABCC2Q92887 1545 aa25.68■■□□□ 1.7
CAPN1-201ENST00000279247 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
CAPN1-201ENST00000279247 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.7
CAPN1-201ENST00000279247 CYB5RLQ6IPT4 315 aa25.64■■□□□ 1.69
CAPN1-201ENST00000279247 AKNAQ7Z591 1439 aa25.63■■□□□ 1.69
CAPN1-201ENST00000279247 DDX10Q13206 875 aaKnown RBP25.63■■□□□ 1.69
CAPN1-201ENST00000279247 TIMELESSQ9UNS1 1208 aa25.63■■□□□ 1.69
CAPN1-201ENST00000279247 TSPY4P0CV99 314 aa25.62■■□□□ 1.69
CAPN1-201ENST00000279247 TSPY10P0CW01 314 aa25.62■■□□□ 1.69
CAPN1-201ENST00000279247 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-201ENST00000279247 ROCK1Q13464 1354 aa25.61■■□□□ 1.69
CAPN1-201ENST00000279247 CENPBP07199 599 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-201ENST00000279247 ADCY10Q96PN6 1610 aa25.6■■□□□ 1.69
CAPN1-201ENST00000279247 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
CAPN1-201ENST00000279247 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
CAPN1-201ENST00000279247 ACIN1Q9UKV3 1341 aaKnown RBP25.58■■□□□ 1.69
CAPN1-201ENST00000279247 NCOA1Q15788 1441 aa25.58■■□□□ 1.69
CAPN1-201ENST00000279247 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.68
CAPN1-201ENST00000279247 ANKRD30AQ9BXX3 1397 aa25.56■■□□□ 1.68
CAPN1-201ENST00000279247 ZCCHC11Q5TAX3 1644 aaKnown RBP25.55■■□□□ 1.68
CAPN1-201ENST00000279247 L3MBTL2Q969R5 705 aa25.52■■□□□ 1.68
CAPN1-201ENST00000279247 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
CAPN1-201ENST00000279247 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
CAPN1-201ENST00000279247 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
CAPN1-201ENST00000279247 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
CAPN1-201ENST00000279247 PKD2Q13563 968 aa25.48■■□□□ 1.67
CAPN1-201ENST00000279247 ANKRD50Q9ULJ7 1429 aa25.48■■□□□ 1.67
CAPN1-201ENST00000279247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.672e-8■■■■□ 22.3
CAPN1-201ENST00000279247 UHRF1BP1LA0JNW5 1464 aa25.47■■□□□ 1.67
CAPN1-201ENST00000279247 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
CAPN1-201ENST00000279247 ZNF326Q5BKZ1 582 aaKnown RBP25.46■■□□□ 1.67
CAPN1-201ENST00000279247 NUP155O75694 1391 aa25.44■■□□□ 1.66
CAPN1-201ENST00000279247 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
CAPN1-201ENST00000279247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.664e-6■■□□□ 13.3
CAPN1-201ENST00000279247 ANKRD30BQ9BXX2 1392 aa25.43■■□□□ 1.66
CAPN1-201ENST00000279247 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
CAPN1-201ENST00000279247 ADGBQ8N7X0 1667 aa25.41■■□□□ 1.66
CAPN1-201ENST00000279247 ASXL2Q76L83 1435 aa25.4■■□□□ 1.66
CAPN1-201ENST00000279247 CROCC2H7BZ55 1655 aa25.4■■□□□ 1.66
CAPN1-201ENST00000279247 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
CAPN1-201ENST00000279247 PZPP20742 1482 aa25.39■■□□□ 1.66
CAPN1-201ENST00000279247 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
CAPN1-201ENST00000279247 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
CAPN1-201ENST00000279247 MBD5Q9P267 1494 aa25.37■■□□□ 1.65
CAPN1-201ENST00000279247 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
CAPN1-201ENST00000279247 PREX2Q70Z35 1606 aa25.35■■□□□ 1.65
CAPN1-201ENST00000279247 WDR7Q9Y4E6 1490 aa25.35■■□□□ 1.65
CAPN1-201ENST00000279247 HSPA5P11021 654 aaKnown RBP25.34■■□□□ 1.65
CAPN1-201ENST00000279247 NBPF8Q3BBV2 869 aa25.34■■□□□ 1.65
CAPN1-201ENST00000279247 CCDC141Q6ZP82 1450 aa25.34■■□□□ 1.65
CAPN1-201ENST00000279247 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
CAPN1-201ENST00000279247 EFCAB2Q5VUJ9 269 aa25.31■■□□□ 1.64
CAPN1-201ENST00000279247 AFAP1Q8N556 730 aa25.31■■□□□ 1.64
CAPN1-201ENST00000279247 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
CAPN1-201ENST00000279247 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
CAPN1-201ENST00000279247 KIAA1107Q9UPP5 1409 aa25.28■■□□□ 1.64
CAPN1-201ENST00000279247 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
CAPN1-201ENST00000279247 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
CAPN1-201ENST00000279247 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
CAPN1-201ENST00000279247 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
CAPN1-201ENST00000279247 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
CAPN1-201ENST00000279247 PLCH2O75038 1416 aa25.27■■□□□ 1.64
CAPN1-201ENST00000279247 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
CAPN1-201ENST00000279247 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
CAPN1-201ENST00000279247 MYO5CQ9NQX4 1742 aa25.26■■□□□ 1.63
CAPN1-201ENST00000279247 ARHGEF5Q12774 1597 aa25.24■■□□□ 1.63
CAPN1-201ENST00000279247 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
CAPN1-201ENST00000279247 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
CAPN1-201ENST00000279247 ANP32CO43423 234 aa25.2■■□□□ 1.62
CAPN1-201ENST00000279247 TEX14Q8IWB6 1497 aa25.2■■□□□ 1.62
CAPN1-201ENST00000279247 RGL3Q3MIN7 710 aa25.18■■□□□ 1.62
CAPN1-201ENST00000279247 CNGB1Q14028 1251 aaPredicted RBP25.17■■□□□ 1.62
CAPN1-201ENST00000279247 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
CAPN1-201ENST00000279247 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
CAPN1-201ENST00000279247 FANCAO15360 1455 aa25.15■■□□□ 1.62
CAPN1-201ENST00000279247 C11orf95C9JLR9 678 aaPredicted RBP25.15■■□□□ 1.62
CAPN1-201ENST00000279247 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
CAPN1-201ENST00000279247 DCAF11Q8TEB1 546 aa25.14■■□□□ 1.62
CAPN1-201ENST00000279247 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
CAPN1-201ENST00000279247 FAM69CQ0P6D2 419 aa25.1■■□□□ 1.61
CAPN1-201ENST00000279247 SCAPERQ9BY12 1400 aa25.1■■□□□ 1.61
CAPN1-201ENST00000279247 FAM135AQ9P2D6 1515 aa25.09■■□□□ 1.61
CAPN1-201ENST00000279247 RAPGEF3O95398 923 aa25.07■■□□□ 1.6
CAPN1-201ENST00000279247 ABCA9Q8IUA7 1624 aa25.06■■□□□ 1.6
CAPN1-201ENST00000279247 ADGRL1O94910 1474 aa25.05■■□□□ 1.6
CAPN1-201ENST00000279247 ABCC1P33527 1531 aa25.05■■□□□ 1.6
CAPN1-201ENST00000279247 CARD11Q9BXL7 1154 aa25.01■■□□□ 1.59
CAPN1-201ENST00000279247 CCDC144AA2RUR9 1427 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms