RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 KCNG1Q9UIX4 513 aa13.92□□□□□ -0.18
ERGIC3-201ENST00000279052 L1TD1Q5T7N2 865 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-201ENST00000279052 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
ERGIC3-201ENST00000279052 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-201ENST00000279052 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
ERGIC3-201ENST00000279052 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-201ENST00000279052 DMTNQ08495 405 aa13.89□□□□□ -0.19
ERGIC3-201ENST00000279052 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
ERGIC3-201ENST00000279052 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
ERGIC3-201ENST00000279052 CLGNO14967 610 aa13.86□□□□□ -0.19
ERGIC3-201ENST00000279052 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
ERGIC3-201ENST00000279052 CLIP1P30622 1438 aa13.86□□□□□ -0.19
ERGIC3-201ENST00000279052 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
ERGIC3-201ENST00000279052 KIF20AO95235 890 aa13.84□□□□□ -0.19
ERGIC3-201ENST00000279052 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.19
ERGIC3-201ENST00000279052 KIF21BO75037 1637 aa13.83□□□□□ -0.2
ERGIC3-201ENST00000279052 MMP14P50281 582 aa13.82□□□□□ -0.2
ERGIC3-201ENST00000279052 TAF3Q5VWG9 929 aa13.82□□□□□ -0.2
ERGIC3-201ENST00000279052 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-201ENST00000279052 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
ERGIC3-201ENST00000279052 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-201ENST00000279052 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-201ENST00000279052 FAM193AP78312 1265 aa13.8□□□□□ -0.2
ERGIC3-201ENST00000279052 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
ERGIC3-201ENST00000279052 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
ERGIC3-201ENST00000279052 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-201ENST00000279052 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-201ENST00000279052 TICAM2Q86XR7 235 aa13.79□□□□□ -0.2
ERGIC3-201ENST00000279052 HDAC5Q9UQL6 1122 aa13.79□□□□□ -0.2
ERGIC3-201ENST00000279052 GRIPAP1Q4V328 841 aa13.77□□□□□ -0.2
ERGIC3-201ENST00000279052 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-201ENST00000279052 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
ERGIC3-201ENST00000279052 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERGIC3-201ENST00000279052 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-201ENST00000279052 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-201ENST00000279052 PATL2C9JE40 543 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-201ENST00000279052 PTMSP20962 102 aa13.74□□□□□ -0.21
ERGIC3-201ENST00000279052 GTPBP4Q9BZE4 634 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-201ENST00000279052 APPP05067 770 aa13.74□□□□□ -0.21
ERGIC3-201ENST00000279052 ANP32CO43423 234 aa13.73□□□□□ -0.21
ERGIC3-201ENST00000279052 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
ERGIC3-201ENST00000279052 TERF1P54274 439 aa13.72□□□□□ -0.21
ERGIC3-201ENST00000279052 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-201ENST00000279052 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-201ENST00000279052 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
ERGIC3-201ENST00000279052 FRAT2O75474 233 aaPredicted RBP13.71□□□□□ -0.22
ERGIC3-201ENST00000279052 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.22
ERGIC3-201ENST00000279052 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.22
ERGIC3-201ENST00000279052 ESPNB1AK53 854 aa13.7□□□□□ -0.22
ERGIC3-201ENST00000279052 TMED8Q6PL24 325 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-201ENST00000279052 PSEN1P49768 467 aa13.69□□□□□ -0.22
ERGIC3-201ENST00000279052 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 SLC20A2Q08357 652 aa13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 E9PSI1 815 aa13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
ERGIC3-201ENST00000279052 RIPK4P57078 832 aa13.67□□□□□ -0.22
ERGIC3-201ENST00000279052 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
ERGIC3-201ENST00000279052 MCCP23508 829 aa13.67□□□□□ -0.22
ERGIC3-201ENST00000279052 PDE4AP27815 886 aa13.66□□□□□ -0.22
ERGIC3-201ENST00000279052 CLSTN1O94985 981 aa13.65□□□□□ -0.22
ERGIC3-201ENST00000279052 PLCD4Q9BRC7 762 aa13.65□□□□□ -0.22
ERGIC3-201ENST00000279052 GOLGA6L3A6NEY3 463 aa13.64□□□□□ -0.23
ERGIC3-201ENST00000279052 BACH2Q9BYV9 841 aa13.64□□□□□ -0.23
ERGIC3-201ENST00000279052 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
ERGIC3-201ENST00000279052 ARID3AQ99856 593 aa13.64□□□□□ -0.23
ERGIC3-201ENST00000279052 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
ERGIC3-201ENST00000279052 PHF14O94880 888 aa13.63□□□□□ -0.23
ERGIC3-201ENST00000279052 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
ERGIC3-201ENST00000279052 PPP1R15AO75807 674 aaPredicted RBP13.63□□□□□ -0.23
ERGIC3-201ENST00000279052 HMGB1P09429 215 aaKnown RBP13.63□□□□□ -0.23
ERGIC3-201ENST00000279052 POGKQ9P215 609 aa13.62□□□□□ -0.23
ERGIC3-201ENST00000279052 MS4A1P11836 297 aa13.61□□□□□ -0.23
ERGIC3-201ENST00000279052 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
ERGIC3-201ENST00000279052 ZNF592Q92610 1267 aa13.6□□□□□ -0.23
ERGIC3-201ENST00000279052 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
ERGIC3-201ENST00000279052 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 PRXQ9BXM0 1461 aa13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 SOX12O15370 315 aa13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 YY1AP1Q9H869 796 aa13.59□□□□□ -0.23
ERGIC3-201ENST00000279052 ZBTB22O15209 634 aa13.58□□□□□ -0.24
ERGIC3-201ENST00000279052 IGSF3O75054 1194 aa13.58□□□□□ -0.24
ERGIC3-201ENST00000279052 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
ERGIC3-201ENST00000279052 RALBP1Q15311 655 aa13.57□□□□□ -0.24
ERGIC3-201ENST00000279052 AEBP1Q8IUX7 1158 aa13.57□□□□□ -0.24
ERGIC3-201ENST00000279052 NGEFQ8N5V2 710 aa13.57□□□□□ -0.24
ERGIC3-201ENST00000279052 ERBB4Q15303 1308 aa13.57□□□□□ -0.24
ERGIC3-201ENST00000279052 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
ERGIC3-201ENST00000279052 OFD1O75665 1012 aa13.56□□□□□ -0.24
ERGIC3-201ENST00000279052 GEMIN8Q9NWZ8 242 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-201ENST00000279052 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
ERGIC3-201ENST00000279052 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
ERGIC3-201ENST00000279052 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-201ENST00000279052 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms