RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
ATM-201ENST00000278616 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
ATM-201ENST00000278616 TPM3P06753 285 aa9.38□□□□□ -0.91
ATM-201ENST00000278616 ZNF771Q7L3S4 317 aaPredicted RBP9.38□□□□□ -0.91
ATM-201ENST00000278616 SOX12O15370 315 aa9.38□□□□□ -0.91
ATM-201ENST00000278616 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
ATM-201ENST00000278616 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
ATM-201ENST00000278616 ANO8Q9HCE9 1232 aaPredicted RBP9.37□□□□□ -0.91
ATM-201ENST00000278616 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
ATM-201ENST00000278616 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
ATM-201ENST00000278616 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
ATM-201ENST00000278616 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
ATM-201ENST00000278616 CLIP1P30622 1438 aa9.36□□□□□ -0.91
ATM-201ENST00000278616 SLKQ9H2G2 1235 aaPredicted RBP9.36□□□□□ -0.91
ATM-201ENST00000278616 APBB1O00213 710 aa9.36□□□□□ -0.91
ATM-201ENST00000278616 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
ATM-201ENST00000278616 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
ATM-201ENST00000278616 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
ATM-201ENST00000278616 PDE4CQ08493 712 aa9.35□□□□□ -0.91
ATM-201ENST00000278616 TEX35Q5T0J7 233 aa9.34□□□□□ -0.91
ATM-201ENST00000278616 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.91
ATM-201ENST00000278616 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
ATM-201ENST00000278616 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
ATM-201ENST00000278616 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
ATM-201ENST00000278616 IPO8O15397 1037 aaKnown RBP9.33□□□□□ -0.92
ATM-201ENST00000278616 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
ATM-201ENST00000278616 CREBRFQ8IUR6 639 aa9.32□□□□□ -0.92
ATM-201ENST00000278616 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
ATM-201ENST00000278616 RASSF8Q8NHQ8 419 aa9.32□□□□□ -0.92
ATM-201ENST00000278616 IPO9Q96P70 1041 aaKnown RBP9.32□□□□□ -0.92
ATM-201ENST00000278616 TCERG1O14776 1098 aaKnown RBP9.32□□□□□ -0.92
ATM-201ENST00000278616 POGKQ9P215 609 aa9.31□□□□□ -0.92
ATM-201ENST00000278616 CCAR2Q8N163 923 aaKnown RBP9.31□□□□□ -0.92
ATM-201ENST00000278616 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
ATM-201ENST00000278616 GOLGA6L19H0YKK7 550 aa9.3□□□□□ -0.92
ATM-201ENST00000278616 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
ATM-201ENST00000278616 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
ATM-201ENST00000278616 PES1O00541 588 aaKnown RBP9.3□□□□□ -0.92
ATM-201ENST00000278616 APPP05067 770 aa9.3□□□□□ -0.92
ATM-201ENST00000278616 TPM1P09493 284 aa9.3□□□□□ -0.92
ATM-201ENST00000278616 SAFB2Q14151 953 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATM-201ENST00000278616 TPD52L1Q16890 204 aaPredicted RBP9.3□□□□□ -0.92
ATM-201ENST00000278616 PMFBP1Q8TBY8 1022 aa9.29□□□□□ -0.92
ATM-201ENST00000278616 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
ATM-201ENST00000278616 GOLGA3Q08378 1498 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 ST18O60284 1047 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 TPM2P07951 284 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 KIF16BQ96L93 1317 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
ATM-201ENST00000278616 ITPRIPQ8IWB1 547 aa9.27□□□□□ -0.93
ATM-201ENST00000278616 ATP6V1DQ9Y5K8 247 aa9.27□□□□□ -0.93
ATM-201ENST00000278616 MFAP1P55081 439 aaKnown RBP9.27□□□□□ -0.93
ATM-201ENST00000278616 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.93
ATM-201ENST00000278616 KTN1Q86UP2 1357 aaKnown RBP9.26□□□□□ -0.93
ATM-201ENST00000278616 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
ATM-201ENST00000278616 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
ATM-201ENST00000278616 TMF1P82094 1093 aa9.26□□□□□ -0.93
ATM-201ENST00000278616 MAP7D2Q96T17 732 aa9.26□□□□□ -0.93
ATM-201ENST00000278616 HMMRO75330 724 aa9.25□□□□□ -0.93
ATM-201ENST00000278616 RCAN3Q9UKA8 241 aa9.25□□□□□ -0.93
ATM-201ENST00000278616 CEP162Q5TB80 1403 aa9.25□□□□□ -0.93
ATM-201ENST00000278616 GORABQ5T7V8 394 aa9.25□□□□□ -0.93
ATM-201ENST00000278616 NOL8Q76FK4 1167 aaKnown RBP9.25□□□□□ -0.93
ATM-201ENST00000278616 GSE1Q14687 1217 aa9.25□□□□□ -0.93
ATM-201ENST00000278616 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
ATM-201ENST00000278616 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
ATM-201ENST00000278616 RUFY1Q96T51 708 aa9.24□□□□□ -0.93
ATM-201ENST00000278616 IPO7O95373 1038 aaKnown RBP9.24□□□□□ -0.93
ATM-201ENST00000278616 FOXD1Q16676 465 aa9.24□□□□□ -0.93
ATM-201ENST00000278616 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 AK7Q96M32 723 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 BECN2A8MW95 431 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 H3BQV1 296 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 IFFO2Q5TF58 517 aa9.23□□□□□ -0.93
ATM-201ENST00000278616 CWC15Q9P013 229 aaKnown RBP9.23□□□□□ -0.93
ATM-201ENST00000278616 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
ATM-201ENST00000278616 CHMP4AQ9BY43 222 aa9.22□□□□□ -0.93
ATM-201ENST00000278616 TMX4Q9H1E5 349 aaPredicted RBP9.22□□□□□ -0.93
ATM-201ENST00000278616 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
ATM-201ENST00000278616 HDAC5Q9UQL6 1122 aa9.22□□□□□ -0.93
ATM-201ENST00000278616 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
ATM-201ENST00000278616 CHMP7Q8WUX9 453 aaPredicted RBP9.21□□□□□ -0.93
ATM-201ENST00000278616 CDR1P51861 262 aa9.21□□□□□ -0.93
ATM-201ENST00000278616 DDX49Q9Y6V7 483 aaKnown RBP9.21□□□□□ -0.93
ATM-201ENST00000278616 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.93
ATM-201ENST00000278616 FBXO3Q9UK99 471 aa9.21□□□□□ -0.93
ATM-201ENST00000278616 MTERF4Q7Z6M4 381 aaKnown RBP9.21□□□□□ -0.94
ATM-201ENST00000278616 VPS53Q5VIR6 699 aa9.21□□□□□ -0.94
ATM-201ENST00000278616 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.21□□□□□ -0.94
ATM-201ENST00000278616 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.94
ATM-201ENST00000278616 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
ATM-201ENST00000278616 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.94
ATM-201ENST00000278616 HOMER1Q86YM7 354 aa9.21□□□□□ -0.94
ATM-201ENST00000278616 CFDP1Q9UEE9 299 aaPredicted RBP9.2□□□□□ -0.94
ATM-201ENST00000278616 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
ATM-201ENST00000278616 TIMELESSQ9UNS1 1208 aa9.2□□□□□ -0.94
ATM-201ENST00000278616 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
ATM-201ENST00000278616 ANKRD20A12PQ8NF67 263 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms