RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 CERKQ8TCT0 537 aa14.69□□□□□ -0.06
CPNE9-201ENST00000273027 TIMELESSQ9UNS1 1208 aa14.69□□□□□ -0.06
CPNE9-201ENST00000273027 FMN1Q68DA7 1419 aa14.67□□□□□ -0.06
CPNE9-201ENST00000273027 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
CPNE9-201ENST00000273027 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
CPNE9-201ENST00000273027 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
CPNE9-201ENST00000273027 ATP10BO94823 1461 aa14.66□□□□□ -0.06
CPNE9-201ENST00000273027 NEUROD1Q13562 356 aa14.65□□□□□ -0.06
CPNE9-201ENST00000273027 MADDQ8WXG6 1647 aa14.65□□□□□ -0.06
CPNE9-201ENST00000273027 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
CPNE9-201ENST00000273027 BCORL1Q5H9F3 1711 aa14.63□□□□□ -0.07
CPNE9-201ENST00000273027 DISP3Q9P2K9 1392 aa14.63□□□□□ -0.07
CPNE9-201ENST00000273027 SETD5Q9C0A6 1442 aa14.63□□□□□ -0.07
CPNE9-201ENST00000273027 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
CPNE9-201ENST00000273027 SOCS7O14512 581 aa14.61□□□□□ -0.07
CPNE9-201ENST00000273027 RAPGEF6Q8TEU7 1601 aa14.61□□□□□ -0.07
CPNE9-201ENST00000273027 NEO1Q92859 1461 aa14.61□□□□□ -0.07
CPNE9-201ENST00000273027 RIMS1Q86UR5 1692 aaKnown RBP14.59□□□□□ -0.07
CPNE9-201ENST00000273027 MLECQ14165 292 aa14.59□□□□□ -0.07
CPNE9-201ENST00000273027 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
CPNE9-201ENST00000273027 FRMPD1Q5SYB0 1578 aa14.56□□□□□ -0.08
CPNE9-201ENST00000273027 POGZQ7Z3K3 1410 aa14.55□□□□□ -0.08
CPNE9-201ENST00000273027 GTF3C3Q9Y5Q9 886 aa14.54□□□□□ -0.08
CPNE9-201ENST00000273027 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
CPNE9-201ENST00000273027 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
CPNE9-201ENST00000273027 MIER1Q8N108 512 aa14.53□□□□□ -0.08
CPNE9-201ENST00000273027 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
CPNE9-201ENST00000273027 AKNAQ7Z591 1439 aa14.51□□□□□ -0.09
CPNE9-201ENST00000273027 SUPT6HQ7KZ85 1726 aaKnown RBP14.5□□□□□ -0.09
CPNE9-201ENST00000273027 EHBP1L1Q8N3D4 1523 aa14.5□□□□□ -0.09
CPNE9-201ENST00000273027 ARHGEF40Q8TER5 1519 aa14.5□□□□□ -0.09
CPNE9-201ENST00000273027 FANCAO15360 1455 aa14.5□□□□□ -0.09
CPNE9-201ENST00000273027 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
CPNE9-201ENST00000273027 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
CPNE9-201ENST00000273027 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
CPNE9-201ENST00000273027 FHOD3Q2V2M9 1422 aa14.49□□□□□ -0.09
CPNE9-201ENST00000273027 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
CPNE9-201ENST00000273027 YEATS2Q9ULM3 1422 aa14.48□□□□□ -0.09
CPNE9-201ENST00000273027 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
CPNE9-201ENST00000273027 RICTORQ6R327 1708 aa14.46□□□□□ -0.09
CPNE9-201ENST00000273027 ZFYVE16Q7Z3T8 1539 aa14.45□□□□□ -0.1
CPNE9-201ENST00000273027 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
CPNE9-201ENST00000273027 HECW1Q76N89 1606 aa14.44□□□□□ -0.1
CPNE9-201ENST00000273027 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
CPNE9-201ENST00000273027 MYOM3Q5VTT5 1437 aa14.42□□□□□ -0.1
CPNE9-201ENST00000273027 SIGLEC1Q9BZZ2 1709 aa14.42□□□□□ -0.1
CPNE9-201ENST00000273027 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
CPNE9-201ENST00000273027 MAGI2Q86UL8 1455 aa14.41□□□□□ -0.1
CPNE9-201ENST00000273027 FER1L4A9Z1Z3 1794 aa14.41□□□□□ -0.1
CPNE9-201ENST00000273027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPNE9-201ENST00000273027 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
CPNE9-201ENST00000273027 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
CPNE9-201ENST00000273027 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
CPNE9-201ENST00000273027 LRRIQ1Q96JM4 1722 aa14.39□□□□□ -0.11
CPNE9-201ENST00000273027 ATP10AO60312 1499 aa14.38□□□□□ -0.11
CPNE9-201ENST00000273027 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
CPNE9-201ENST00000273027 ITGAEP38570 1179 aa14.38□□□□□ -0.11
CPNE9-201ENST00000273027 MYT1LQ9UL68 1186 aa14.38□□□□□ -0.11
CPNE9-201ENST00000273027 NCOA2Q15596 1464 aa14.38□□□□□ -0.11
CPNE9-201ENST00000273027 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
CPNE9-201ENST00000273027 MIA2Q96PC5 1412 aa14.37□□□□□ -0.11
CPNE9-201ENST00000273027 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
CPNE9-201ENST00000273027 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
CPNE9-201ENST00000273027 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
CPNE9-201ENST00000273027 MYT1Q01538 1121 aa14.36□□□□□ -0.11
CPNE9-201ENST00000273027 STRCQ7RTU9 1775 aa14.36□□□□□ -0.11
CPNE9-201ENST00000273027 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
CPNE9-201ENST00000273027 UHRF1BP1Q6BDS2 1440 aa14.35□□□□□ -0.11
CPNE9-201ENST00000273027 EFCAB2Q5VUJ9 269 aa14.35□□□□□ -0.11
CPNE9-201ENST00000273027 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
CPNE9-201ENST00000273027 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
CPNE9-201ENST00000273027 PLCH2O75038 1416 aa14.33□□□□□ -0.11
CPNE9-201ENST00000273027 C9orf84Q5VXU9 1444 aa14.33□□□□□ -0.11
CPNE9-201ENST00000273027 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
CPNE9-201ENST00000273027 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
CPNE9-201ENST00000273027 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
CPNE9-201ENST00000273027 ESF1Q9H501 851 aaKnown RBP14.33□□□□□ -0.12
CPNE9-201ENST00000273027 AFAP1Q8N556 730 aa14.32□□□□□ -0.12
CPNE9-201ENST00000273027 YTHDC1Q96MU7 727 aaKnown RBP14.32□□□□□ -0.12
CPNE9-201ENST00000273027 PTPRTO14522 1441 aa14.32□□□□□ -0.12
CPNE9-201ENST00000273027 NAIPQ13075 1403 aa14.3□□□□□ -0.12
CPNE9-201ENST00000273027 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
CPNE9-201ENST00000273027 KIF14Q15058 1648 aa14.27□□□□□ -0.12
CPNE9-201ENST00000273027 UBAP1LF5GYI3 381 aa14.27□□□□□ -0.13
CPNE9-201ENST00000273027 CCER2I3L3R5 266 aa14.27□□□□□ -0.13
CPNE9-201ENST00000273027 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
CPNE9-201ENST00000273027 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
CPNE9-201ENST00000273027 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
CPNE9-201ENST00000273027 ROCK1Q13464 1354 aa14.23□□□□□ -0.13
CPNE9-201ENST00000273027 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
CPNE9-201ENST00000273027 ZNF518AQ6AHZ1 1483 aa14.23□□□□□ -0.13
CPNE9-201ENST00000273027 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
CPNE9-201ENST00000273027 KDM5CP41229 1560 aa14.22□□□□□ -0.13
CPNE9-201ENST00000273027 ZNF335Q9H4Z2 1342 aaPredicted RBP14.21□□□□□ -0.13
CPNE9-201ENST00000273027 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
CPNE9-201ENST00000273027 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
CPNE9-201ENST00000273027 TROQ12816 1431 aaPredicted RBP14.21□□□□□ -0.13
CPNE9-201ENST00000273027 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
CPNE9-201ENST00000273027 C3P01024 1663 aa14.2□□□□□ -0.14
CPNE9-201ENST00000273027 PREX2Q70Z35 1606 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms