RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
SMG9-201ENST00000270066 CDK11BP21127 795 aaKnown RBP17.14■□□□□ 0.33
SMG9-201ENST00000270066 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMG9-201ENST00000270066 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
SMG9-201ENST00000270066 STK26Q9P289 416 aa17.12■□□□□ 0.33
SMG9-201ENST00000270066 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
SMG9-201ENST00000270066 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
SMG9-201ENST00000270066 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
SMG9-201ENST00000270066 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
SMG9-201ENST00000270066 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
SMG9-201ENST00000270066 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
SMG9-201ENST00000270066 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
SMG9-201ENST00000270066 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
SMG9-201ENST00000270066 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
SMG9-201ENST00000270066 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
SMG9-201ENST00000270066 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
SMG9-201ENST00000270066 KIF3BO15066 747 aa17.09■□□□□ 0.33
SMG9-201ENST00000270066 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
SMG9-201ENST00000270066 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
SMG9-201ENST00000270066 SOX12O15370 315 aa17.08■□□□□ 0.32
SMG9-201ENST00000270066 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
SMG9-201ENST00000270066 RTF1Q92541 710 aaKnown RBP17.07■□□□□ 0.32
SMG9-201ENST00000270066 FOXD1Q16676 465 aa17.07■□□□□ 0.32
SMG9-201ENST00000270066 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMG9-201ENST00000270066 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
SMG9-201ENST00000270066 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
SMG9-201ENST00000270066 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
SMG9-201ENST00000270066 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
SMG9-201ENST00000270066 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
SMG9-201ENST00000270066 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
SMG9-201ENST00000270066 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
SMG9-201ENST00000270066 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
SMG9-201ENST00000270066 RALBP1Q15311 655 aa17.01■□□□□ 0.31
SMG9-201ENST00000270066 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
SMG9-201ENST00000270066 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
SMG9-201ENST00000270066 RGS3P49796 1198 aa17■□□□□ 0.31
SMG9-201ENST00000270066 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
SMG9-201ENST00000270066 PTPRGP23470 1445 aa16.98■□□□□ 0.31
SMG9-201ENST00000270066 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
SMG9-201ENST00000270066 KCNJ4P48050 445 aa16.96■□□□□ 0.31
SMG9-201ENST00000270066 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
SMG9-201ENST00000270066 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
SMG9-201ENST00000270066 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
SMG9-201ENST00000270066 FGD1P98174 961 aa16.96■□□□□ 0.31
SMG9-201ENST00000270066 CFAP44Q96MT7 982 aa16.96■□□□□ 0.31
SMG9-201ENST00000270066 U2AF1L5P0DN76 240 aaPredicted RBP16.94■□□□□ 0.3
SMG9-201ENST00000270066 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMG9-201ENST00000270066 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
SMG9-201ENST00000270066 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
SMG9-201ENST00000270066 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
SMG9-201ENST00000270066 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
SMG9-201ENST00000270066 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
SMG9-201ENST00000270066 MCCP23508 829 aa16.9■□□□□ 0.3
SMG9-201ENST00000270066 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
SMG9-201ENST00000270066 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.3
SMG9-201ENST00000270066 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
SMG9-201ENST00000270066 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
SMG9-201ENST00000270066 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
SMG9-201ENST00000270066 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
SMG9-201ENST00000270066 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
SMG9-201ENST00000270066 NUTM2DQ5VT03 806 aaPredicted RBP16.84■□□□□ 0.29
SMG9-201ENST00000270066 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
SMG9-201ENST00000270066 STK31Q9BXU1 1019 aa16.83■□□□□ 0.28
SMG9-201ENST00000270066 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
SMG9-201ENST00000270066 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
SMG9-201ENST00000270066 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
SMG9-201ENST00000270066 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
SMG9-201ENST00000270066 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
SMG9-201ENST00000270066 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
SMG9-201ENST00000270066 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
SMG9-201ENST00000270066 RCAN3Q9UKA8 241 aa16.81■□□□□ 0.28
SMG9-201ENST00000270066 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
SMG9-201ENST00000270066 DNTTIP2Q5QJE6 756 aaKnown RBP16.8■□□□□ 0.28
SMG9-201ENST00000270066 AMPHP49418 695 aa16.8■□□□□ 0.28
SMG9-201ENST00000270066 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
SMG9-201ENST00000270066 CCDC9Q9Y3X0 531 aaKnown RBP16.8■□□□□ 0.28
SMG9-201ENST00000270066 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
SMG9-201ENST00000270066 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
SMG9-201ENST00000270066 ITPRIPQ8IWB1 547 aa16.79■□□□□ 0.28
SMG9-201ENST00000270066 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
SMG9-201ENST00000270066 GOLGA6L6A8MZA4 724 aa16.78■□□□□ 0.28
SMG9-201ENST00000270066 IGF1RP08069 1367 aa16.78■□□□□ 0.28
SMG9-201ENST00000270066 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
SMG9-201ENST00000270066 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
SMG9-201ENST00000270066 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
SMG9-201ENST00000270066 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
SMG9-201ENST00000270066 GOLGA6L4A6NEF3 574 aa16.77■□□□□ 0.27
SMG9-201ENST00000270066 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
SMG9-201ENST00000270066 CUX1P39880 1505 aa16.76■□□□□ 0.27
SMG9-201ENST00000270066 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
SMG9-201ENST00000270066 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
SMG9-201ENST00000270066 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
SMG9-201ENST00000270066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMG9-201ENST00000270066 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
SMG9-201ENST00000270066 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
SMG9-201ENST00000270066 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
SMG9-201ENST00000270066 APBB1O00213 710 aa16.73■□□□□ 0.27
SMG9-201ENST00000270066 HMMRO75330 724 aa16.73■□□□□ 0.27
SMG9-201ENST00000270066 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
SMG9-201ENST00000270066 NRDCO43847 1150 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms