RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 GSE1Q14687 1217 aa10.1□□□□□ -0.79
CLTC-201ENST00000269122 GBP4Q96PP9 640 aa10.1□□□□□ -0.79
CLTC-201ENST00000269122 MTUS2Q5JR59 1369 aa10.1□□□□□ -0.79
CLTC-201ENST00000269122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
CLTC-201ENST00000269122 NOC3LQ8WTT2 800 aaKnown RBP10.1□□□□□ -0.79
CLTC-201ENST00000269122 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
CLTC-201ENST00000269122 NPHP1O15259 732 aa10.09□□□□□ -0.79
CLTC-201ENST00000269122 CHMP7Q8WUX9 453 aaPredicted RBP10.08□□□□□ -0.8
CLTC-201ENST00000269122 CEP162Q5TB80 1403 aa10.08□□□□□ -0.8
CLTC-201ENST00000269122 CLIP1P30622 1438 aa10.08□□□□□ -0.8
CLTC-201ENST00000269122 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
CLTC-201ENST00000269122 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
CLTC-201ENST00000269122 USP35Q9P2H5 1018 aa10.07□□□□□ -0.8
CLTC-201ENST00000269122 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
CLTC-201ENST00000269122 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
CLTC-201ENST00000269122 FOXD1Q16676 465 aa10.06□□□□□ -0.8
CLTC-201ENST00000269122 CFAP53Q96M91 514 aa10.06□□□□□ -0.8
CLTC-201ENST00000269122 PLIN1O60240 522 aa10.06□□□□□ -0.8
CLTC-201ENST00000269122 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
CLTC-201ENST00000269122 HSP90B1P14625 803 aaKnown RBP10.06□□□□□ -0.8
CLTC-201ENST00000269122 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
CLTC-201ENST00000269122 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
CLTC-201ENST00000269122 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
CLTC-201ENST00000269122 TSPY4P0CV99 314 aa10.04□□□□□ -0.8
CLTC-201ENST00000269122 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
CLTC-201ENST00000269122 GNL2Q13823 731 aaKnown RBP10.04□□□□□ -0.8
CLTC-201ENST00000269122 MLECQ14165 292 aa10.04□□□□□ -0.8
CLTC-201ENST00000269122 ITPRIPQ8IWB1 547 aa10.04□□□□□ -0.8
CLTC-201ENST00000269122 TCERG1O14776 1098 aaKnown RBP10.03□□□□□ -0.8
CLTC-201ENST00000269122 CLUAP1Q96AJ1 413 aa10.03□□□□□ -0.8
CLTC-201ENST00000269122 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
CLTC-201ENST00000269122 GOLGA6L1Q8N7Z2 621 aa10.03□□□□□ -0.8
CLTC-201ENST00000269122 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.81
CLTC-201ENST00000269122 HSPA5P11021 654 aaKnown RBP10.02□□□□□ -0.81
CLTC-201ENST00000269122 MCCP23508 829 aa10.02□□□□□ -0.81
CLTC-201ENST00000269122 SAFB2Q14151 953 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLTC-201ENST00000269122 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
CLTC-201ENST00000269122 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
CLTC-201ENST00000269122 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
CLTC-201ENST00000269122 TAF7LQ5H9L4 462 aa10□□□□□ -0.81
CLTC-201ENST00000269122 ISY1Q9ULR0 285 aaKnown RBP9.99□□□□□ -0.81
CLTC-201ENST00000269122 PDE4AP27815 886 aa9.99□□□□□ -0.81
CLTC-201ENST00000269122 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
CLTC-201ENST00000269122 DCAF11Q8TEB1 546 aa9.98□□□□□ -0.81
CLTC-201ENST00000269122 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
CLTC-201ENST00000269122 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
CLTC-201ENST00000269122 DDX49Q9Y6V7 483 aaKnown RBP9.97□□□□□ -0.81
CLTC-201ENST00000269122 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
CLTC-201ENST00000269122 SYAP1Q96A49 352 aaPredicted RBP9.97□□□□□ -0.81
CLTC-201ENST00000269122 R3HCC1Q9Y3T6 440 aaKnown RBP9.97□□□□□ -0.81
CLTC-201ENST00000269122 SETQ01105 290 aaPredicted RBP9.96□□□□□ -0.82
CLTC-201ENST00000269122 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
CLTC-201ENST00000269122 GOLGA2Q08379 1002 aa9.95□□□□□ -0.82
CLTC-201ENST00000269122 SKIDA1Q1XH10 827 aa9.95□□□□□ -0.82
CLTC-201ENST00000269122 APPP05067 770 aa9.95□□□□□ -0.82
CLTC-201ENST00000269122 EXOC6Q8TAG9 804 aa9.95□□□□□ -0.82
CLTC-201ENST00000269122 BCL2L13Q9BXK5 485 aa9.94□□□□□ -0.82
CLTC-201ENST00000269122 NUDCQ9Y266 331 aa9.94□□□□□ -0.82
CLTC-201ENST00000269122 PES1O00541 588 aaKnown RBP9.94□□□□□ -0.82
CLTC-201ENST00000269122 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
CLTC-201ENST00000269122 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
CLTC-201ENST00000269122 POGKQ9P215 609 aa9.92□□□□□ -0.82
CLTC-201ENST00000269122 ZNF330Q9Y3S2 320 aaPredicted RBP9.92□□□□□ -0.82
CLTC-201ENST00000269122 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
CLTC-201ENST00000269122 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
CLTC-201ENST00000269122 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
CLTC-201ENST00000269122 MPNDQ8N594 471 aa9.91□□□□□ -0.82
CLTC-201ENST00000269122 PAK3O75914 559 aaPredicted RBP9.91□□□□□ -0.82
CLTC-201ENST00000269122 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
CLTC-201ENST00000269122 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
CLTC-201ENST00000269122 PRM3Q9NNZ6 103 aa9.91□□□□□ -0.82
CLTC-201ENST00000269122 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
CLTC-201ENST00000269122 MS4A1P11836 297 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 MORC1Q86VD1 984 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 FANCIQ9NVI1 1328 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 TPM4P67936 248 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 SMC4Q9NTJ3 1288 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 STK26Q9P289 416 aa9.9□□□□□ -0.82
CLTC-201ENST00000269122 GOLGA3Q08378 1498 aa9.9□□□□□ -0.83
CLTC-201ENST00000269122 SLC4A10Q6U841 1118 aa9.89□□□□□ -0.83
CLTC-201ENST00000269122 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
CLTC-201ENST00000269122 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
CLTC-201ENST00000269122 MCTP1Q6DN14 999 aa9.89□□□□□ -0.83
CLTC-201ENST00000269122 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
CLTC-201ENST00000269122 FOSBP53539 338 aa9.88□□□□□ -0.83
CLTC-201ENST00000269122 TMF1P82094 1093 aa9.88□□□□□ -0.83
CLTC-201ENST00000269122 PHF14O94880 888 aa9.88□□□□□ -0.83
CLTC-201ENST00000269122 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
CLTC-201ENST00000269122 PMFBP1Q8TBY8 1022 aa9.88□□□□□ -0.83
CLTC-201ENST00000269122 KTN1Q86UP2 1357 aaKnown RBP9.87□□□□□ -0.83
CLTC-201ENST00000269122 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
CLTC-201ENST00000269122 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
CLTC-201ENST00000269122 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.839e-7■■■■□ 24.1
CLTC-201ENST00000269122 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
CLTC-201ENST00000269122 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
CLTC-201ENST00000269122 CHMP4BQ9H444 224 aaKnown RBP9.86□□□□□ -0.83
CLTC-201ENST00000269122 PLEKHD1A6NEE1 506 aa9.86□□□□□ -0.83
CLTC-201ENST00000269122 GOLGA6L19H0YKK7 550 aa9.86□□□□□ -0.83
CLTC-201ENST00000269122 ANKRD45Q5TZF3 282 aa9.86□□□□□ -0.83
CLTC-201ENST00000269122 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms