RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CCDC7Q96M83 1385 aa23.54■■□□□ 1.36
SPG7-201ENST00000268704 MRS2Q9HD23 443 aa23.53■■□□□ 1.36
SPG7-201ENST00000268704 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
SPG7-201ENST00000268704 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
SPG7-201ENST00000268704 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
SPG7-201ENST00000268704 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
SPG7-201ENST00000268704 WDR62O43379 1518 aa23.48■■□□□ 1.35
SPG7-201ENST00000268704 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
SPG7-201ENST00000268704 IQGAP2Q13576 1575 aa23.47■■□□□ 1.35
SPG7-201ENST00000268704 B4GALNT3Q6L9W6 998 aa23.46■■□□□ 1.35
SPG7-201ENST00000268704 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
SPG7-201ENST00000268704 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.34
SPG7-201ENST00000268704 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
SPG7-201ENST00000268704 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
SPG7-201ENST00000268704 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
SPG7-201ENST00000268704 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
SPG7-201ENST00000268704 FANCIQ9NVI1 1328 aa23.43■■□□□ 1.34
SPG7-201ENST00000268704 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
SPG7-201ENST00000268704 DAPK1P53355 1430 aa23.42■■□□□ 1.34
SPG7-201ENST00000268704 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
SPG7-201ENST00000268704 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SPG7-201ENST00000268704 ZBED9Q6R2W3 1325 aa23.4■■□□□ 1.34
SPG7-201ENST00000268704 ABCC5O15440 1437 aa23.38■■□□□ 1.33
SPG7-201ENST00000268704 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
SPG7-201ENST00000268704 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
SPG7-201ENST00000268704 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
SPG7-201ENST00000268704 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
SPG7-201ENST00000268704 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
SPG7-201ENST00000268704 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
SPG7-201ENST00000268704 ERICH6BQ5W0A0 696 aa23.34■■□□□ 1.33
SPG7-201ENST00000268704 ROCK1Q13464 1354 aa23.31■■□□□ 1.32
SPG7-201ENST00000268704 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
SPG7-201ENST00000268704 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
SPG7-201ENST00000268704 PZPP20742 1482 aa23.26■■□□□ 1.31
SPG7-201ENST00000268704 BCORL1Q5H9F3 1711 aa23.25■■□□□ 1.31
SPG7-201ENST00000268704 PRKCSHP14314 528 aaPredicted RBP23.24■■□□□ 1.31
SPG7-201ENST00000268704 DHX29Q7Z478 1369 aaKnown RBP23.24■■□□□ 1.31
SPG7-201ENST00000268704 ZNF777Q9ULD5 760 aaPredicted RBP23.23■■□□□ 1.31
SPG7-201ENST00000268704 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
SPG7-201ENST00000268704 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
SPG7-201ENST00000268704 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
SPG7-201ENST00000268704 USP47Q96K76 1375 aa23.21■■□□□ 1.31
SPG7-201ENST00000268704 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
SPG7-201ENST00000268704 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
SPG7-201ENST00000268704 CAMSAP2Q08AD1 1489 aa23.19■■□□□ 1.3
SPG7-201ENST00000268704 RAPGEF6Q8TEU7 1601 aa23.18■■□□□ 1.3
SPG7-201ENST00000268704 CFDP1Q9UEE9 299 aaPredicted RBP23.18■■□□□ 1.3
SPG7-201ENST00000268704 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
SPG7-201ENST00000268704 PKD2Q13563 968 aa23.17■■□□□ 1.3
SPG7-201ENST00000268704 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
SPG7-201ENST00000268704 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
SPG7-201ENST00000268704 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
SPG7-201ENST00000268704 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
SPG7-201ENST00000268704 KIF14Q15058 1648 aa23.12■■□□□ 1.29
SPG7-201ENST00000268704 KDM5CP41229 1560 aa23.11■■□□□ 1.29
SPG7-201ENST00000268704 PLB1Q6P1J6 1458 aa23.1■■□□□ 1.29
SPG7-201ENST00000268704 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
SPG7-201ENST00000268704 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
SPG7-201ENST00000268704 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
SPG7-201ENST00000268704 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
SPG7-201ENST00000268704 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
SPG7-201ENST00000268704 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
SPG7-201ENST00000268704 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
SPG7-201ENST00000268704 KDM2AQ9Y2K7 1162 aa23.06■■□□□ 1.28
SPG7-201ENST00000268704 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
SPG7-201ENST00000268704 ITSN2Q9NZM3 1697 aa23.04■■□□□ 1.28
SPG7-201ENST00000268704 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
SPG7-201ENST00000268704 NBR1Q14596 966 aa23.04■■□□□ 1.28
SPG7-201ENST00000268704 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
SPG7-201ENST00000268704 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
SPG7-201ENST00000268704 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
SPG7-201ENST00000268704 ANKRD50Q9ULJ7 1429 aa23.02■■□□□ 1.28
SPG7-201ENST00000268704 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
SPG7-201ENST00000268704 NUP155O75694 1391 aa23■■□□□ 1.27
SPG7-201ENST00000268704 ADGRL2O95490 1459 aa23■■□□□ 1.27
SPG7-201ENST00000268704 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
SPG7-201ENST00000268704 ST20-MTHFSA0A0A6YYL1 179 aa23■■□□□ 1.27
SPG7-201ENST00000268704 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
SPG7-201ENST00000268704 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
SPG7-201ENST00000268704 DEKP35659 375 aaKnown RBP22.97■■□□□ 1.27
SPG7-201ENST00000268704 FBLN2P98095 1184 aa22.96■■□□□ 1.27
SPG7-201ENST00000268704 DCAF11Q8TEB1 546 aa22.95■■□□□ 1.26
SPG7-201ENST00000268704 ARID4BQ4LE39 1312 aaPredicted RBP22.94■■□□□ 1.26
SPG7-201ENST00000268704 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
SPG7-201ENST00000268704 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
SPG7-201ENST00000268704 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
SPG7-201ENST00000268704 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
SPG7-201ENST00000268704 ROCK2O75116 1388 aaKnown RBP22.92■■□□□ 1.26
SPG7-201ENST00000268704 CDC42BPAQ5VT25 1732 aa22.92■■□□□ 1.26
SPG7-201ENST00000268704 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
SPG7-201ENST00000268704 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
SPG7-201ENST00000268704 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
SPG7-201ENST00000268704 LRPPRCP42704 1394 aaKnown RBP22.9■■□□□ 1.26
SPG7-201ENST00000268704 MYBBP1AQ9BQG0 1328 aaKnown RBP22.89■■□□□ 1.26
SPG7-201ENST00000268704 ANP32AP39687 249 aaKnown RBP22.89■■□□□ 1.26
SPG7-201ENST00000268704 EXOC6Q8TAG9 804 aa22.88■■□□□ 1.25
SPG7-201ENST00000268704 IPO9Q96P70 1041 aaKnown RBP22.87■■□□□ 1.25
SPG7-201ENST00000268704 HNRNPMP52272 730 aaKnown RBP eCLIP22.86■■□□□ 1.252e-7■■■■□ 24.8
SPG7-201ENST00000268704 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
SPG7-201ENST00000268704 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms