RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 HFM1A2PYH4 1435 aa26.39■■□□□ 1.82
SMARCC2-201ENST00000267064 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.81
SMARCC2-201ENST00000267064 PKD2Q13563 968 aa26.37■■□□□ 1.81
SMARCC2-201ENST00000267064 MIA2Q96PC5 1412 aa26.35■■□□□ 1.81
SMARCC2-201ENST00000267064 RAPGEF6Q8TEU7 1601 aa26.35■■□□□ 1.81
SMARCC2-201ENST00000267064 ACIN1Q9UKV3 1341 aaKnown RBP26.35■■□□□ 1.81
SMARCC2-201ENST00000267064 UACAQ9BZF9 1416 aa26.35■■□□□ 1.81
SMARCC2-201ENST00000267064 ANKRD30AQ9BXX3 1397 aa26.33■■□□□ 1.81
SMARCC2-201ENST00000267064 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
SMARCC2-201ENST00000267064 L3MBTL2Q969R5 705 aa26.31■■□□□ 1.8
SMARCC2-201ENST00000267064 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
SMARCC2-201ENST00000267064 TIMELESSQ9UNS1 1208 aa26.3■■□□□ 1.8
SMARCC2-201ENST00000267064 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
SMARCC2-201ENST00000267064 NUP155O75694 1391 aa26.29■■□□□ 1.8
SMARCC2-201ENST00000267064 ANP32CO43423 234 aa26.29■■□□□ 1.8
SMARCC2-201ENST00000267064 ATP10BO94823 1461 aa26.28■■□□□ 1.8
SMARCC2-201ENST00000267064 GTF3C3Q9Y5Q9 886 aa26.28■■□□□ 1.8
SMARCC2-201ENST00000267064 DAPK1P53355 1430 aa26.28■■□□□ 1.8
SMARCC2-201ENST00000267064 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
SMARCC2-201ENST00000267064 ABCC5O15440 1437 aa26.25■■□□□ 1.79
SMARCC2-201ENST00000267064 MAPKBP1O60336 1514 aa26.24■■□□□ 1.79
SMARCC2-201ENST00000267064 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.792e-6■■■■□ 25.7
SMARCC2-201ENST00000267064 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
SMARCC2-201ENST00000267064 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
SMARCC2-201ENST00000267064 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
SMARCC2-201ENST00000267064 LRRIQ1Q96JM4 1722 aa26.16■■□□□ 1.78
SMARCC2-201ENST00000267064 HSPA5P11021 654 aaKnown RBP26.15■■□□□ 1.78
SMARCC2-201ENST00000267064 KIF15Q9NS87 1388 aa26.13■■□□□ 1.77
SMARCC2-201ENST00000267064 ANKRD50Q9ULJ7 1429 aa26.13■■□□□ 1.77
SMARCC2-201ENST00000267064 AFAP1Q8N556 730 aa26.11■■□□□ 1.77
SMARCC2-201ENST00000267064 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
SMARCC2-201ENST00000267064 DCAF11Q8TEB1 546 aa26.1■■□□□ 1.77
SMARCC2-201ENST00000267064 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
SMARCC2-201ENST00000267064 C9orf84Q5VXU9 1444 aa26.08■■□□□ 1.77
SMARCC2-201ENST00000267064 TCOF1Q13428 1488 aaKnown RBP26.07■■□□□ 1.76
SMARCC2-201ENST00000267064 KIF14Q15058 1648 aa26.07■■□□□ 1.76
SMARCC2-201ENST00000267064 RSPH4AQ5TD94 716 aa26.06■■□□□ 1.76
SMARCC2-201ENST00000267064 CHGAP10645 457 aaKnown RBP26.06■■□□□ 1.76
SMARCC2-201ENST00000267064 SPAG9O60271 1321 aaKnown RBP26.05■■□□□ 1.76
SMARCC2-201ENST00000267064 CHD1O14646 1710 aa26.05■■□□□ 1.76
SMARCC2-201ENST00000267064 NCOA1Q15788 1441 aa26.05■■□□□ 1.76
SMARCC2-201ENST00000267064 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
SMARCC2-201ENST00000267064 ROCK1Q13464 1354 aa26.03■■□□□ 1.76
SMARCC2-201ENST00000267064 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
SMARCC2-201ENST00000267064 SENP3Q9H4L4 574 aaPredicted RBP26.01■■□□□ 1.75
SMARCC2-201ENST00000267064 CARD11Q9BXL7 1154 aa25.99■■□□□ 1.75
SMARCC2-201ENST00000267064 KIF3BO15066 747 aa25.97■■□□□ 1.75
SMARCC2-201ENST00000267064 NBPF8Q3BBV2 869 aa25.96■■□□□ 1.75
SMARCC2-201ENST00000267064 ABCA8O94911 1581 aa25.94■■□□□ 1.74
SMARCC2-201ENST00000267064 GGT6Q6P531 493 aa25.91■■□□□ 1.74
SMARCC2-201ENST00000267064 KDM6BO15054 1643 aa25.91■■□□□ 1.74
SMARCC2-201ENST00000267064 ANKRD30BQ9BXX2 1392 aa25.89■■□□□ 1.73
SMARCC2-201ENST00000267064 FAM9BQ8IZU0 186 aa25.86■■□□□ 1.73
SMARCC2-201ENST00000267064 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
SMARCC2-201ENST00000267064 SENP3-EIF4A1A0A087X0R7 540 aa25.83■■□□□ 1.73
SMARCC2-201ENST00000267064 DNMT1P26358 1616 aaKnown RBP25.83■■□□□ 1.73
SMARCC2-201ENST00000267064 KIAA1107Q9UPP5 1409 aa25.83■■□□□ 1.72
SMARCC2-201ENST00000267064 ABCC2Q92887 1545 aa25.82■■□□□ 1.72
SMARCC2-201ENST00000267064 ITSN2Q9NZM3 1697 aa25.82■■□□□ 1.72
SMARCC2-201ENST00000267064 HNRNPUQ00839 825 aaKnown RBP eCLIP25.8■■□□□ 1.72
SMARCC2-201ENST00000267064 ABCC10Q5T3U5 1492 aa25.8■■□□□ 1.72
SMARCC2-201ENST00000267064 BCANQ96GW7 911 aa25.78■■□□□ 1.72
SMARCC2-201ENST00000267064 SYCP2Q9BX26 1530 aa25.78■■□□□ 1.72
SMARCC2-201ENST00000267064 NEFLP07196 543 aa25.78■■□□□ 1.72
SMARCC2-201ENST00000267064 CCDC144AA2RUR9 1427 aa25.77■■□□□ 1.72
SMARCC2-201ENST00000267064 SCAPERQ9BY12 1400 aa25.77■■□□□ 1.72
SMARCC2-201ENST00000267064 MRS2Q9HD23 443 aa25.76■■□□□ 1.71
SMARCC2-201ENST00000267064 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
SMARCC2-201ENST00000267064 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
SMARCC2-201ENST00000267064 KANK1Q14678 1352 aa25.72■■□□□ 1.71
SMARCC2-201ENST00000267064 ST20-MTHFSA0A0A6YYL1 179 aa25.72■■□□□ 1.71
SMARCC2-201ENST00000267064 ROCK2O75116 1388 aaKnown RBP25.71■■□□□ 1.71
SMARCC2-201ENST00000267064 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
SMARCC2-201ENST00000267064 PLCH2O75038 1416 aa25.7■■□□□ 1.71
SMARCC2-201ENST00000267064 C11orf95C9JLR9 678 aaPredicted RBP25.69■■□□□ 1.7
SMARCC2-201ENST00000267064 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
SMARCC2-201ENST00000267064 TRAPPC8Q9Y2L5 1435 aa25.69■■□□□ 1.7
SMARCC2-201ENST00000267064 RPRD2Q5VT52 1461 aaKnown RBP25.68■■□□□ 1.7
SMARCC2-201ENST00000267064 USP47Q96K76 1375 aa25.67■■□□□ 1.7
SMARCC2-201ENST00000267064 PZPP20742 1482 aa25.67■■□□□ 1.7
SMARCC2-201ENST00000267064 ASXL2Q76L83 1435 aa25.67■■□□□ 1.7
SMARCC2-201ENST00000267064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.66■■□□□ 1.76e-6■■□□□ 13.3
SMARCC2-201ENST00000267064 MLECQ14165 292 aa25.66■■□□□ 1.7
SMARCC2-201ENST00000267064 FAM69CQ0P6D2 419 aa25.66■■□□□ 1.7
SMARCC2-201ENST00000267064 MBD5Q9P267 1494 aa25.64■■□□□ 1.7
SMARCC2-201ENST00000267064 GCC2Q8IWJ2 1684 aa25.64■■□□□ 1.7
SMARCC2-201ENST00000267064 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
SMARCC2-201ENST00000267064 TTC37Q6PGP7 1564 aa25.63■■□□□ 1.69
SMARCC2-201ENST00000267064 FANCAO15360 1455 aa25.62■■□□□ 1.69
SMARCC2-201ENST00000267064 KIF7Q2M1P5 1343 aa25.62■■□□□ 1.69
SMARCC2-201ENST00000267064 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
SMARCC2-201ENST00000267064 WDR7Q9Y4E6 1490 aa25.6■■□□□ 1.69
SMARCC2-201ENST00000267064 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
SMARCC2-201ENST00000267064 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
SMARCC2-201ENST00000267064 WASHC2CQ9Y4E1 1318 aa25.6■■□□□ 1.69
SMARCC2-201ENST00000267064 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
SMARCC2-201ENST00000267064 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
SMARCC2-201ENST00000267064 SALL2Q9Y467 1007 aaPredicted RBP25.58■■□□□ 1.69
SMARCC2-201ENST00000267064 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
SMARCC2-201ENST00000267064 CCER2I3L3R5 266 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms