RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
COPS4-201ENST00000264389 KCNA4P22459 653 aa12.44□□□□□ -0.42
COPS4-201ENST00000264389 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
COPS4-201ENST00000264389 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
COPS4-201ENST00000264389 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
COPS4-201ENST00000264389 GPATCH8Q9UKJ3 1502 aaKnown RBP12.44□□□□□ -0.42
COPS4-201ENST00000264389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.43□□□□□ -0.42
COPS4-201ENST00000264389 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
COPS4-201ENST00000264389 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
COPS4-201ENST00000264389 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
COPS4-201ENST00000264389 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
COPS4-201ENST00000264389 SETD5Q9C0A6 1442 aa12.39□□□□□ -0.43
COPS4-201ENST00000264389 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
COPS4-201ENST00000264389 DAPK1P53355 1430 aa12.39□□□□□ -0.43
COPS4-201ENST00000264389 PTPRKQ15262 1439 aa12.39□□□□□ -0.43
COPS4-201ENST00000264389 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
COPS4-201ENST00000264389 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
COPS4-201ENST00000264389 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
COPS4-201ENST00000264389 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
COPS4-201ENST00000264389 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
COPS4-201ENST00000264389 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
COPS4-201ENST00000264389 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
COPS4-201ENST00000264389 ARHGEF5Q12774 1597 aa12.36□□□□□ -0.43
COPS4-201ENST00000264389 ABCC5O15440 1437 aa12.34□□□□□ -0.43
COPS4-201ENST00000264389 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
COPS4-201ENST00000264389 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
COPS4-201ENST00000264389 ASXL2Q76L83 1435 aa12.33□□□□□ -0.44
COPS4-201ENST00000264389 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
COPS4-201ENST00000264389 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
COPS4-201ENST00000264389 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
COPS4-201ENST00000264389 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
COPS4-201ENST00000264389 SYCP2Q9BX26 1530 aa12.33□□□□□ -0.44
COPS4-201ENST00000264389 NAIPQ13075 1403 aa12.33□□□□□ -0.44
COPS4-201ENST00000264389 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
COPS4-201ENST00000264389 ROCK1Q13464 1354 aa12.31□□□□□ -0.44
COPS4-201ENST00000264389 KDM6BO15054 1643 aa12.3□□□□□ -0.44
COPS4-201ENST00000264389 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
COPS4-201ENST00000264389 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
COPS4-201ENST00000264389 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
COPS4-201ENST00000264389 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
COPS4-201ENST00000264389 ABCC1P33527 1531 aa12.3□□□□□ -0.44
COPS4-201ENST00000264389 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
COPS4-201ENST00000264389 PLCH2O75038 1416 aa12.29□□□□□ -0.44
COPS4-201ENST00000264389 MAPKBP1O60336 1514 aa12.29□□□□□ -0.44
COPS4-201ENST00000264389 CFAP74Q9C0B2 1584 aa12.28□□□□□ -0.44
COPS4-201ENST00000264389 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
COPS4-201ENST00000264389 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
COPS4-201ENST00000264389 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
COPS4-201ENST00000264389 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
COPS4-201ENST00000264389 RRP7BPQ9NSQ0 103 aa12.26□□□□□ -0.45
COPS4-201ENST00000264389 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
COPS4-201ENST00000264389 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
COPS4-201ENST00000264389 ANKRD30AQ9BXX3 1397 aa12.24□□□□□ -0.45
COPS4-201ENST00000264389 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
COPS4-201ENST00000264389 FANCAO15360 1455 aa12.23□□□□□ -0.45
COPS4-201ENST00000264389 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
COPS4-201ENST00000264389 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
COPS4-201ENST00000264389 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
COPS4-201ENST00000264389 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
COPS4-201ENST00000264389 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
COPS4-201ENST00000264389 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
COPS4-201ENST00000264389 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
COPS4-201ENST00000264389 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
COPS4-201ENST00000264389 DIP2BQ9P265 1576 aa12.2□□□□□ -0.46
COPS4-201ENST00000264389 ADGRL1O94910 1474 aa12.2□□□□□ -0.46
COPS4-201ENST00000264389 GLI2P10070 1586 aa12.19□□□□□ -0.46
COPS4-201ENST00000264389 INO80Q9ULG1 1556 aaPredicted RBP12.19□□□□□ -0.46
COPS4-201ENST00000264389 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
COPS4-201ENST00000264389 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
COPS4-201ENST00000264389 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
COPS4-201ENST00000264389 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
COPS4-201ENST00000264389 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
COPS4-201ENST00000264389 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 TRIM52Q96A61 297 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 UNC13BO14795 1591 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 KIF13AQ9H1H9 1805 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
COPS4-201ENST00000264389 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
COPS4-201ENST00000264389 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
COPS4-201ENST00000264389 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
COPS4-201ENST00000264389 NEO1Q92859 1461 aa12.13□□□□□ -0.47
COPS4-201ENST00000264389 SCAPERQ9BY12 1400 aa12.13□□□□□ -0.47
COPS4-201ENST00000264389 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
COPS4-201ENST00000264389 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
COPS4-201ENST00000264389 PPRC1Q5VV67 1664 aaKnown RBP12.12□□□□□ -0.47
COPS4-201ENST00000264389 KDM5CP41229 1560 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 RTEL1-TNFRSF6BF6WH68 1400 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 PZPP20742 1482 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
COPS4-201ENST00000264389 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
COPS4-201ENST00000264389 IQGAP3Q86VI3 1631 aa12.1□□□□□ -0.47
COPS4-201ENST00000264389 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
COPS4-201ENST00000264389 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
COPS4-201ENST00000264389 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
COPS4-201ENST00000264389 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms