RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 HSPA5P11021 654 aaKnown RBP24.6■■□□□ 1.53
NECTIN1-201ENST00000264025 MLECQ14165 292 aa24.6■■□□□ 1.53
NECTIN1-201ENST00000264025 KTN1Q86UP2 1357 aaKnown RBP24.6■■□□□ 1.53
NECTIN1-201ENST00000264025 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
NECTIN1-201ENST00000264025 CUX2O14529 1486 aa24.59■■□□□ 1.53
NECTIN1-201ENST00000264025 CHAF1AQ13111 956 aaPredicted RBP24.58■■□□□ 1.53
NECTIN1-201ENST00000264025 IPO8O15397 1037 aaKnown RBP24.57■■□□□ 1.52
NECTIN1-201ENST00000264025 L1TD1Q5T7N2 865 aaKnown RBP24.57■■□□□ 1.52
NECTIN1-201ENST00000264025 HDGFL2Q7Z4V5 671 aaPredicted RBP24.57■■□□□ 1.52
NECTIN1-201ENST00000264025 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
NECTIN1-201ENST00000264025 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
NECTIN1-201ENST00000264025 PKD2Q13563 968 aa24.55■■□□□ 1.52
NECTIN1-201ENST00000264025 MSNP26038 577 aaKnown RBP24.52■■□□□ 1.52
NECTIN1-201ENST00000264025 SPRYD3Q8NCJ5 442 aa24.52■■□□□ 1.51
NECTIN1-201ENST00000264025 GGT6Q6P531 493 aa24.51■■□□□ 1.51
NECTIN1-201ENST00000264025 STK26Q9P289 416 aa24.51■■□□□ 1.51
NECTIN1-201ENST00000264025 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
NECTIN1-201ENST00000264025 KIAA1211Q6ZU35 1233 aa24.49■■□□□ 1.51
NECTIN1-201ENST00000264025 DRC7Q8IY82 874 aa24.48■■□□□ 1.51
NECTIN1-201ENST00000264025 APBB1O00213 710 aa24.46■■□□□ 1.51
NECTIN1-201ENST00000264025 SOGA1O94964 1423 aa24.46■■□□□ 1.51
NECTIN1-201ENST00000264025 GNL2Q13823 731 aaKnown RBP24.46■■□□□ 1.51
NECTIN1-201ENST00000264025 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
NECTIN1-201ENST00000264025 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
NECTIN1-201ENST00000264025 RALBP1Q15311 655 aa24.45■■□□□ 1.5
NECTIN1-201ENST00000264025 VPS8Q8N3P4 1428 aa24.45■■□□□ 1.5
NECTIN1-201ENST00000264025 ROCK2O75116 1388 aaKnown RBP24.45■■□□□ 1.5
NECTIN1-201ENST00000264025 RWDD1Q9H446 243 aaPredicted RBP24.45■■□□□ 1.5
NECTIN1-201ENST00000264025 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
NECTIN1-201ENST00000264025 RCAN3Q9UKA8 241 aa24.44■■□□□ 1.5
NECTIN1-201ENST00000264025 ISY1Q9ULR0 285 aaKnown RBP24.43■■□□□ 1.5
NECTIN1-201ENST00000264025 ITPRIPQ8IWB1 547 aa24.42■■□□□ 1.5
NECTIN1-201ENST00000264025 PTMSP20962 102 aa24.42■■□□□ 1.5
NECTIN1-201ENST00000264025 FOXD1Q16676 465 aa24.42■■□□□ 1.5
NECTIN1-201ENST00000264025 GBP4Q96PP9 640 aa24.41■■□□□ 1.5
NECTIN1-201ENST00000264025 CARMIL2Q6F5E8 1435 aa24.41■■□□□ 1.5
NECTIN1-201ENST00000264025 CLSTN1O94985 981 aa24.4■■□□□ 1.5
NECTIN1-201ENST00000264025 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
NECTIN1-201ENST00000264025 PAK3O75914 559 aaPredicted RBP24.38■■□□□ 1.49
NECTIN1-201ENST00000264025 CHMP4AQ9BY43 222 aa24.37■■□□□ 1.49
NECTIN1-201ENST00000264025 MPHOSPH9Q99550 1183 aa24.37■■□□□ 1.49
NECTIN1-201ENST00000264025 DEKP35659 375 aaKnown RBP24.37■■□□□ 1.49
NECTIN1-201ENST00000264025 NUP155O75694 1391 aa24.37■■□□□ 1.49
NECTIN1-201ENST00000264025 EIF3AQ14152 1382 aaKnown RBP24.36■■□□□ 1.49
NECTIN1-201ENST00000264025 TCERG1O14776 1098 aaKnown RBP24.35■■□□□ 1.49
NECTIN1-201ENST00000264025 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
NECTIN1-201ENST00000264025 ANKRD30AQ9BXX3 1397 aa24.34■■□□□ 1.49
NECTIN1-201ENST00000264025 HTATSF1O43719 755 aaKnown RBP24.34■■□□□ 1.49
NECTIN1-201ENST00000264025 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
NECTIN1-201ENST00000264025 EFCAB2Q5VUJ9 269 aa24.33■■□□□ 1.49
NECTIN1-201ENST00000264025 PMFBP1Q8TBY8 1022 aa24.33■■□□□ 1.49
NECTIN1-201ENST00000264025 STK31Q9BXU1 1019 aa24.32■■□□□ 1.48
NECTIN1-201ENST00000264025 SPAG9O60271 1321 aaKnown RBP24.32■■□□□ 1.48
NECTIN1-201ENST00000264025 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
NECTIN1-201ENST00000264025 RAB3GAP2Q9H2M9 1393 aa24.31■■□□□ 1.48
NECTIN1-201ENST00000264025 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
NECTIN1-201ENST00000264025 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
NECTIN1-201ENST00000264025 KIAA2012Q0VF49 1180 aa24.28■■□□□ 1.48
NECTIN1-201ENST00000264025 SYAP1Q96A49 352 aaPredicted RBP24.27■■□□□ 1.48
NECTIN1-201ENST00000264025 SLKQ9H2G2 1235 aaPredicted RBP24.27■■□□□ 1.48
NECTIN1-201ENST00000264025 SMC4Q9NTJ3 1288 aa24.27■■□□□ 1.48
NECTIN1-201ENST00000264025 HDAC5Q9UQL6 1122 aa24.27■■□□□ 1.48
NECTIN1-201ENST00000264025 TERF2IPQ9NYB0 399 aa24.26■■□□□ 1.47
NECTIN1-201ENST00000264025 GPATCH3Q96I76 525 aa24.26■■□□□ 1.47
NECTIN1-201ENST00000264025 HMMRO75330 724 aa24.25■■□□□ 1.47
NECTIN1-201ENST00000264025 GORABQ5T7V8 394 aa24.24■■□□□ 1.47
NECTIN1-201ENST00000264025 GZF1Q9H116 711 aaPredicted RBP24.23■■□□□ 1.47
NECTIN1-201ENST00000264025 MFAP1P55081 439 aaKnown RBP24.22■■□□□ 1.47
NECTIN1-201ENST00000264025 KIF3BO15066 747 aa24.2■■□□□ 1.46
NECTIN1-201ENST00000264025 TRIM6-TRIM34B2RNG4 842 aa24.19■■□□□ 1.46
NECTIN1-201ENST00000264025 TPM4P67936 248 aa24.19■■□□□ 1.46
NECTIN1-201ENST00000264025 CHMP3Q9Y3E7 222 aa24.19■■□□□ 1.46
NECTIN1-201ENST00000264025 TAF7LQ5H9L4 462 aa24.18■■□□□ 1.46
NECTIN1-201ENST00000264025 NLRP13Q86W25 1043 aa24.18■■□□□ 1.46
NECTIN1-201ENST00000264025 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
NECTIN1-201ENST00000264025 NCBP3Q53F19 620 aaKnown RBP24.17■■□□□ 1.46
NECTIN1-201ENST00000264025 CCDC34Q96HJ3 373 aa24.17■■□□□ 1.46
NECTIN1-201ENST00000264025 TMX4Q9H1E5 349 aaPredicted RBP24.17■■□□□ 1.46
NECTIN1-201ENST00000264025 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
NECTIN1-201ENST00000264025 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
NECTIN1-201ENST00000264025 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
NECTIN1-201ENST00000264025 HSP90B1P14625 803 aaKnown RBP24.16■■□□□ 1.46
NECTIN1-201ENST00000264025 L3MBTL2Q969R5 705 aa24.14■■□□□ 1.46
NECTIN1-201ENST00000264025 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
NECTIN1-201ENST00000264025 SLC4A10Q6U841 1118 aa24.14■■□□□ 1.46
NECTIN1-201ENST00000264025 CCDC146Q8IYE0 955 aa24.14■■□□□ 1.45
NECTIN1-201ENST00000264025 CLUAP1Q96AJ1 413 aa24.14■■□□□ 1.45
NECTIN1-201ENST00000264025 CSPP1Q1MSJ5 1256 aa24.13■■□□□ 1.45
NECTIN1-201ENST00000264025 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
NECTIN1-201ENST00000264025 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
NECTIN1-201ENST00000264025 EID1Q9Y6B2 187 aa24.12■■□□□ 1.45
NECTIN1-201ENST00000264025 GOLGA6L3A6NEY3 463 aa24.11■■□□□ 1.45
NECTIN1-201ENST00000264025 NGDNQ8NEJ9 315 aaKnown RBP24.11■■□□□ 1.45
NECTIN1-201ENST00000264025 PHLDB1Q86UU1 1377 aa24.11■■□□□ 1.45
NECTIN1-201ENST00000264025 RSPH4AQ5TD94 716 aa24.11■■□□□ 1.45
NECTIN1-201ENST00000264025 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
NECTIN1-201ENST00000264025 AMPHP49418 695 aa24.09■■□□□ 1.45
NECTIN1-201ENST00000264025 NOC3LQ8WTT2 800 aaKnown RBP24.09■■□□□ 1.45
NECTIN1-201ENST00000264025 IPO9Q96P70 1041 aaKnown RBP24.09■■□□□ 1.45
NECTIN1-201ENST00000264025 WASHC2CQ9Y4E1 1318 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms