RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GPATCH8Q9UKJ3 1502 aaKnown RBP14.88□□□□□ -0.03
SNRNP40-201ENST00000263694 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
SNRNP40-201ENST00000263694 RRBP1Q9P2E9 1410 aaKnown RBP14.87□□□□□ -0.03
SNRNP40-201ENST00000263694 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
SNRNP40-201ENST00000263694 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
SNRNP40-201ENST00000263694 ITGAEP38570 1179 aa14.85□□□□□ -0.03
SNRNP40-201ENST00000263694 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
SNRNP40-201ENST00000263694 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
SNRNP40-201ENST00000263694 CDC42BPBQ9Y5S2 1711 aa14.84□□□□□ -0.03
SNRNP40-201ENST00000263694 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.04
SNRNP40-201ENST00000263694 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.04
SNRNP40-201ENST00000263694 ITSN2Q9NZM3 1697 aa14.83□□□□□ -0.04
SNRNP40-201ENST00000263694 ABCA9Q8IUA7 1624 aa14.82□□□□□ -0.04
SNRNP40-201ENST00000263694 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
SNRNP40-201ENST00000263694 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
SNRNP40-201ENST00000263694 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
SNRNP40-201ENST00000263694 PLCH2O75038 1416 aa14.79□□□□□ -0.04
SNRNP40-201ENST00000263694 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
SNRNP40-201ENST00000263694 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
SNRNP40-201ENST00000263694 TCOF1Q13428 1488 aaKnown RBP14.78□□□□□ -0.04
SNRNP40-201ENST00000263694 DIP2BQ9P265 1576 aa14.78□□□□□ -0.04
SNRNP40-201ENST00000263694 CD109Q6YHK3 1445 aa14.77□□□□□ -0.05
SNRNP40-201ENST00000263694 SAMD9LQ8IVG5 1584 aa14.76□□□□□ -0.05
SNRNP40-201ENST00000263694 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
SNRNP40-201ENST00000263694 HNRNPMP52272 730 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNRNP40-201ENST00000263694 EFCAB2Q5VUJ9 269 aa14.75□□□□□ -0.05
SNRNP40-201ENST00000263694 TSPOAP1O95153 1857 aa14.75□□□□□ -0.05
SNRNP40-201ENST00000263694 GLI2P10070 1586 aa14.74□□□□□ -0.05
SNRNP40-201ENST00000263694 PTPRKQ15262 1439 aa14.74□□□□□ -0.05
SNRNP40-201ENST00000263694 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
SNRNP40-201ENST00000263694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNRNP40-201ENST00000263694 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
SNRNP40-201ENST00000263694 FANCAO15360 1455 aa14.72□□□□□ -0.05
SNRNP40-201ENST00000263694 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
SNRNP40-201ENST00000263694 ARAP3Q8WWN8 1544 aa14.7□□□□□ -0.06
SNRNP40-201ENST00000263694 SYCP2Q9BX26 1530 aa14.7□□□□□ -0.06
SNRNP40-201ENST00000263694 ARHGEF12Q9NZN5 1544 aa14.7□□□□□ -0.06
SNRNP40-201ENST00000263694 ABCC5O15440 1437 aa14.7□□□□□ -0.06
SNRNP40-201ENST00000263694 DAPK1P53355 1430 aa14.69□□□□□ -0.06
SNRNP40-201ENST00000263694 MBD5Q9P267 1494 aa14.69□□□□□ -0.06
SNRNP40-201ENST00000263694 DNMT1P26358 1616 aaKnown RBP14.69□□□□□ -0.06
SNRNP40-201ENST00000263694 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
SNRNP40-201ENST00000263694 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
SNRNP40-201ENST00000263694 AKNAQ7Z591 1439 aa14.67□□□□□ -0.06
SNRNP40-201ENST00000263694 ABCC1P33527 1531 aa14.67□□□□□ -0.06
SNRNP40-201ENST00000263694 ADGRL1O94910 1474 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 SCAPERQ9BY12 1400 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 PLEKHH2Q8IVE3 1493 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
SNRNP40-201ENST00000263694 AFAP1Q8N556 730 aa14.64□□□□□ -0.07
SNRNP40-201ENST00000263694 CROCC2H7BZ55 1655 aa14.64□□□□□ -0.07
SNRNP40-201ENST00000263694 ARHGEF5Q12774 1597 aa14.64□□□□□ -0.07
SNRNP40-201ENST00000263694 CFAP74Q9C0B2 1584 aa14.63□□□□□ -0.07
SNRNP40-201ENST00000263694 CCDC141Q6ZP82 1450 aa14.62□□□□□ -0.07
SNRNP40-201ENST00000263694 TSPY4P0CV99 314 aa14.62□□□□□ -0.07
SNRNP40-201ENST00000263694 TSPY10P0CW01 314 aa14.62□□□□□ -0.07
SNRNP40-201ENST00000263694 NEO1Q92859 1461 aa14.62□□□□□ -0.07
SNRNP40-201ENST00000263694 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
SNRNP40-201ENST00000263694 C9orf84Q5VXU9 1444 aa14.61□□□□□ -0.07
SNRNP40-201ENST00000263694 RAPGEF3O95398 923 aa14.6□□□□□ -0.07
SNRNP40-201ENST00000263694 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
SNRNP40-201ENST00000263694 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
SNRNP40-201ENST00000263694 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.07
SNRNP40-201ENST00000263694 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.08
SNRNP40-201ENST00000263694 NAIPQ13075 1403 aa14.57□□□□□ -0.08
SNRNP40-201ENST00000263694 NCOA1Q15788 1441 aa14.57□□□□□ -0.08
SNRNP40-201ENST00000263694 SETD5Q9C0A6 1442 aa14.57□□□□□ -0.08
SNRNP40-201ENST00000263694 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
SNRNP40-201ENST00000263694 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
SNRNP40-201ENST00000263694 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 HFM1A2PYH4 1435 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 KDM6BO15054 1643 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 ROCK1Q13464 1354 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 ANKRD30AQ9BXX3 1397 aa14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
SNRNP40-201ENST00000263694 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
SNRNP40-201ENST00000263694 COL17A1Q9UMD9 1497 aaPredicted RBP14.55□□□□□ -0.08
SNRNP40-201ENST00000263694 MAST1Q9Y2H9 1570 aa14.54□□□□□ -0.08
SNRNP40-201ENST00000263694 ZNF518AQ6AHZ1 1483 aa14.54□□□□□ -0.08
SNRNP40-201ENST00000263694 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
SNRNP40-201ENST00000263694 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
SNRNP40-201ENST00000263694 GCC2Q8IWJ2 1684 aa14.54□□□□□ -0.08
SNRNP40-201ENST00000263694 FRMPD1Q5SYB0 1578 aa14.52□□□□□ -0.08
SNRNP40-201ENST00000263694 ATP7AQ04656 1500 aa14.52□□□□□ -0.09
SNRNP40-201ENST00000263694 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.09
SNRNP40-201ENST00000263694 KIF15Q9NS87 1388 aa14.52□□□□□ -0.09
SNRNP40-201ENST00000263694 KIDINS220Q9ULH0 1771 aa14.51□□□□□ -0.09
SNRNP40-201ENST00000263694 KDM5CP41229 1560 aa14.51□□□□□ -0.09
SNRNP40-201ENST00000263694 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
SNRNP40-201ENST00000263694 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
SNRNP40-201ENST00000263694 PLXNC1O60486 1568 aa14.49□□□□□ -0.09
SNRNP40-201ENST00000263694 HECW2Q9P2P5 1572 aa14.48□□□□□ -0.09
SNRNP40-201ENST00000263694 ANKRD50Q9ULJ7 1429 aa14.47□□□□□ -0.09
SNRNP40-201ENST00000263694 MLH3Q9UHC1 1453 aa14.47□□□□□ -0.09
SNRNP40-201ENST00000263694 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
SNRNP40-201ENST00000263694 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms