RNA–Protein interactions for RNA: ENST00000263087.8

ITGAE-201, Transcript of integrin subunit alpha E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGAE, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-201ENST00000263087 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
ITGAE-201ENST00000263087 PLIN1O60240 522 aa13.87□□□□□ -0.19
ITGAE-201ENST00000263087 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
ITGAE-201ENST00000263087 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
ITGAE-201ENST00000263087 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
ITGAE-201ENST00000263087 ST20-MTHFSA0A0A6YYL1 179 aa13.86□□□□□ -0.19
ITGAE-201ENST00000263087 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
ITGAE-201ENST00000263087 NUP155O75694 1391 aa13.84□□□□□ -0.19
ITGAE-201ENST00000263087 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
ITGAE-201ENST00000263087 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
ITGAE-201ENST00000263087 GSE1Q14687 1217 aa13.83□□□□□ -0.2
ITGAE-201ENST00000263087 LRRC9Q6ZRR7 1453 aa13.83□□□□□ -0.2
ITGAE-201ENST00000263087 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
ITGAE-201ENST00000263087 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
ITGAE-201ENST00000263087 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
ITGAE-201ENST00000263087 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
ITGAE-201ENST00000263087 BECN1Q14457 450 aa13.81□□□□□ -0.2
ITGAE-201ENST00000263087 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
ITGAE-201ENST00000263087 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
ITGAE-201ENST00000263087 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
ITGAE-201ENST00000263087 RRP1P56182 461 aaKnown RBP13.81□□□□□ -0.2
ITGAE-201ENST00000263087 NAP1L5Q96NT1 182 aaPredicted RBP13.81□□□□□ -0.2
ITGAE-201ENST00000263087 CNTLNQ9NXG0 1405 aa13.8□□□□□ -0.2
ITGAE-201ENST00000263087 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
ITGAE-201ENST00000263087 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
ITGAE-201ENST00000263087 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
ITGAE-201ENST00000263087 CCDC146Q8IYE0 955 aa13.78□□□□□ -0.2
ITGAE-201ENST00000263087 C11orf95C9JLR9 678 aaPredicted RBP13.77□□□□□ -0.21
ITGAE-201ENST00000263087 SLKQ9H2G2 1235 aaPredicted RBP13.77□□□□□ -0.21
ITGAE-201ENST00000263087 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
ITGAE-201ENST00000263087 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
ITGAE-201ENST00000263087 ROCK2O75116 1388 aaKnown RBP13.75□□□□□ -0.21
ITGAE-201ENST00000263087 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
ITGAE-201ENST00000263087 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
ITGAE-201ENST00000263087 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
ITGAE-201ENST00000263087 TMF1P82094 1093 aa13.73□□□□□ -0.21
ITGAE-201ENST00000263087 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
ITGAE-201ENST00000263087 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
ITGAE-201ENST00000263087 MS4A1P11836 297 aa13.73□□□□□ -0.21
ITGAE-201ENST00000263087 RALBP1Q15311 655 aa13.73□□□□□ -0.21
ITGAE-201ENST00000263087 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
ITGAE-201ENST00000263087 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
ITGAE-201ENST00000263087 NLRP13Q86W25 1043 aa13.71□□□□□ -0.21
ITGAE-201ENST00000263087 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.22
ITGAE-201ENST00000263087 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.22
ITGAE-201ENST00000263087 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
ITGAE-201ENST00000263087 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
ITGAE-201ENST00000263087 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
ITGAE-201ENST00000263087 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
ITGAE-201ENST00000263087 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
ITGAE-201ENST00000263087 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
ITGAE-201ENST00000263087 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
ITGAE-201ENST00000263087 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
ITGAE-201ENST00000263087 USP47Q96K76 1375 aa13.69□□□□□ -0.22
ITGAE-201ENST00000263087 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
ITGAE-201ENST00000263087 PANK3Q9H999 370 aa13.69□□□□□ -0.22
ITGAE-201ENST00000263087 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
ITGAE-201ENST00000263087 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
ITGAE-201ENST00000263087 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
ITGAE-201ENST00000263087 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
ITGAE-201ENST00000263087 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
ITGAE-201ENST00000263087 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
ITGAE-201ENST00000263087 FTSJ3Q8IY81 847 aaKnown RBP13.67□□□□□ -0.22
ITGAE-201ENST00000263087 BCL2L13Q9BXK5 485 aa13.67□□□□□ -0.22
ITGAE-201ENST00000263087 CUX1P39880 1505 aa13.67□□□□□ -0.22
ITGAE-201ENST00000263087 CFTRP13569 1480 aa13.67□□□□□ -0.22
ITGAE-201ENST00000263087 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
ITGAE-201ENST00000263087 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
ITGAE-201ENST00000263087 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
ITGAE-201ENST00000263087 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
ITGAE-201ENST00000263087 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
ITGAE-201ENST00000263087 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
ITGAE-201ENST00000263087 STK26Q9P289 416 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 GGT6Q6P531 493 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
ITGAE-201ENST00000263087 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.23
ITGAE-201ENST00000263087 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
ITGAE-201ENST00000263087 NESP48681 1621 aa13.64□□□□□ -0.23
ITGAE-201ENST00000263087 TOP2BQ02880 1626 aa13.63□□□□□ -0.23
ITGAE-201ENST00000263087 SOX12O15370 315 aa13.63□□□□□ -0.23
ITGAE-201ENST00000263087 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
ITGAE-201ENST00000263087 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
ITGAE-201ENST00000263087 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
ITGAE-201ENST00000263087 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
ITGAE-201ENST00000263087 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
ITGAE-201ENST00000263087 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
ITGAE-201ENST00000263087 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
ITGAE-201ENST00000263087 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
ITGAE-201ENST00000263087 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
ITGAE-201ENST00000263087 CFAP53Q96M91 514 aa13.6□□□□□ -0.23
ITGAE-201ENST00000263087 NAIPQ13075 1403 aa13.59□□□□□ -0.23
ITGAE-201ENST00000263087 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
ITGAE-201ENST00000263087 KIF3BO15066 747 aa13.58□□□□□ -0.24
ITGAE-201ENST00000263087 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
ITGAE-201ENST00000263087 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
ITGAE-201ENST00000263087 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
ITGAE-201ENST00000263087 NCAPD3P42695 1498 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms