RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
TTC39A-202ENST00000262676 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
TTC39A-202ENST00000262676 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
TTC39A-202ENST00000262676 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
TTC39A-202ENST00000262676 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-202ENST00000262676 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
TTC39A-202ENST00000262676 U2SURPO15042 1029 aaKnown RBP16.46■□□□□ 0.23
TTC39A-202ENST00000262676 CFAP53Q96M91 514 aa16.46■□□□□ 0.23
TTC39A-202ENST00000262676 NOC3LQ8WTT2 800 aaKnown RBP16.46■□□□□ 0.23
TTC39A-202ENST00000262676 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
TTC39A-202ENST00000262676 HSCBQ8IWL3 235 aa16.46■□□□□ 0.22
TTC39A-202ENST00000262676 KIF3BO15066 747 aa16.44■□□□□ 0.22
TTC39A-202ENST00000262676 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
TTC39A-202ENST00000262676 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
TTC39A-202ENST00000262676 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
TTC39A-202ENST00000262676 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
TTC39A-202ENST00000262676 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
TTC39A-202ENST00000262676 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
TTC39A-202ENST00000262676 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
TTC39A-202ENST00000262676 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
TTC39A-202ENST00000262676 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
TTC39A-202ENST00000262676 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
TTC39A-202ENST00000262676 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
TTC39A-202ENST00000262676 PRM3Q9NNZ6 103 aa16.4■□□□□ 0.22
TTC39A-202ENST00000262676 PDE4CQ08493 712 aa16.39■□□□□ 0.21
TTC39A-202ENST00000262676 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
TTC39A-202ENST00000262676 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
TTC39A-202ENST00000262676 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
TTC39A-202ENST00000262676 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
TTC39A-202ENST00000262676 GZF1Q9H116 711 aaPredicted RBP16.37■□□□□ 0.21
TTC39A-202ENST00000262676 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
TTC39A-202ENST00000262676 FOXD1Q16676 465 aa16.37■□□□□ 0.21
TTC39A-202ENST00000262676 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
TTC39A-202ENST00000262676 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
TTC39A-202ENST00000262676 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
TTC39A-202ENST00000262676 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.21
TTC39A-202ENST00000262676 MSH5O43196 834 aa16.33■□□□□ 0.21
TTC39A-202ENST00000262676 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.2
TTC39A-202ENST00000262676 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
TTC39A-202ENST00000262676 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
TTC39A-202ENST00000262676 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-202ENST00000262676 MCCP23508 829 aa16.31■□□□□ 0.2
TTC39A-202ENST00000262676 GOLGA6L1Q8N7Z2 621 aa16.3■□□□□ 0.2
TTC39A-202ENST00000262676 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
TTC39A-202ENST00000262676 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
TTC39A-202ENST00000262676 EEA1Q15075 1411 aa16.29■□□□□ 0.2
TTC39A-202ENST00000262676 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
TTC39A-202ENST00000262676 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
TTC39A-202ENST00000262676 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
TTC39A-202ENST00000262676 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
TTC39A-202ENST00000262676 PKD2Q13563 968 aa16.26■□□□□ 0.19
TTC39A-202ENST00000262676 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
TTC39A-202ENST00000262676 CHMP4BQ9H444 224 aaKnown RBP16.25■□□□□ 0.19
TTC39A-202ENST00000262676 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
TTC39A-202ENST00000262676 APBB1O00213 710 aa16.23■□□□□ 0.19
TTC39A-202ENST00000262676 ANO8Q9HCE9 1232 aaPredicted RBP16.23■□□□□ 0.19
TTC39A-202ENST00000262676 EVA1CP58658 441 aa16.23■□□□□ 0.19
TTC39A-202ENST00000262676 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
TTC39A-202ENST00000262676 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
TTC39A-202ENST00000262676 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
TTC39A-202ENST00000262676 GBP4Q96PP9 640 aa16.22■□□□□ 0.19
TTC39A-202ENST00000262676 MS4A1P11836 297 aa16.21■□□□□ 0.19
TTC39A-202ENST00000262676 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
TTC39A-202ENST00000262676 MORC1Q86VD1 984 aa16.21■□□□□ 0.18
TTC39A-202ENST00000262676 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
TTC39A-202ENST00000262676 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
TTC39A-202ENST00000262676 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
TTC39A-202ENST00000262676 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-202ENST00000262676 TMF1P82094 1093 aa16.19■□□□□ 0.18
TTC39A-202ENST00000262676 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
TTC39A-202ENST00000262676 CALRP27797 417 aaKnown RBP16.18■□□□□ 0.18
TTC39A-202ENST00000262676 TPM4P67936 248 aa16.18■□□□□ 0.18
TTC39A-202ENST00000262676 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
TTC39A-202ENST00000262676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
TTC39A-202ENST00000262676 G3V3G9 751 aa16.16■□□□□ 0.18
TTC39A-202ENST00000262676 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
TTC39A-202ENST00000262676 NUP155O75694 1391 aa16.16■□□□□ 0.18
TTC39A-202ENST00000262676 PTMSP20962 102 aa16.16■□□□□ 0.18
TTC39A-202ENST00000262676 PTPRGP23470 1445 aa16.16■□□□□ 0.18
TTC39A-202ENST00000262676 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
TTC39A-202ENST00000262676 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
TTC39A-202ENST00000262676 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
TTC39A-202ENST00000262676 HSP90AA2PQ14568 343 aaPredicted RBP16.15■□□□□ 0.18
TTC39A-202ENST00000262676 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-202ENST00000262676 SYTL4Q96C24 671 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-202ENST00000262676 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
TTC39A-202ENST00000262676 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
TTC39A-202ENST00000262676 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
TTC39A-202ENST00000262676 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-202ENST00000262676 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
TTC39A-202ENST00000262676 AMPHP49418 695 aa16.11■□□□□ 0.17
TTC39A-202ENST00000262676 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
TTC39A-202ENST00000262676 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
TTC39A-202ENST00000262676 HTATSF1O43719 755 aaKnown RBP16.1■□□□□ 0.17
TTC39A-202ENST00000262676 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
TTC39A-202ENST00000262676 CHMP3Q9Y3E7 222 aa16.1■□□□□ 0.17
TTC39A-202ENST00000262676 NOL8Q76FK4 1167 aaKnown RBP16.08■□□□□ 0.16
TTC39A-202ENST00000262676 WIZO95785 1651 aa16.08■□□□□ 0.16
TTC39A-202ENST00000262676 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
TTC39A-202ENST00000262676 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms