RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 CD109Q6YHK3 1445 aa8.64□□□□□ -1.03
ITCH-201ENST00000262650 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
ITCH-201ENST00000262650 RICTORQ6R327 1708 aa8.62□□□□□ -1.03
ITCH-201ENST00000262650 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
ITCH-201ENST00000262650 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
ITCH-201ENST00000262650 NUP153P49790 1475 aaKnown RBP8.61□□□□□ -1.03
ITCH-201ENST00000262650 ZMYM4Q5VZL5 1548 aa8.6□□□□□ -1.03
ITCH-201ENST00000262650 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
ITCH-201ENST00000262650 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
ITCH-201ENST00000262650 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
ITCH-201ENST00000262650 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
ITCH-201ENST00000262650 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
ITCH-201ENST00000262650 FHOD3Q2V2M9 1422 aa8.56□□□□□ -1.04
ITCH-201ENST00000262650 PDE4CQ08493 712 aa8.56□□□□□ -1.04
ITCH-201ENST00000262650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.04
ITCH-201ENST00000262650 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
ITCH-201ENST00000262650 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
ITCH-201ENST00000262650 TTC37Q6PGP7 1564 aa8.54□□□□□ -1.04
ITCH-201ENST00000262650 MAGI2Q86UL8 1455 aa8.54□□□□□ -1.04
ITCH-201ENST00000262650 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
ITCH-201ENST00000262650 SIGLEC1Q9BZZ2 1709 aa8.53□□□□□ -1.04
ITCH-201ENST00000262650 MYO5CQ9NQX4 1742 aa8.53□□□□□ -1.04
ITCH-201ENST00000262650 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
ITCH-201ENST00000262650 REREQ9P2R6 1566 aa8.52□□□□□ -1.05
ITCH-201ENST00000262650 MADDQ8WXG6 1647 aa8.51□□□□□ -1.05
ITCH-201ENST00000262650 PTPRMP28827 1452 aa8.51□□□□□ -1.05
ITCH-201ENST00000262650 DENND4BO75064 1496 aaPredicted RBP8.49□□□□□ -1.05
ITCH-201ENST00000262650 KDM5CP41229 1560 aa8.49□□□□□ -1.05
ITCH-201ENST00000262650 AKNAQ7Z591 1439 aa8.49□□□□□ -1.05
ITCH-201ENST00000262650 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
ITCH-201ENST00000262650 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
ITCH-201ENST00000262650 PLCH2O75038 1416 aa8.48□□□□□ -1.05
ITCH-201ENST00000262650 TAF7LQ5H9L4 462 aa8.48□□□□□ -1.05
ITCH-201ENST00000262650 CDK11AQ9UQ88 783 aaPredicted RBP8.48□□□□□ -1.05
ITCH-201ENST00000262650 ZFYVE16Q7Z3T8 1539 aa8.48□□□□□ -1.05
ITCH-201ENST00000262650 FANCAO15360 1455 aa8.48□□□□□ -1.05
ITCH-201ENST00000262650 ARHGAP35Q9NRY4 1499 aa8.48□□□□□ -1.05
ITCH-201ENST00000262650 CDK11BP21127 795 aaKnown RBP8.48□□□□□ -1.05
ITCH-201ENST00000262650 DHX37Q8IY37 1157 aaKnown RBP8.48□□□□□ -1.05
ITCH-201ENST00000262650 RIMS1Q86UR5 1692 aaKnown RBP8.47□□□□□ -1.05
ITCH-201ENST00000262650 CDC42BPBQ9Y5S2 1711 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 FMN1Q68DA7 1419 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 ARHGEF12Q9NZN5 1544 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 PCF11O94913 1555 aaKnown RBP8.47□□□□□ -1.05
ITCH-201ENST00000262650 ZBTB22O15209 634 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 FER1L4A9Z1Z3 1794 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 NEFLP07196 543 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
ITCH-201ENST00000262650 PREX2Q70Z35 1606 aa8.46□□□□□ -1.05
ITCH-201ENST00000262650 KIF14Q15058 1648 aa8.46□□□□□ -1.06
ITCH-201ENST00000262650 PPP6R1Q9UPN7 881 aa8.46□□□□□ -1.06
ITCH-201ENST00000262650 CDK13Q14004 1512 aaKnown RBP8.46□□□□□ -1.06
ITCH-201ENST00000262650 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
ITCH-201ENST00000262650 PKNOX2Q96KN3 472 aa8.45□□□□□ -1.06
ITCH-201ENST00000262650 ITSN2Q9NZM3 1697 aa8.45□□□□□ -1.06
ITCH-201ENST00000262650 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
ITCH-201ENST00000262650 AGLP35573 1532 aa8.43□□□□□ -1.06
ITCH-201ENST00000262650 PLEKHD1A6NEE1 506 aa8.43□□□□□ -1.06
ITCH-201ENST00000262650 CDC42BPAQ5VT25 1732 aa8.43□□□□□ -1.06
ITCH-201ENST00000262650 TROQ12816 1431 aaPredicted RBP8.43□□□□□ -1.06
ITCH-201ENST00000262650 CCDC18Q5T9S5 1454 aa8.43□□□□□ -1.06
ITCH-201ENST00000262650 ATP10AO60312 1499 aa8.42□□□□□ -1.06
ITCH-201ENST00000262650 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
ITCH-201ENST00000262650 DIP2CQ9Y2E4 1556 aa8.42□□□□□ -1.06
ITCH-201ENST00000262650 MROH2AA6NES4 1674 aa8.42□□□□□ -1.06
ITCH-201ENST00000262650 IGSF3O75054 1194 aa8.42□□□□□ -1.06
ITCH-201ENST00000262650 C9orf84Q5VXU9 1444 aa8.41□□□□□ -1.06
ITCH-201ENST00000262650 CASKIN1Q8WXD9 1431 aa8.41□□□□□ -1.06
ITCH-201ENST00000262650 MLH3Q9UHC1 1453 aa8.41□□□□□ -1.06
ITCH-201ENST00000262650 ABCC1P33527 1531 aa8.41□□□□□ -1.06
ITCH-201ENST00000262650 RAPGEF3O95398 923 aa8.41□□□□□ -1.06
ITCH-201ENST00000262650 ZNF518AQ6AHZ1 1483 aa8.4□□□□□ -1.06
ITCH-201ENST00000262650 ABCA6Q8N139 1617 aa8.4□□□□□ -1.06
ITCH-201ENST00000262650 ILDR1Q86SU0 546 aaPredicted RBP8.4□□□□□ -1.06
ITCH-201ENST00000262650 YEATS2Q9ULM3 1422 aa8.4□□□□□ -1.06
ITCH-201ENST00000262650 KIDINS220Q9ULH0 1771 aa8.4□□□□□ -1.07
ITCH-201ENST00000262650 SETD1BQ9UPS6 1966 aaKnown RBP8.39□□□□□ -1.07
ITCH-201ENST00000262650 FYCO1Q9BQS8 1478 aa8.39□□□□□ -1.07
ITCH-201ENST00000262650 SCAPERQ9BY12 1400 aa8.38□□□□□ -1.07
ITCH-201ENST00000262650 STRCQ7RTU9 1775 aa8.38□□□□□ -1.07
ITCH-201ENST00000262650 C3P01024 1663 aa8.38□□□□□ -1.07
ITCH-201ENST00000262650 CLIP1P30622 1438 aa8.37□□□□□ -1.07
ITCH-201ENST00000262650 PLXNC1O60486 1568 aa8.36□□□□□ -1.07
ITCH-201ENST00000262650 INO80Q9ULG1 1556 aaPredicted RBP8.36□□□□□ -1.07
ITCH-201ENST00000262650 SAMD9LQ8IVG5 1584 aa8.35□□□□□ -1.07
ITCH-201ENST00000262650 ARHGAP5Q13017 1502 aa8.35□□□□□ -1.07
ITCH-201ENST00000262650 HSP90B1P14625 803 aaKnown RBP8.35□□□□□ -1.07
ITCH-201ENST00000262650 EFCAB2Q5VUJ9 269 aa8.35□□□□□ -1.07
ITCH-201ENST00000262650 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
ITCH-201ENST00000262650 ZNF142P52746 1687 aaPredicted RBP8.35□□□□□ -1.07
ITCH-201ENST00000262650 ARID3CA6NKF2 412 aa8.34□□□□□ -1.07
ITCH-201ENST00000262650 FGD1P98174 961 aa8.34□□□□□ -1.07
ITCH-201ENST00000262650 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
ITCH-201ENST00000262650 ADGBQ8N7X0 1667 aa8.34□□□□□ -1.08
ITCH-201ENST00000262650 KIAA1107Q9UPP5 1409 aa8.33□□□□□ -1.08
ITCH-201ENST00000262650 FAM135AQ9P2D6 1515 aa8.33□□□□□ -1.08
ITCH-201ENST00000262650 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
ITCH-201ENST00000262650 IQSEC2Q5JU85 1478 aa8.32□□□□□ -1.08
ITCH-201ENST00000262650 PLEKHH2Q8IVE3 1493 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms