RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 SLC4A1APQ9BWU0 796 aaKnown RBP26.98■■□□□ 1.91
SMAD7-201ENST00000262158 TCOF1Q13428 1488 aaKnown RBP26.97■■□□□ 1.91
SMAD7-201ENST00000262158 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
SMAD7-201ENST00000262158 CCER2I3L3R5 266 aa26.96■■□□□ 1.91
SMAD7-201ENST00000262158 NUP153P49790 1475 aaKnown RBP26.95■■□□□ 1.91
SMAD7-201ENST00000262158 POLR3GLQ9BT43 218 aa26.93■■□□□ 1.9
SMAD7-201ENST00000262158 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
SMAD7-201ENST00000262158 ABCC5O15440 1437 aa26.92■■□□□ 1.9
SMAD7-201ENST00000262158 EIF4G2P78344 907 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMAD7-201ENST00000262158 DAPK1P53355 1430 aa26.92■■□□□ 1.9
SMAD7-201ENST00000262158 CFDP1Q9UEE9 299 aaPredicted RBP26.89■■□□□ 1.9
SMAD7-201ENST00000262158 KIAA0556O60303 1618 aa26.88■■□□□ 1.89
SMAD7-201ENST00000262158 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
SMAD7-201ENST00000262158 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
SMAD7-201ENST00000262158 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
SMAD7-201ENST00000262158 MIA2Q96PC5 1412 aa26.86■■□□□ 1.89
SMAD7-201ENST00000262158 KIAA0586Q9BVV6 1533 aa26.86■■□□□ 1.89
SMAD7-201ENST00000262158 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
SMAD7-201ENST00000262158 FAM9BQ8IZU0 186 aa26.85■■□□□ 1.89
SMAD7-201ENST00000262158 NEFLP07196 543 aa26.84■■□□□ 1.89
SMAD7-201ENST00000262158 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
SMAD7-201ENST00000262158 ANKRD30BQ9BXX2 1392 aa26.81■■□□□ 1.88
SMAD7-201ENST00000262158 CDK11AQ9UQ88 783 aaPredicted RBP26.79■■□□□ 1.88
SMAD7-201ENST00000262158 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
SMAD7-201ENST00000262158 RAPGEF6Q8TEU7 1601 aa26.78■■□□□ 1.88
SMAD7-201ENST00000262158 KIF14Q15058 1648 aa26.75■■□□□ 1.87
SMAD7-201ENST00000262158 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
SMAD7-201ENST00000262158 PKD2Q13563 968 aa26.73■■□□□ 1.87
SMAD7-201ENST00000262158 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
SMAD7-201ENST00000262158 CAMSAP2Q08AD1 1489 aa26.71■■□□□ 1.87
SMAD7-201ENST00000262158 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
SMAD7-201ENST00000262158 KIF7Q2M1P5 1343 aa26.7■■□□□ 1.87
SMAD7-201ENST00000262158 DNMT1P26358 1616 aaKnown RBP26.7■■□□□ 1.87
SMAD7-201ENST00000262158 MRS2Q9HD23 443 aa26.69■■□□□ 1.86
SMAD7-201ENST00000262158 RPRD2Q5VT52 1461 aaKnown RBP26.69■■□□□ 1.86
SMAD7-201ENST00000262158 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
SMAD7-201ENST00000262158 KDM2AQ9Y2K7 1162 aa26.68■■□□□ 1.86
SMAD7-201ENST00000262158 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
SMAD7-201ENST00000262158 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
SMAD7-201ENST00000262158 TEX14Q8IWB6 1497 aa26.67■■□□□ 1.86
SMAD7-201ENST00000262158 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
SMAD7-201ENST00000262158 HNRNPMP52272 730 aaKnown RBP eCLIP26.66■■□□□ 1.862e-6■■□□□ 12.3
SMAD7-201ENST00000262158 ROCK1Q13464 1354 aa26.66■■□□□ 1.86
SMAD7-201ENST00000262158 PZPP20742 1482 aa26.65■■□□□ 1.86
SMAD7-201ENST00000262158 NCOA1Q15788 1441 aa26.64■■□□□ 1.86
SMAD7-201ENST00000262158 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
SMAD7-201ENST00000262158 SYNJ2O15056 1496 aa26.58■■□□□ 1.85
SMAD7-201ENST00000262158 NUP155O75694 1391 aa26.55■■□□□ 1.84
SMAD7-201ENST00000262158 RBM19Q9Y4C8 960 aaKnown RBP26.54■■□□□ 1.84
SMAD7-201ENST00000262158 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
SMAD7-201ENST00000262158 SPATA31E1Q6ZUB1 1445 aa26.52■■□□□ 1.84
SMAD7-201ENST00000262158 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.84
SMAD7-201ENST00000262158 ANKRD50Q9ULJ7 1429 aa26.51■■□□□ 1.84
SMAD7-201ENST00000262158 ATP10BO94823 1461 aa26.5■■□□□ 1.83
SMAD7-201ENST00000262158 USP47Q96K76 1375 aa26.49■■□□□ 1.83
SMAD7-201ENST00000262158 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
SMAD7-201ENST00000262158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.83
SMAD7-201ENST00000262158 KIAA1107Q9UPP5 1409 aa26.48■■□□□ 1.83
SMAD7-201ENST00000262158 RGL3Q3MIN7 710 aa26.46■■□□□ 1.83
SMAD7-201ENST00000262158 DCAF11Q8TEB1 546 aa26.46■■□□□ 1.83
SMAD7-201ENST00000262158 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
SMAD7-201ENST00000262158 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
SMAD7-201ENST00000262158 CARD11Q9BXL7 1154 aa26.44■■□□□ 1.82
SMAD7-201ENST00000262158 NUP160Q12769 1436 aa26.43■■□□□ 1.82
SMAD7-201ENST00000262158 C9orf84Q5VXU9 1444 aa26.43■■□□□ 1.82
SMAD7-201ENST00000262158 B4GALNT3Q6L9W6 998 aa26.43■■□□□ 1.82
SMAD7-201ENST00000262158 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
SMAD7-201ENST00000262158 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
SMAD7-201ENST00000262158 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.81
SMAD7-201ENST00000262158 CDC42BPAQ5VT25 1732 aa26.38■■□□□ 1.81
SMAD7-201ENST00000262158 KIF15Q9NS87 1388 aa26.38■■□□□ 1.81
SMAD7-201ENST00000262158 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
SMAD7-201ENST00000262158 DHX29Q7Z478 1369 aaKnown RBP26.36■■□□□ 1.81
SMAD7-201ENST00000262158 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
SMAD7-201ENST00000262158 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
SMAD7-201ENST00000262158 PTPRGP23470 1445 aa26.34■■□□□ 1.81
SMAD7-201ENST00000262158 MBD5Q9P267 1494 aa26.33■■□□□ 1.81
SMAD7-201ENST00000262158 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
SMAD7-201ENST00000262158 CROCC2H7BZ55 1655 aa26.32■■□□□ 1.8
SMAD7-201ENST00000262158 ABCA8O94911 1581 aa26.32■■□□□ 1.8
SMAD7-201ENST00000262158 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
SMAD7-201ENST00000262158 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
SMAD7-201ENST00000262158 ZBED9Q6R2W3 1325 aa26.29■■□□□ 1.8
SMAD7-201ENST00000262158 ANP32EQ9BTT0 268 aa26.28■■□□□ 1.8
SMAD7-201ENST00000262158 MSH5O43196 834 aa26.25■■□□□ 1.79
SMAD7-201ENST00000262158 TMC1Q8TDI8 760 aa26.23■■□□□ 1.79
SMAD7-201ENST00000262158 KDM5CP41229 1560 aa26.22■■□□□ 1.79
SMAD7-201ENST00000262158 ERCC6L2Q5T890 1561 aa26.2■■□□□ 1.79
SMAD7-201ENST00000262158 ROCK2O75116 1388 aaKnown RBP26.2■■□□□ 1.79
SMAD7-201ENST00000262158 PPP4R2Q9NY27 417 aa26.19■■□□□ 1.78
SMAD7-201ENST00000262158 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
SMAD7-201ENST00000262158 SYCP2Q9BX26 1530 aa26.16■■□□□ 1.78
SMAD7-201ENST00000262158 PNISRQ8TF01 805 aaKnown RBP26.15■■□□□ 1.78
SMAD7-201ENST00000262158 CDC42BPBQ9Y5S2 1711 aa26.13■■□□□ 1.77
SMAD7-201ENST00000262158 POLR1AO95602 1720 aaPredicted RBP26.13■■□□□ 1.77
SMAD7-201ENST00000262158 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
SMAD7-201ENST00000262158 CC2D1BQ5T0F9 858 aaKnown RBP26.12■■□□□ 1.77
SMAD7-201ENST00000262158 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
SMAD7-201ENST00000262158 FAM135AQ9P2D6 1515 aa26.11■■□□□ 1.77
SMAD7-201ENST00000262158 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms