RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ZNF644Q9H582 1327 aaPredicted RBP26.73■■□□□ 1.87
SCARB1-201ENST00000261693 CCDC7Q96M83 1385 aa26.72■■□□□ 1.87
SCARB1-201ENST00000261693 PRKRIP1Q9H875 184 aaPredicted RBP26.71■■□□□ 1.87
SCARB1-201ENST00000261693 NCOA1Q15788 1441 aa26.7■■□□□ 1.86
SCARB1-201ENST00000261693 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
SCARB1-201ENST00000261693 ANKRD30BQ9BXX2 1392 aa26.69■■□□□ 1.86
SCARB1-201ENST00000261693 DAPK1P53355 1430 aa26.69■■□□□ 1.86
SCARB1-201ENST00000261693 MRS2Q9HD23 443 aa26.68■■□□□ 1.86
SCARB1-201ENST00000261693 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
SCARB1-201ENST00000261693 CDK11AQ9UQ88 783 aaPredicted RBP26.66■■□□□ 1.86
SCARB1-201ENST00000261693 RPRD2Q5VT52 1461 aaKnown RBP26.65■■□□□ 1.86
SCARB1-201ENST00000261693 ABCC5O15440 1437 aa26.64■■□□□ 1.86
SCARB1-201ENST00000261693 MSH5O43196 834 aa26.62■■□□□ 1.85
SCARB1-201ENST00000261693 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
SCARB1-201ENST00000261693 ROCK1Q13464 1354 aa26.61■■□□□ 1.85
SCARB1-201ENST00000261693 KIF7Q2M1P5 1343 aa26.61■■□□□ 1.85
SCARB1-201ENST00000261693 CNGB1Q14028 1251 aaPredicted RBP26.61■■□□□ 1.85
SCARB1-201ENST00000261693 DNMT1P26358 1616 aaKnown RBP26.59■■□□□ 1.85
SCARB1-201ENST00000261693 PPP4R2Q9NY27 417 aa26.55■■□□□ 1.84
SCARB1-201ENST00000261693 NUP153P49790 1475 aaKnown RBP26.55■■□□□ 1.84
SCARB1-201ENST00000261693 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
SCARB1-201ENST00000261693 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
SCARB1-201ENST00000261693 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
SCARB1-201ENST00000261693 ZBED9Q6R2W3 1325 aa26.53■■□□□ 1.84
SCARB1-201ENST00000261693 ZNF326Q5BKZ1 582 aaKnown RBP26.52■■□□□ 1.84
SCARB1-201ENST00000261693 POLR3GLQ9BT43 218 aa26.52■■□□□ 1.84
SCARB1-201ENST00000261693 KIAA0556O60303 1618 aa26.52■■□□□ 1.84
SCARB1-201ENST00000261693 B4GALNT3Q6L9W6 998 aa26.51■■□□□ 1.83
SCARB1-201ENST00000261693 ERICH6BQ5W0A0 696 aa26.5■■□□□ 1.83
SCARB1-201ENST00000261693 ZNF777Q9ULD5 760 aaPredicted RBP26.49■■□□□ 1.83
SCARB1-201ENST00000261693 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
SCARB1-201ENST00000261693 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
SCARB1-201ENST00000261693 CFDP1Q9UEE9 299 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-201ENST00000261693 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-201ENST00000261693 POLR1AO95602 1720 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-201ENST00000261693 KIAA0586Q9BVV6 1533 aa26.46■■□□□ 1.83
SCARB1-201ENST00000261693 PZPP20742 1482 aa26.46■■□□□ 1.83
SCARB1-201ENST00000261693 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
SCARB1-201ENST00000261693 CAMSAP2Q08AD1 1489 aa26.43■■□□□ 1.82
SCARB1-201ENST00000261693 SENP3-EIF4A1A0A087X0R7 540 aa26.41■■□□□ 1.82
SCARB1-201ENST00000261693 PKD2Q13563 968 aa26.39■■□□□ 1.82
SCARB1-201ENST00000261693 USP47Q96K76 1375 aa26.38■■□□□ 1.81
SCARB1-201ENST00000261693 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
SCARB1-201ENST00000261693 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-201ENST00000261693 DHX29Q7Z478 1369 aaKnown RBP26.37■■□□□ 1.81
SCARB1-201ENST00000261693 BCORL1Q5H9F3 1711 aa26.37■■□□□ 1.81
SCARB1-201ENST00000261693 ERICH6Q7L0X2 663 aa26.36■■□□□ 1.81
SCARB1-201ENST00000261693 KIAA1107Q9UPP5 1409 aa26.35■■□□□ 1.81
SCARB1-201ENST00000261693 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
SCARB1-201ENST00000261693 PLB1Q6P1J6 1458 aa26.35■■□□□ 1.81
SCARB1-201ENST00000261693 GPATCH8Q9UKJ3 1502 aaKnown RBP26.34■■□□□ 1.81
SCARB1-201ENST00000261693 MBD5Q9P267 1494 aa26.34■■□□□ 1.81
SCARB1-201ENST00000261693 KIF14Q15058 1648 aa26.33■■□□□ 1.81
SCARB1-201ENST00000261693 ADGBQ8N7X0 1667 aa26.32■■□□□ 1.8
SCARB1-201ENST00000261693 ITSN2Q9NZM3 1697 aa26.3■■□□□ 1.8
SCARB1-201ENST00000261693 BCL11AQ9H165 835 aa26.29■■□□□ 1.8
SCARB1-201ENST00000261693 FBLN2P98095 1184 aa26.28■■□□□ 1.8
SCARB1-201ENST00000261693 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
SCARB1-201ENST00000261693 SMG6Q86US8 1419 aaKnown RBP26.26■■□□□ 1.79
SCARB1-201ENST00000261693 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
SCARB1-201ENST00000261693 CHMP7Q8WUX9 453 aaPredicted RBP26.25■■□□□ 1.79
SCARB1-201ENST00000261693 KDM5CP41229 1560 aa26.25■■□□□ 1.79
SCARB1-201ENST00000261693 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
SCARB1-201ENST00000261693 CROCC2H7BZ55 1655 aa26.25■■□□□ 1.79
SCARB1-201ENST00000261693 ADGRL2O95490 1459 aa26.24■■□□□ 1.79
SCARB1-201ENST00000261693 NUDCQ9Y266 331 aa26.24■■□□□ 1.79
SCARB1-201ENST00000261693 KDM2AQ9Y2K7 1162 aa26.23■■□□□ 1.79
SCARB1-201ENST00000261693 CARD11Q9BXL7 1154 aa26.23■■□□□ 1.79
SCARB1-201ENST00000261693 NUP155O75694 1391 aa26.22■■□□□ 1.79
SCARB1-201ENST00000261693 TMC1Q8TDI8 760 aa26.2■■□□□ 1.78
SCARB1-201ENST00000261693 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
SCARB1-201ENST00000261693 PNISRQ8TF01 805 aaKnown RBP26.18■■□□□ 1.78
SCARB1-201ENST00000261693 ADCY10Q96PN6 1610 aa26.18■■□□□ 1.78
SCARB1-201ENST00000261693 ARID4BQ4LE39 1312 aaPredicted RBP26.16■■□□□ 1.78
SCARB1-201ENST00000261693 ST20-MTHFSA0A0A6YYL1 179 aa26.16■■□□□ 1.78
SCARB1-201ENST00000261693 CCDC136Q96JN2 1154 aa26.15■■□□□ 1.78
SCARB1-201ENST00000261693 PLEKHD1A6NEE1 506 aa26.14■■□□□ 1.78
SCARB1-201ENST00000261693 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
SCARB1-201ENST00000261693 RALGAPBQ86X10 1494 aa26.14■■□□□ 1.77
SCARB1-201ENST00000261693 C9orf84Q5VXU9 1444 aa26.13■■□□□ 1.77
SCARB1-201ENST00000261693 DCAF11Q8TEB1 546 aa26.13■■□□□ 1.77
SCARB1-201ENST00000261693 UHRF1BP1Q6BDS2 1440 aa26.12■■□□□ 1.77
SCARB1-201ENST00000261693 CDC42BPAQ5VT25 1732 aa26.12■■□□□ 1.77
SCARB1-201ENST00000261693 RNF123Q5XPI4 1314 aa26.11■■□□□ 1.77
SCARB1-201ENST00000261693 CARMIL2Q6F5E8 1435 aa26.11■■□□□ 1.77
SCARB1-201ENST00000261693 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
SCARB1-201ENST00000261693 TSPY4P0CV99 314 aa26.1■■□□□ 1.77
SCARB1-201ENST00000261693 TSPY10P0CW01 314 aa26.1■■□□□ 1.77
SCARB1-201ENST00000261693 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.775e-9■■■■□ 25.7
SCARB1-201ENST00000261693 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
SCARB1-201ENST00000261693 KIF15Q9NS87 1388 aa26.08■■□□□ 1.77
SCARB1-201ENST00000261693 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
SCARB1-201ENST00000261693 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
SCARB1-201ENST00000261693 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
SCARB1-201ENST00000261693 SALL2Q9Y467 1007 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-201ENST00000261693 ATP10BO94823 1461 aa26.02■■□□□ 1.76
SCARB1-201ENST00000261693 MYBBP1AQ9BQG0 1328 aaKnown RBP26.02■■□□□ 1.76
SCARB1-201ENST00000261693 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
SCARB1-201ENST00000261693 ERCC6Q03468 1493 aa26.01■■□□□ 1.75
SCARB1-201ENST00000261693 PAK3O75914 559 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms