RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
RORA-201ENST00000261523 ARHGAP35Q9NRY4 1499 aa10.25□□□□□ -0.77
RORA-201ENST00000261523 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
RORA-201ENST00000261523 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
RORA-201ENST00000261523 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
RORA-201ENST00000261523 CLSPNQ9HAW4 1339 aa10.23□□□□□ -0.77
RORA-201ENST00000261523 ADGRL1O94910 1474 aa10.22□□□□□ -0.77
RORA-201ENST00000261523 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
RORA-201ENST00000261523 KDM4FA0A1W2PPD8 638 aa10.21□□□□□ -0.78
RORA-201ENST00000261523 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.78
RORA-201ENST00000261523 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
RORA-201ENST00000261523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.2□□□□□ -0.78
RORA-201ENST00000261523 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
RORA-201ENST00000261523 FANCAO15360 1455 aa10.18□□□□□ -0.78
RORA-201ENST00000261523 CCDC18Q5T9S5 1454 aa10.18□□□□□ -0.78
RORA-201ENST00000261523 KIF14Q15058 1648 aa10.18□□□□□ -0.78
RORA-201ENST00000261523 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
RORA-201ENST00000261523 RICTORQ6R327 1708 aa10.17□□□□□ -0.78
RORA-201ENST00000261523 CASKIN1Q8WXD9 1431 aa10.17□□□□□ -0.78
RORA-201ENST00000261523 FRMPD1Q5SYB0 1578 aa10.16□□□□□ -0.78
RORA-201ENST00000261523 DENND4BO75064 1496 aaPredicted RBP10.16□□□□□ -0.78
RORA-201ENST00000261523 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
RORA-201ENST00000261523 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
RORA-201ENST00000261523 TROQ12816 1431 aaPredicted RBP10.15□□□□□ -0.78
RORA-201ENST00000261523 ZMYM4Q5VZL5 1548 aa10.15□□□□□ -0.78
RORA-201ENST00000261523 ARHGEF40Q8TER5 1519 aa10.15□□□□□ -0.78
RORA-201ENST00000261523 PCF11O94913 1555 aaKnown RBP10.15□□□□□ -0.78
RORA-201ENST00000261523 PLCH2O75038 1416 aa10.15□□□□□ -0.78
RORA-201ENST00000261523 LRRIQ1Q96JM4 1722 aa10.14□□□□□ -0.79
RORA-201ENST00000261523 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
RORA-201ENST00000261523 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
RORA-201ENST00000261523 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
RORA-201ENST00000261523 RAPGEF3O95398 923 aa10.12□□□□□ -0.79
RORA-201ENST00000261523 EFCAB2Q5VUJ9 269 aa10.11□□□□□ -0.79
RORA-201ENST00000261523 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
RORA-201ENST00000261523 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
RORA-201ENST00000261523 ADAMTSL3P82987 1691 aa10.1□□□□□ -0.79
RORA-201ENST00000261523 BCORL1Q5H9F3 1711 aa10.1□□□□□ -0.79
RORA-201ENST00000261523 PREX2Q70Z35 1606 aa10.1□□□□□ -0.79
RORA-201ENST00000261523 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
RORA-201ENST00000261523 MAP3K1Q13233 1512 aa10.09□□□□□ -0.79
RORA-201ENST00000261523 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
RORA-201ENST00000261523 ZNF518AQ6AHZ1 1483 aa10.09□□□□□ -0.79
RORA-201ENST00000261523 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
RORA-201ENST00000261523 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
RORA-201ENST00000261523 KDM5CP41229 1560 aa10.07□□□□□ -0.8
RORA-201ENST00000261523 RAB3GAP2Q9H2M9 1393 aa10.06□□□□□ -0.8
RORA-201ENST00000261523 CDC42BPAQ5VT25 1732 aa10.05□□□□□ -0.8
RORA-201ENST00000261523 ARID4BQ4LE39 1312 aaPredicted RBP10.05□□□□□ -0.8
RORA-201ENST00000261523 HECW2Q9P2P5 1572 aa10.05□□□□□ -0.8
RORA-201ENST00000261523 ITGAEP38570 1179 aa10.05□□□□□ -0.8
RORA-201ENST00000261523 PTPRMP28827 1452 aa10.04□□□□□ -0.8
RORA-201ENST00000261523 ABCC1P33527 1531 aa10.04□□□□□ -0.8
RORA-201ENST00000261523 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
RORA-201ENST00000261523 C9orf84Q5VXU9 1444 aa10.04□□□□□ -0.8
RORA-201ENST00000261523 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
RORA-201ENST00000261523 REREQ9P2R6 1566 aa10.03□□□□□ -0.8
RORA-201ENST00000261523 ATP10AO60312 1499 aa10.03□□□□□ -0.8
RORA-201ENST00000261523 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
RORA-201ENST00000261523 YEATS2Q9ULM3 1422 aa10.03□□□□□ -0.8
RORA-201ENST00000261523 EHBP1L1Q8N3D4 1523 aa10.02□□□□□ -0.8
RORA-201ENST00000261523 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.81
RORA-201ENST00000261523 SETD5Q9C0A6 1442 aa10.02□□□□□ -0.81
RORA-201ENST00000261523 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
RORA-201ENST00000261523 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
RORA-201ENST00000261523 RIMS1Q86UR5 1692 aaKnown RBP10.01□□□□□ -0.81
RORA-201ENST00000261523 SUPT16HQ9Y5B9 1047 aaKnown RBP10.01□□□□□ -0.81
RORA-201ENST00000261523 FER1L4A9Z1Z3 1794 aa10.01□□□□□ -0.81
RORA-201ENST00000261523 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
RORA-201ENST00000261523 GPATCH8Q9UKJ3 1502 aaKnown RBP10□□□□□ -0.81
RORA-201ENST00000261523 DIP2CQ9Y2E4 1556 aa9.99□□□□□ -0.81
RORA-201ENST00000261523 SIGLEC1Q9BZZ2 1709 aa9.99□□□□□ -0.81
RORA-201ENST00000261523 ARHGEF12Q9NZN5 1544 aa9.99□□□□□ -0.81
RORA-201ENST00000261523 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
RORA-201ENST00000261523 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
RORA-201ENST00000261523 SAMD9LQ8IVG5 1584 aa9.98□□□□□ -0.81
RORA-201ENST00000261523 AGLP35573 1532 aa9.98□□□□□ -0.81
RORA-201ENST00000261523 ABCA6Q8N139 1617 aa9.98□□□□□ -0.81
RORA-201ENST00000261523 SUPT6HQ7KZ85 1726 aaKnown RBP9.97□□□□□ -0.81
RORA-201ENST00000261523 AFAP1Q8N556 730 aa9.97□□□□□ -0.81
RORA-201ENST00000261523 KIDINS220Q9ULH0 1771 aa9.97□□□□□ -0.81
RORA-201ENST00000261523 TRAPPC8Q9Y2L5 1435 aa9.96□□□□□ -0.81
RORA-201ENST00000261523 SYCP2Q9BX26 1530 aa9.96□□□□□ -0.81
RORA-201ENST00000261523 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.81
RORA-201ENST00000261523 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
RORA-201ENST00000261523 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
RORA-201ENST00000261523 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
RORA-201ENST00000261523 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
RORA-201ENST00000261523 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
RORA-201ENST00000261523 LMTK3Q96Q04 1460 aa9.93□□□□□ -0.82
RORA-201ENST00000261523 SETD1BQ9UPS6 1966 aaKnown RBP9.93□□□□□ -0.82
RORA-201ENST00000261523 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
RORA-201ENST00000261523 SPAG9O60271 1321 aaKnown RBP9.93□□□□□ -0.82
RORA-201ENST00000261523 PREX1Q8TCU6 1659 aa9.93□□□□□ -0.82
RORA-201ENST00000261523 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
RORA-201ENST00000261523 ADGBQ8N7X0 1667 aa9.92□□□□□ -0.82
RORA-201ENST00000261523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.92□□□□□ -0.82
RORA-201ENST00000261523 NCOA2Q15596 1464 aa9.92□□□□□ -0.82
RORA-201ENST00000261523 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
RORA-201ENST00000261523 MLECQ14165 292 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms