RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
KLF3-201ENST00000261438 ARHGAP35Q9NRY4 1499 aa22.12■■□□□ 1.13
KLF3-201ENST00000261438 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
KLF3-201ENST00000261438 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
KLF3-201ENST00000261438 AMER1Q5JTC6 1135 aaPredicted RBP22.09■■□□□ 1.13
KLF3-201ENST00000261438 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
KLF3-201ENST00000261438 BRPF3Q9ULD4 1205 aa22.08■■□□□ 1.13
KLF3-201ENST00000261438 FOXD1Q16676 465 aa22.08■■□□□ 1.13
KLF3-201ENST00000261438 NFKBIBQ15653 356 aa22.08■■□□□ 1.12
KLF3-201ENST00000261438 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
KLF3-201ENST00000261438 PKNOX2Q96KN3 472 aa22.06■■□□□ 1.12
KLF3-201ENST00000261438 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
KLF3-201ENST00000261438 DCAF11Q8TEB1 546 aa22.05■■□□□ 1.12
KLF3-201ENST00000261438 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
KLF3-201ENST00000261438 TMF1P82094 1093 aa22.04■■□□□ 1.12
KLF3-201ENST00000261438 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
KLF3-201ENST00000261438 CENPQQ7L2Z9 268 aaPredicted RBP22.03■■□□□ 1.12
KLF3-201ENST00000261438 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
KLF3-201ENST00000261438 KIAA2012Q0VF49 1180 aa22.01■■□□□ 1.11
KLF3-201ENST00000261438 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
KLF3-201ENST00000261438 CHMP4BQ9H444 224 aaKnown RBP22.01■■□□□ 1.11
KLF3-201ENST00000261438 MFAP1P55081 439 aaKnown RBP21.99■■□□□ 1.11
KLF3-201ENST00000261438 NLRP13Q86W25 1043 aa21.99■■□□□ 1.11
KLF3-201ENST00000261438 PLIN1O60240 522 aa21.98■■□□□ 1.11
KLF3-201ENST00000261438 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
KLF3-201ENST00000261438 DDX11L8A8MPP1 907 aa21.97■■□□□ 1.11
KLF3-201ENST00000261438 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
KLF3-201ENST00000261438 MAPK8IP3Q9UPT6 1336 aa21.96■■□□□ 1.11
KLF3-201ENST00000261438 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
KLF3-201ENST00000261438 ZRSR1Q15695 479 aaKnown RBP21.95■■□□□ 1.1
KLF3-201ENST00000261438 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
KLF3-201ENST00000261438 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
KLF3-201ENST00000261438 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
KLF3-201ENST00000261438 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
KLF3-201ENST00000261438 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
KLF3-201ENST00000261438 FAM43AQ8N2R8 423 aa21.91■■□□□ 1.1
KLF3-201ENST00000261438 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
KLF3-201ENST00000261438 MYBBP1AQ9BQG0 1328 aaKnown RBP21.9■■□□□ 1.1
KLF3-201ENST00000261438 PKD2Q13563 968 aa21.88■■□□□ 1.09
KLF3-201ENST00000261438 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
KLF3-201ENST00000261438 KIF15Q9NS87 1388 aa21.87■■□□□ 1.09
KLF3-201ENST00000261438 GOLGA6L6A8MZA4 724 aa21.87■■□□□ 1.09
KLF3-201ENST00000261438 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
KLF3-201ENST00000261438 NACADO15069 1562 aa21.86■■□□□ 1.09
KLF3-201ENST00000261438 DRC7Q8IY82 874 aa21.85■■□□□ 1.09
KLF3-201ENST00000261438 SKOR2Q2VWA4 1001 aaPredicted RBP21.84■■□□□ 1.09
KLF3-201ENST00000261438 FOXD4L1Q9NU39 408 aa21.84■■□□□ 1.09
KLF3-201ENST00000261438 FAM13BQ9NYF5 915 aa21.83■■□□□ 1.09
KLF3-201ENST00000261438 NRDCO43847 1150 aa21.83■■□□□ 1.09
KLF3-201ENST00000261438 SYAP1Q96A49 352 aaPredicted RBP21.83■■□□□ 1.09
KLF3-201ENST00000261438 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.09
KLF3-201ENST00000261438 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
KLF3-201ENST00000261438 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
KLF3-201ENST00000261438 GOLGA6L4A6NEF3 574 aa21.81■■□□□ 1.08
KLF3-201ENST00000261438 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
KLF3-201ENST00000261438 CUX2O14529 1486 aa21.81■■□□□ 1.08
KLF3-201ENST00000261438 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
KLF3-201ENST00000261438 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
KLF3-201ENST00000261438 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
KLF3-201ENST00000261438 MCCP23508 829 aa21.79■■□□□ 1.08
KLF3-201ENST00000261438 WIZO95785 1651 aa21.79■■□□□ 1.08
KLF3-201ENST00000261438 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
KLF3-201ENST00000261438 CLUAP1Q96AJ1 413 aa21.77■■□□□ 1.08
KLF3-201ENST00000261438 CHMP5Q9NZZ3 219 aa21.77■■□□□ 1.08
KLF3-201ENST00000261438 CNTLNQ9NXG0 1405 aa21.77■■□□□ 1.08
KLF3-201ENST00000261438 TNNT3P45378 269 aaPredicted RBP21.76■■□□□ 1.07
KLF3-201ENST00000261438 MORC1Q86VD1 984 aa21.76■■□□□ 1.07
KLF3-201ENST00000261438 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.76■■□□□ 1.07
KLF3-201ENST00000261438 BACH2Q9BYV9 841 aa21.76■■□□□ 1.07
KLF3-201ENST00000261438 CCDC7Q96M83 1385 aa21.75■■□□□ 1.07
KLF3-201ENST00000261438 MRE11P49959 708 aa21.75■■□□□ 1.07
KLF3-201ENST00000261438 CCDC146Q8IYE0 955 aa21.74■■□□□ 1.07
KLF3-201ENST00000261438 WASHC2AQ641Q2 1341 aa21.74■■□□□ 1.07
KLF3-201ENST00000261438 UBE2Q2Q8WVN8 375 aa21.72■■□□□ 1.07
KLF3-201ENST00000261438 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
KLF3-201ENST00000261438 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
KLF3-201ENST00000261438 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
KLF3-201ENST00000261438 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
KLF3-201ENST00000261438 AKNAQ7Z591 1439 aa21.69■■□□□ 1.06
KLF3-201ENST00000261438 TPM2P07951 284 aa21.68■■□□□ 1.06
KLF3-201ENST00000261438 KIF7Q2M1P5 1343 aa21.68■■□□□ 1.06
KLF3-201ENST00000261438 MAP7D2Q96T17 732 aa21.67■■□□□ 1.06
KLF3-201ENST00000261438 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
KLF3-201ENST00000261438 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
KLF3-201ENST00000261438 COG6Q9Y2V7 657 aa21.66■■□□□ 1.06
KLF3-201ENST00000261438 A0A0U1RQG5 324 aaPredicted RBP21.66■■□□□ 1.06
KLF3-201ENST00000261438 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
KLF3-201ENST00000261438 USP47Q96K76 1375 aa21.65■■□□□ 1.06
KLF3-201ENST00000261438 RRP9O43818 475 aaKnown RBP21.65■■□□□ 1.06
KLF3-201ENST00000261438 KCNJ4P48050 445 aa21.65■■□□□ 1.06
KLF3-201ENST00000261438 APBB1O00213 710 aa21.64■■□□□ 1.06
KLF3-201ENST00000261438 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.06
KLF3-201ENST00000261438 PHF14O94880 888 aa21.64■■□□□ 1.05
KLF3-201ENST00000261438 NUP155O75694 1391 aa21.62■■□□□ 1.05
KLF3-201ENST00000261438 TRAK2O60296 914 aa21.62■■□□□ 1.05
KLF3-201ENST00000261438 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
KLF3-201ENST00000261438 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
KLF3-201ENST00000261438 R3HCC1Q9Y3T6 440 aaKnown RBP21.62■■□□□ 1.05
KLF3-201ENST00000261438 PODXL2Q9NZ53 605 aa21.61■■□□□ 1.05
KLF3-201ENST00000261438 E9PSI1 815 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms