RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 HSPA5P11021 654 aaKnown RBP18.94■□□□□ 0.62
C12orf49-201ENST00000261318 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
C12orf49-201ENST00000261318 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
C12orf49-201ENST00000261318 IPO9Q96P70 1041 aaKnown RBP18.91■□□□□ 0.62
C12orf49-201ENST00000261318 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
C12orf49-201ENST00000261318 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.9■□□□□ 0.62
C12orf49-201ENST00000261318 TULP1O00294 542 aaPredicted RBP18.89■□□□□ 0.62
C12orf49-201ENST00000261318 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
C12orf49-201ENST00000261318 SLKQ9H2G2 1235 aaPredicted RBP18.89■□□□□ 0.61
C12orf49-201ENST00000261318 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
C12orf49-201ENST00000261318 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
C12orf49-201ENST00000261318 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
C12orf49-201ENST00000261318 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
C12orf49-201ENST00000261318 SOGA1O94964 1423 aa18.85■□□□□ 0.61
C12orf49-201ENST00000261318 RALBP1Q15311 655 aa18.85■□□□□ 0.61
C12orf49-201ENST00000261318 GOLGA6L3A6NEY3 463 aa18.84■□□□□ 0.61
C12orf49-201ENST00000261318 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
C12orf49-201ENST00000261318 KANK1Q14678 1352 aa18.84■□□□□ 0.61
C12orf49-201ENST00000261318 SYAP1Q96A49 352 aaPredicted RBP18.83■□□□□ 0.61
C12orf49-201ENST00000261318 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
C12orf49-201ENST00000261318 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
C12orf49-201ENST00000261318 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
C12orf49-201ENST00000261318 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
C12orf49-201ENST00000261318 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
C12orf49-201ENST00000261318 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
C12orf49-201ENST00000261318 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
C12orf49-201ENST00000261318 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
C12orf49-201ENST00000261318 ARID3AQ99856 593 aa18.78■□□□□ 0.6
C12orf49-201ENST00000261318 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
C12orf49-201ENST00000261318 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
C12orf49-201ENST00000261318 GNL2Q13823 731 aaKnown RBP18.76■□□□□ 0.59
C12orf49-201ENST00000261318 CUX2O14529 1486 aa18.75■□□□□ 0.59
C12orf49-201ENST00000261318 APBB1O00213 710 aa18.75■□□□□ 0.59
C12orf49-201ENST00000261318 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
C12orf49-201ENST00000261318 USP35Q9P2H5 1018 aa18.75■□□□□ 0.59
C12orf49-201ENST00000261318 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
C12orf49-201ENST00000261318 FOXD1Q16676 465 aa18.74■□□□□ 0.59
C12orf49-201ENST00000261318 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
C12orf49-201ENST00000261318 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
C12orf49-201ENST00000261318 PKD2Q13563 968 aa18.73■□□□□ 0.59
C12orf49-201ENST00000261318 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
C12orf49-201ENST00000261318 NPHP1O15259 732 aa18.71■□□□□ 0.59
C12orf49-201ENST00000261318 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
C12orf49-201ENST00000261318 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
C12orf49-201ENST00000261318 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
C12orf49-201ENST00000261318 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.58
C12orf49-201ENST00000261318 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
C12orf49-201ENST00000261318 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
C12orf49-201ENST00000261318 PHF14O94880 888 aa18.67■□□□□ 0.58
C12orf49-201ENST00000261318 TPM4P67936 248 aa18.66■□□□□ 0.58
C12orf49-201ENST00000261318 SOX12O15370 315 aa18.66■□□□□ 0.58
C12orf49-201ENST00000261318 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
C12orf49-201ENST00000261318 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
C12orf49-201ENST00000261318 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
C12orf49-201ENST00000261318 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
C12orf49-201ENST00000261318 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
C12orf49-201ENST00000261318 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
C12orf49-201ENST00000261318 TNNT3P45378 269 aaPredicted RBP18.65■□□□□ 0.58
C12orf49-201ENST00000261318 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
C12orf49-201ENST00000261318 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
C12orf49-201ENST00000261318 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
C12orf49-201ENST00000261318 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
C12orf49-201ENST00000261318 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
C12orf49-201ENST00000261318 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
C12orf49-201ENST00000261318 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
C12orf49-201ENST00000261318 HDGFP51858 240 aaKnown RBP18.61■□□□□ 0.57
C12orf49-201ENST00000261318 GSE1Q14687 1217 aa18.61■□□□□ 0.57
C12orf49-201ENST00000261318 TRIM6-TRIM34B2RNG4 842 aa18.6■□□□□ 0.57
C12orf49-201ENST00000261318 GPATCH3Q96I76 525 aa18.6■□□□□ 0.57
C12orf49-201ENST00000261318 NUP155O75694 1391 aa18.6■□□□□ 0.57
C12orf49-201ENST00000261318 ST18O60284 1047 aa18.59■□□□□ 0.57
C12orf49-201ENST00000261318 KIF15Q9NS87 1388 aa18.59■□□□□ 0.57
C12orf49-201ENST00000261318 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
C12orf49-201ENST00000261318 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
C12orf49-201ENST00000261318 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
C12orf49-201ENST00000261318 NOC3LQ8WTT2 800 aaKnown RBP18.59■□□□□ 0.57
C12orf49-201ENST00000261318 HMMRO75330 724 aa18.58■□□□□ 0.57
C12orf49-201ENST00000261318 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
C12orf49-201ENST00000261318 STK26Q9P289 416 aa18.57■□□□□ 0.56
C12orf49-201ENST00000261318 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
C12orf49-201ENST00000261318 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 PDE4AP27815 886 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 CLSTN1O94985 981 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
C12orf49-201ENST00000261318 SPAG9O60271 1321 aaKnown RBP18.55■□□□□ 0.56
C12orf49-201ENST00000261318 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
C12orf49-201ENST00000261318 CCDC34Q96HJ3 373 aa18.55■□□□□ 0.56
C12orf49-201ENST00000261318 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
C12orf49-201ENST00000261318 STK31Q9BXU1 1019 aa18.54■□□□□ 0.56
C12orf49-201ENST00000261318 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
C12orf49-201ENST00000261318 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
C12orf49-201ENST00000261318 CHMP4AQ9BY43 222 aa18.53■□□□□ 0.56
C12orf49-201ENST00000261318 WIZO95785 1651 aa18.53■□□□□ 0.56
C12orf49-201ENST00000261318 SKOR2Q2VWA4 1001 aaPredicted RBP18.52■□□□□ 0.56
C12orf49-201ENST00000261318 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
C12orf49-201ENST00000261318 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
C12orf49-201ENST00000261318 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
C12orf49-201ENST00000261318 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 993.4 ms