RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.83
MSI1-201ENST00000257552 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
MSI1-201ENST00000257552 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
MSI1-201ENST00000257552 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
MSI1-201ENST00000257552 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
MSI1-201ENST00000257552 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
MSI1-201ENST00000257552 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
MSI1-201ENST00000257552 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
MSI1-201ENST00000257552 NOP58Q9Y2X3 529 aaKnown RBP20.22■□□□□ 0.83
MSI1-201ENST00000257552 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
MSI1-201ENST00000257552 KIAA0556O60303 1618 aa20.22■□□□□ 0.83
MSI1-201ENST00000257552 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
MSI1-201ENST00000257552 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
MSI1-201ENST00000257552 NAIPQ13075 1403 aa20.21■□□□□ 0.83
MSI1-201ENST00000257552 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
MSI1-201ENST00000257552 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
MSI1-201ENST00000257552 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
MSI1-201ENST00000257552 FOXD1Q16676 465 aa20.19■□□□□ 0.82
MSI1-201ENST00000257552 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
MSI1-201ENST00000257552 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
MSI1-201ENST00000257552 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
MSI1-201ENST00000257552 PRKCSHP14314 528 aaPredicted RBP20.15■□□□□ 0.82
MSI1-201ENST00000257552 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
MSI1-201ENST00000257552 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
MSI1-201ENST00000257552 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
MSI1-201ENST00000257552 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
MSI1-201ENST00000257552 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
MSI1-201ENST00000257552 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
MSI1-201ENST00000257552 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
MSI1-201ENST00000257552 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
MSI1-201ENST00000257552 RAPGEF6Q8TEU7 1601 aa20.1■□□□□ 0.81
MSI1-201ENST00000257552 NUP160Q12769 1436 aa20.07■□□□□ 0.8
MSI1-201ENST00000257552 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
MSI1-201ENST00000257552 ANO8Q9HCE9 1232 aaPredicted RBP20.06■□□□□ 0.8
MSI1-201ENST00000257552 KDM6BO15054 1643 aa20.05■□□□□ 0.8
MSI1-201ENST00000257552 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
MSI1-201ENST00000257552 MIA2Q96PC5 1412 aa20.04■□□□□ 0.8
MSI1-201ENST00000257552 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
MSI1-201ENST00000257552 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
MSI1-201ENST00000257552 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
MSI1-201ENST00000257552 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
MSI1-201ENST00000257552 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
MSI1-201ENST00000257552 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
MSI1-201ENST00000257552 TROQ12816 1431 aaPredicted RBP20.01■□□□□ 0.79
MSI1-201ENST00000257552 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
MSI1-201ENST00000257552 ZBTB47Q9UFB7 747 aaPredicted RBP20.01■□□□□ 0.79
MSI1-201ENST00000257552 DAPK1P53355 1430 aa20.01■□□□□ 0.79
MSI1-201ENST00000257552 ABCC5O15440 1437 aa20■□□□□ 0.79
MSI1-201ENST00000257552 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
MSI1-201ENST00000257552 L3MBTL2Q969R5 705 aa19.99■□□□□ 0.79
MSI1-201ENST00000257552 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
MSI1-201ENST00000257552 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
MSI1-201ENST00000257552 KIF14Q15058 1648 aa19.97■□□□□ 0.79
MSI1-201ENST00000257552 PTPRGP23470 1445 aa19.97■□□□□ 0.79
MSI1-201ENST00000257552 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
MSI1-201ENST00000257552 RTN4Q9NQC3 1192 aaKnown RBP19.96■□□□□ 0.79
MSI1-201ENST00000257552 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
MSI1-201ENST00000257552 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
MSI1-201ENST00000257552 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
MSI1-201ENST00000257552 ATP10BO94823 1461 aa19.94■□□□□ 0.78
MSI1-201ENST00000257552 IL27Q8NEV9 243 aa19.94■□□□□ 0.78
MSI1-201ENST00000257552 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
MSI1-201ENST00000257552 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
MSI1-201ENST00000257552 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
MSI1-201ENST00000257552 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
MSI1-201ENST00000257552 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
MSI1-201ENST00000257552 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
MSI1-201ENST00000257552 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
MSI1-201ENST00000257552 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
MSI1-201ENST00000257552 LAS1LQ9Y4W2 734 aaKnown RBP19.87■□□□□ 0.77
MSI1-201ENST00000257552 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
MSI1-201ENST00000257552 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
MSI1-201ENST00000257552 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
MSI1-201ENST00000257552 ROCK1Q13464 1354 aa19.84■□□□□ 0.77
MSI1-201ENST00000257552 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
MSI1-201ENST00000257552 ABCA8O94911 1581 aa19.83■□□□□ 0.77
MSI1-201ENST00000257552 CHD1O14646 1710 aa19.83■□□□□ 0.76
MSI1-201ENST00000257552 TSPY4P0CV99 314 aa19.83■□□□□ 0.76
MSI1-201ENST00000257552 TSPY10P0CW01 314 aa19.83■□□□□ 0.76
MSI1-201ENST00000257552 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
MSI1-201ENST00000257552 PKD2Q13563 968 aa19.8■□□□□ 0.76
MSI1-201ENST00000257552 NEFMP07197 916 aa19.79■□□□□ 0.76
MSI1-201ENST00000257552 ANKRD30BQ9BXX2 1392 aa19.77■□□□□ 0.76
MSI1-201ENST00000257552 ANKRD30AQ9BXX3 1397 aa19.77■□□□□ 0.76
MSI1-201ENST00000257552 RNF123Q5XPI4 1314 aa19.77■□□□□ 0.75
MSI1-201ENST00000257552 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.77■□□□□ 0.75
MSI1-201ENST00000257552 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
MSI1-201ENST00000257552 ANKRD50Q9ULJ7 1429 aa19.74■□□□□ 0.75
MSI1-201ENST00000257552 NUP155O75694 1391 aa19.74■□□□□ 0.75
MSI1-201ENST00000257552 C9orf84Q5VXU9 1444 aa19.73■□□□□ 0.75
MSI1-201ENST00000257552 TMC1Q8TDI8 760 aa19.73■□□□□ 0.75
MSI1-201ENST00000257552 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
MSI1-201ENST00000257552 EXOC6Q8TAG9 804 aa19.73■□□□□ 0.75
MSI1-201ENST00000257552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
MSI1-201ENST00000257552 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
MSI1-201ENST00000257552 PDE4AP27815 886 aa19.7■□□□□ 0.74
MSI1-201ENST00000257552 PZPP20742 1482 aa19.7■□□□□ 0.74
MSI1-201ENST00000257552 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
MSI1-201ENST00000257552 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
MSI1-201ENST00000257552 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms