RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
PUM1-201ENST00000257075 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
PUM1-201ENST00000257075 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
PUM1-201ENST00000257075 MS4A1P11836 297 aa13.77□□□□□ -0.21
PUM1-201ENST00000257075 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.21
PUM1-201ENST00000257075 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
PUM1-201ENST00000257075 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
PUM1-201ENST00000257075 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
PUM1-201ENST00000257075 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
PUM1-201ENST00000257075 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
PUM1-201ENST00000257075 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
PUM1-201ENST00000257075 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
PUM1-201ENST00000257075 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
PUM1-201ENST00000257075 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
PUM1-201ENST00000257075 EVA1CP58658 441 aa13.73□□□□□ -0.21
PUM1-201ENST00000257075 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
PUM1-201ENST00000257075 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
PUM1-201ENST00000257075 AMPHP49418 695 aa13.72□□□□□ -0.21
PUM1-201ENST00000257075 FGD1P98174 961 aa13.72□□□□□ -0.21
PUM1-201ENST00000257075 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
PUM1-201ENST00000257075 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
PUM1-201ENST00000257075 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
PUM1-201ENST00000257075 G3V3G9 751 aa13.71□□□□□ -0.22
PUM1-201ENST00000257075 FOXD1Q16676 465 aa13.71□□□□□ -0.22
PUM1-201ENST00000257075 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.22
PUM1-201ENST00000257075 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
PUM1-201ENST00000257075 KCNJ4P48050 445 aa13.7□□□□□ -0.22
PUM1-201ENST00000257075 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
PUM1-201ENST00000257075 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
PUM1-201ENST00000257075 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
PUM1-201ENST00000257075 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
PUM1-201ENST00000257075 ROCK2O75116 1388 aaKnown RBP13.69□□□□□ -0.22
PUM1-201ENST00000257075 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
PUM1-201ENST00000257075 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
PUM1-201ENST00000257075 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
PUM1-201ENST00000257075 MSH5O43196 834 aa13.68□□□□□ -0.22
PUM1-201ENST00000257075 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
PUM1-201ENST00000257075 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
PUM1-201ENST00000257075 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
PUM1-201ENST00000257075 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.222e-8■□□□□ 9.5
PUM1-201ENST00000257075 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
PUM1-201ENST00000257075 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
PUM1-201ENST00000257075 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
PUM1-201ENST00000257075 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
PUM1-201ENST00000257075 ATF3P18847 181 aa13.65□□□□□ -0.22
PUM1-201ENST00000257075 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
PUM1-201ENST00000257075 BECN1Q14457 450 aa13.64□□□□□ -0.23
PUM1-201ENST00000257075 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
PUM1-201ENST00000257075 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
PUM1-201ENST00000257075 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■□□□□ 10.7
PUM1-201ENST00000257075 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
PUM1-201ENST00000257075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■□□□ 13.8
PUM1-201ENST00000257075 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
PUM1-201ENST00000257075 WIZO95785 1651 aa13.61□□□□□ -0.23
PUM1-201ENST00000257075 MIER1Q8N108 512 aa13.61□□□□□ -0.23
PUM1-201ENST00000257075 PSME1Q06323 249 aa13.6□□□□□ -0.23
PUM1-201ENST00000257075 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
PUM1-201ENST00000257075 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
PUM1-201ENST00000257075 UACAQ9BZF9 1416 aa13.6□□□□□ -0.23
PUM1-201ENST00000257075 KTN1Q86UP2 1357 aaKnown RBP13.6□□□□□ -0.23
PUM1-201ENST00000257075 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
PUM1-201ENST00000257075 GORABQ5T7V8 394 aa13.59□□□□□ -0.23
PUM1-201ENST00000257075 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
PUM1-201ENST00000257075 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
PUM1-201ENST00000257075 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
PUM1-201ENST00000257075 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.247e-7■■■■■ 33.4
PUM1-201ENST00000257075 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
PUM1-201ENST00000257075 COG3Q96JB2 828 aa13.56□□□□□ -0.24
PUM1-201ENST00000257075 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
PUM1-201ENST00000257075 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
PUM1-201ENST00000257075 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
PUM1-201ENST00000257075 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
PUM1-201ENST00000257075 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
PUM1-201ENST00000257075 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
PUM1-201ENST00000257075 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
PUM1-201ENST00000257075 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.24
PUM1-201ENST00000257075 EVC2Q86UK5 1308 aa13.52□□□□□ -0.24
PUM1-201ENST00000257075 CLSTN1O94985 981 aa13.52□□□□□ -0.24
PUM1-201ENST00000257075 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
PUM1-201ENST00000257075 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
PUM1-201ENST00000257075 RGS3P49796 1198 aa13.51□□□□□ -0.25
PUM1-201ENST00000257075 TPRNQ4KMQ1 711 aa13.5□□□□□ -0.25
PUM1-201ENST00000257075 MCCP23508 829 aa13.5□□□□□ -0.25
PUM1-201ENST00000257075 APBB1O00213 710 aa13.5□□□□□ -0.25
PUM1-201ENST00000257075 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
PUM1-201ENST00000257075 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
PUM1-201ENST00000257075 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
PUM1-201ENST00000257075 RALBP1Q15311 655 aa13.49□□□□□ -0.25
PUM1-201ENST00000257075 TEFQ10587 303 aa13.49□□□□□ -0.25
PUM1-201ENST00000257075 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
PUM1-201ENST00000257075 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
PUM1-201ENST00000257075 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
PUM1-201ENST00000257075 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
PUM1-201ENST00000257075 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
PUM1-201ENST00000257075 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
PUM1-201ENST00000257075 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
PUM1-201ENST00000257075 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
PUM1-201ENST00000257075 PRG4Q92954 1404 aaPredicted RBP13.46□□□□□ -0.25
PUM1-201ENST00000257075 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.26
PUM1-201ENST00000257075 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms