RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
NIP7-202ENST00000254941 WDR7Q9Y4E6 1490 aa14.22□□□□□ -0.13
NIP7-202ENST00000254941 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.13
NIP7-202ENST00000254941 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.13
NIP7-202ENST00000254941 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
NIP7-202ENST00000254941 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
NIP7-202ENST00000254941 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
NIP7-202ENST00000254941 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
NIP7-202ENST00000254941 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
NIP7-202ENST00000254941 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
NIP7-202ENST00000254941 ZNF644Q9H582 1327 aaPredicted RBP14.17□□□□□ -0.14
NIP7-202ENST00000254941 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
NIP7-202ENST00000254941 HRCP23327 699 aa14.16□□□□□ -0.14
NIP7-202ENST00000254941 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.14
NIP7-202ENST00000254941 DAPK1P53355 1430 aa14.15□□□□□ -0.14
NIP7-202ENST00000254941 SETD5Q9C0A6 1442 aa14.14□□□□□ -0.15
NIP7-202ENST00000254941 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
NIP7-202ENST00000254941 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
NIP7-202ENST00000254941 ABCC5O15440 1437 aa14.13□□□□□ -0.15
NIP7-202ENST00000254941 PLCH2O75038 1416 aa14.13□□□□□ -0.15
NIP7-202ENST00000254941 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
NIP7-202ENST00000254941 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
NIP7-202ENST00000254941 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
NIP7-202ENST00000254941 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
NIP7-202ENST00000254941 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
NIP7-202ENST00000254941 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
NIP7-202ENST00000254941 CCER1Q8TC90 406 aaPredicted RBP14.12□□□□□ -0.15
NIP7-202ENST00000254941 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
NIP7-202ENST00000254941 ARHGEF5Q12774 1597 aa14.11□□□□□ -0.15
NIP7-202ENST00000254941 GCC2Q8IWJ2 1684 aa14.1□□□□□ -0.15
NIP7-202ENST00000254941 ADGBQ8N7X0 1667 aa14.09□□□□□ -0.15
NIP7-202ENST00000254941 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
NIP7-202ENST00000254941 NAIPQ13075 1403 aa14.09□□□□□ -0.15
NIP7-202ENST00000254941 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
NIP7-202ENST00000254941 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
NIP7-202ENST00000254941 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
NIP7-202ENST00000254941 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
NIP7-202ENST00000254941 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
NIP7-202ENST00000254941 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
NIP7-202ENST00000254941 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
NIP7-202ENST00000254941 ZEB1P37275 1124 aaPredicted RBP14.06□□□□□ -0.16
NIP7-202ENST00000254941 RSPH4AQ5TD94 716 aa14.06□□□□□ -0.16
NIP7-202ENST00000254941 ADGRL2O95490 1459 aa14.05□□□□□ -0.16
NIP7-202ENST00000254941 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
NIP7-202ENST00000254941 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
NIP7-202ENST00000254941 ABCC1P33527 1531 aa14.05□□□□□ -0.16
NIP7-202ENST00000254941 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
NIP7-202ENST00000254941 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
NIP7-202ENST00000254941 FANCAO15360 1455 aa14.04□□□□□ -0.16
NIP7-202ENST00000254941 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
NIP7-202ENST00000254941 ARHGEF12Q9NZN5 1544 aa14.03□□□□□ -0.16
NIP7-202ENST00000254941 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.16
NIP7-202ENST00000254941 CD109Q6YHK3 1445 aa14.02□□□□□ -0.17
NIP7-202ENST00000254941 GLI2P10070 1586 aa14.02□□□□□ -0.17
NIP7-202ENST00000254941 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.17
NIP7-202ENST00000254941 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
NIP7-202ENST00000254941 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
NIP7-202ENST00000254941 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
NIP7-202ENST00000254941 KDM6BO15054 1643 aa14.01□□□□□ -0.17
NIP7-202ENST00000254941 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
NIP7-202ENST00000254941 CFAP74Q9C0B2 1584 aa14□□□□□ -0.17
NIP7-202ENST00000254941 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
NIP7-202ENST00000254941 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
NIP7-202ENST00000254941 ACIN1Q9UKV3 1341 aaKnown RBP13.97□□□□□ -0.17
NIP7-202ENST00000254941 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
NIP7-202ENST00000254941 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
NIP7-202ENST00000254941 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.17
NIP7-202ENST00000254941 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
NIP7-202ENST00000254941 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
NIP7-202ENST00000254941 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
NIP7-202ENST00000254941 NEO1Q92859 1461 aa13.94□□□□□ -0.18
NIP7-202ENST00000254941 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
NIP7-202ENST00000254941 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
NIP7-202ENST00000254941 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
NIP7-202ENST00000254941 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
NIP7-202ENST00000254941 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
NIP7-202ENST00000254941 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
NIP7-202ENST00000254941 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
NIP7-202ENST00000254941 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
NIP7-202ENST00000254941 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
NIP7-202ENST00000254941 PPRC1Q5VV67 1664 aaKnown RBP13.9□□□□□ -0.18
NIP7-202ENST00000254941 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
NIP7-202ENST00000254941 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
NIP7-202ENST00000254941 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
NIP7-202ENST00000254941 KDM5CP41229 1560 aa13.88□□□□□ -0.19
NIP7-202ENST00000254941 POGZQ7Z3K3 1410 aa13.88□□□□□ -0.19
NIP7-202ENST00000254941 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
NIP7-202ENST00000254941 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
NIP7-202ENST00000254941 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
NIP7-202ENST00000254941 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
NIP7-202ENST00000254941 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
NIP7-202ENST00000254941 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
NIP7-202ENST00000254941 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
NIP7-202ENST00000254941 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
NIP7-202ENST00000254941 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
NIP7-202ENST00000254941 PZPP20742 1482 aa13.84□□□□□ -0.19
NIP7-202ENST00000254941 UNC13BO14795 1591 aa13.84□□□□□ -0.19
NIP7-202ENST00000254941 MLH3Q9UHC1 1453 aa13.84□□□□□ -0.19
NIP7-202ENST00000254941 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.19
NIP7-202ENST00000254941 SLC4A1APQ9BWU0 796 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms