RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 CLIP1P30622 1438 aa14.39□□□□□ -0.11
LAMA5-201ENST00000252999 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
LAMA5-201ENST00000252999 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
LAMA5-201ENST00000252999 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
LAMA5-201ENST00000252999 POGKQ9P215 609 aa14.36□□□□□ -0.11
LAMA5-201ENST00000252999 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
LAMA5-201ENST00000252999 USP35Q9P2H5 1018 aa14.35□□□□□ -0.11
LAMA5-201ENST00000252999 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
LAMA5-201ENST00000252999 TPM3P06753 285 aa14.34□□□□□ -0.11
LAMA5-201ENST00000252999 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
LAMA5-201ENST00000252999 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
LAMA5-201ENST00000252999 SOX12O15370 315 aa14.33□□□□□ -0.12
LAMA5-201ENST00000252999 RASSF8Q8NHQ8 419 aa14.32□□□□□ -0.12
LAMA5-201ENST00000252999 ZNF771Q7L3S4 317 aaPredicted RBP14.32□□□□□ -0.12
LAMA5-201ENST00000252999 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
LAMA5-201ENST00000252999 RSPH6AQ9H0K4 717 aa14.32□□□□□ -0.12
LAMA5-201ENST00000252999 PHF14O94880 888 aa14.31□□□□□ -0.12
LAMA5-201ENST00000252999 KCNH8Q96L42 1107 aa14.31□□□□□ -0.12
LAMA5-201ENST00000252999 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
LAMA5-201ENST00000252999 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
LAMA5-201ENST00000252999 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
LAMA5-201ENST00000252999 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
LAMA5-201ENST00000252999 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
LAMA5-201ENST00000252999 ITPRIPQ8IWB1 547 aa14.3□□□□□ -0.12
LAMA5-201ENST00000252999 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
LAMA5-201ENST00000252999 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
LAMA5-201ENST00000252999 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
LAMA5-201ENST00000252999 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
LAMA5-201ENST00000252999 TRIM6-TRIM34B2RNG4 842 aa14.26□□□□□ -0.13
LAMA5-201ENST00000252999 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
LAMA5-201ENST00000252999 GPATCH3Q96I76 525 aa14.25□□□□□ -0.13
LAMA5-201ENST00000252999 IPO8O15397 1037 aaKnown RBP14.25□□□□□ -0.13
LAMA5-201ENST00000252999 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
LAMA5-201ENST00000252999 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
LAMA5-201ENST00000252999 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
LAMA5-201ENST00000252999 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
LAMA5-201ENST00000252999 RWDD1Q9H446 243 aaPredicted RBP14.23□□□□□ -0.13
LAMA5-201ENST00000252999 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
LAMA5-201ENST00000252999 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
LAMA5-201ENST00000252999 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
LAMA5-201ENST00000252999 ZNF592Q92610 1267 aa14.22□□□□□ -0.13
LAMA5-201ENST00000252999 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
LAMA5-201ENST00000252999 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
LAMA5-201ENST00000252999 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
LAMA5-201ENST00000252999 TAF7LQ5H9L4 462 aa14.21□□□□□ -0.14
LAMA5-201ENST00000252999 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.14
LAMA5-201ENST00000252999 TPD52L1Q16890 204 aaPredicted RBP14.2□□□□□ -0.14
LAMA5-201ENST00000252999 GPS2Q13227 327 aa14.2□□□□□ -0.14
LAMA5-201ENST00000252999 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
LAMA5-201ENST00000252999 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
LAMA5-201ENST00000252999 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
LAMA5-201ENST00000252999 KIF16BQ96L93 1317 aa14.2□□□□□ -0.14
LAMA5-201ENST00000252999 CCDC70Q6NSX1 233 aa14.2□□□□□ -0.14
LAMA5-201ENST00000252999 DDX11L8A8MPP1 907 aa14.19□□□□□ -0.14
LAMA5-201ENST00000252999 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
LAMA5-201ENST00000252999 TMF1P82094 1093 aa14.18□□□□□ -0.14
LAMA5-201ENST00000252999 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
LAMA5-201ENST00000252999 SRPK2P78362 688 aaKnown RBP14.18□□□□□ -0.14
LAMA5-201ENST00000252999 SF3A1Q15459 793 aaKnown RBP14.18□□□□□ -0.14
LAMA5-201ENST00000252999 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
LAMA5-201ENST00000252999 FOXD4L6Q3SYB3 417 aaPredicted RBP14.18□□□□□ -0.14
LAMA5-201ENST00000252999 FOXD4L3Q6VB84 417 aaPredicted RBP14.18□□□□□ -0.14
LAMA5-201ENST00000252999 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
LAMA5-201ENST00000252999 KTN1Q86UP2 1357 aaKnown RBP14.17□□□□□ -0.14
LAMA5-201ENST00000252999 TEX35Q5T0J7 233 aa14.17□□□□□ -0.14
LAMA5-201ENST00000252999 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
LAMA5-201ENST00000252999 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
LAMA5-201ENST00000252999 ST18O60284 1047 aa14.16□□□□□ -0.14
LAMA5-201ENST00000252999 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
LAMA5-201ENST00000252999 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
LAMA5-201ENST00000252999 TPM1P09493 284 aa14.15□□□□□ -0.14
LAMA5-201ENST00000252999 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
LAMA5-201ENST00000252999 H3BQV1 296 aa14.14□□□□□ -0.15
LAMA5-201ENST00000252999 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
LAMA5-201ENST00000252999 MARCH6O60337 910 aa14.14□□□□□ -0.15
LAMA5-201ENST00000252999 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
LAMA5-201ENST00000252999 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
LAMA5-201ENST00000252999 DCAF11Q8TEB1 546 aa14.13□□□□□ -0.15
LAMA5-201ENST00000252999 BECN2A8MW95 431 aa14.12□□□□□ -0.15
LAMA5-201ENST00000252999 PMFBP1Q8TBY8 1022 aa14.11□□□□□ -0.15
LAMA5-201ENST00000252999 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
LAMA5-201ENST00000252999 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
LAMA5-201ENST00000252999 CCER2I3L3R5 266 aa14.11□□□□□ -0.15
LAMA5-201ENST00000252999 HMMRO75330 724 aa14.1□□□□□ -0.15
LAMA5-201ENST00000252999 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
LAMA5-201ENST00000252999 NOM1Q5C9Z4 860 aaKnown RBP14.09□□□□□ -0.15
LAMA5-201ENST00000252999 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
LAMA5-201ENST00000252999 DDX49Q9Y6V7 483 aaKnown RBP14.09□□□□□ -0.15
LAMA5-201ENST00000252999 TPM2P07951 284 aa14.09□□□□□ -0.15
LAMA5-201ENST00000252999 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
LAMA5-201ENST00000252999 STK31Q9BXU1 1019 aa14.08□□□□□ -0.15
LAMA5-201ENST00000252999 HOMER1Q86YM7 354 aa14.08□□□□□ -0.16
LAMA5-201ENST00000252999 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
LAMA5-201ENST00000252999 APPP05067 770 aa14.07□□□□□ -0.16
LAMA5-201ENST00000252999 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
LAMA5-201ENST00000252999 SLC4A10Q6U841 1118 aa14.07□□□□□ -0.16
LAMA5-201ENST00000252999 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
LAMA5-201ENST00000252999 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
LAMA5-201ENST00000252999 GSE1Q14687 1217 aa14.07□□□□□ -0.16
LAMA5-201ENST00000252999 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms