RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
COLGALT1-201ENST00000252599 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
COLGALT1-201ENST00000252599 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
COLGALT1-201ENST00000252599 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
COLGALT1-201ENST00000252599 STAC3Q96MF2 364 aa17.44■□□□□ 0.38
COLGALT1-201ENST00000252599 PDCL3Q9H2J4 239 aa17.43■□□□□ 0.38
COLGALT1-201ENST00000252599 CUX2O14529 1486 aa17.43■□□□□ 0.38
COLGALT1-201ENST00000252599 PTMSP20962 102 aa17.43■□□□□ 0.38
COLGALT1-201ENST00000252599 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
COLGALT1-201ENST00000252599 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
COLGALT1-201ENST00000252599 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
COLGALT1-201ENST00000252599 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
COLGALT1-201ENST00000252599 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
COLGALT1-201ENST00000252599 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
COLGALT1-201ENST00000252599 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
COLGALT1-201ENST00000252599 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
COLGALT1-201ENST00000252599 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
COLGALT1-201ENST00000252599 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
COLGALT1-201ENST00000252599 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
COLGALT1-201ENST00000252599 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
COLGALT1-201ENST00000252599 CERS3Q8IU89 383 aa17.35■□□□□ 0.37
COLGALT1-201ENST00000252599 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
COLGALT1-201ENST00000252599 BCCIPQ9P287 314 aaKnown RBP eCLIP17.34■□□□□ 0.37
COLGALT1-201ENST00000252599 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
COLGALT1-201ENST00000252599 FAM193AP78312 1265 aa17.33■□□□□ 0.37
COLGALT1-201ENST00000252599 NFKBIBQ15653 356 aa17.33■□□□□ 0.37
COLGALT1-201ENST00000252599 SLC4A3P48751 1232 aa17.33■□□□□ 0.36
COLGALT1-201ENST00000252599 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
COLGALT1-201ENST00000252599 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
COLGALT1-201ENST00000252599 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
COLGALT1-201ENST00000252599 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
COLGALT1-201ENST00000252599 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
COLGALT1-201ENST00000252599 FOXD1Q16676 465 aa17.28■□□□□ 0.36
COLGALT1-201ENST00000252599 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
COLGALT1-201ENST00000252599 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
COLGALT1-201ENST00000252599 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
COLGALT1-201ENST00000252599 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
COLGALT1-201ENST00000252599 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.35
COLGALT1-201ENST00000252599 ZNF830Q96NB3 372 aaPredicted RBP17.26■□□□□ 0.35
COLGALT1-201ENST00000252599 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
COLGALT1-201ENST00000252599 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
COLGALT1-201ENST00000252599 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
COLGALT1-201ENST00000252599 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
COLGALT1-201ENST00000252599 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
COLGALT1-201ENST00000252599 KIF21BO75037 1637 aa17.23■□□□□ 0.35
COLGALT1-201ENST00000252599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
COLGALT1-201ENST00000252599 SOX12O15370 315 aa17.23■□□□□ 0.35
COLGALT1-201ENST00000252599 TPM2P07951 284 aa17.23■□□□□ 0.35
COLGALT1-201ENST00000252599 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
COLGALT1-201ENST00000252599 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
COLGALT1-201ENST00000252599 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
COLGALT1-201ENST00000252599 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
COLGALT1-201ENST00000252599 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
COLGALT1-201ENST00000252599 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
COLGALT1-201ENST00000252599 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
COLGALT1-201ENST00000252599 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
COLGALT1-201ENST00000252599 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
COLGALT1-201ENST00000252599 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
COLGALT1-201ENST00000252599 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
COLGALT1-201ENST00000252599 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
COLGALT1-201ENST00000252599 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
COLGALT1-201ENST00000252599 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
COLGALT1-201ENST00000252599 PRDM4Q9UKN5 801 aa17.16■□□□□ 0.34
COLGALT1-201ENST00000252599 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
COLGALT1-201ENST00000252599 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
COLGALT1-201ENST00000252599 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
COLGALT1-201ENST00000252599 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
COLGALT1-201ENST00000252599 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
COLGALT1-201ENST00000252599 CLGNO14967 610 aa17.12■□□□□ 0.33
COLGALT1-201ENST00000252599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
COLGALT1-201ENST00000252599 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
COLGALT1-201ENST00000252599 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
COLGALT1-201ENST00000252599 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
COLGALT1-201ENST00000252599 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
COLGALT1-201ENST00000252599 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
COLGALT1-201ENST00000252599 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
COLGALT1-201ENST00000252599 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
COLGALT1-201ENST00000252599 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
COLGALT1-201ENST00000252599 PLCD4Q9BRC7 762 aa17.08■□□□□ 0.32
COLGALT1-201ENST00000252599 IGF1RP08069 1367 aa17.08■□□□□ 0.32
COLGALT1-201ENST00000252599 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
COLGALT1-201ENST00000252599 ZBTB9Q96C00 473 aa17.08■□□□□ 0.32
COLGALT1-201ENST00000252599 NESP48681 1621 aa17.07■□□□□ 0.32
COLGALT1-201ENST00000252599 CLCN1P35523 988 aa17.06■□□□□ 0.32
COLGALT1-201ENST00000252599 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
COLGALT1-201ENST00000252599 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
COLGALT1-201ENST00000252599 KCNJ4P48050 445 aa17.04■□□□□ 0.32
COLGALT1-201ENST00000252599 ESPNB1AK53 854 aa17.03■□□□□ 0.32
COLGALT1-201ENST00000252599 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
COLGALT1-201ENST00000252599 ZBTB22O15209 634 aa17.03■□□□□ 0.32
COLGALT1-201ENST00000252599 HSPA5P11021 654 aaKnown RBP17.02■□□□□ 0.32
COLGALT1-201ENST00000252599 CBX1P83916 185 aa17.02■□□□□ 0.32
COLGALT1-201ENST00000252599 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
COLGALT1-201ENST00000252599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.31
COLGALT1-201ENST00000252599 IGSF3O75054 1194 aa17.01■□□□□ 0.31
COLGALT1-201ENST00000252599 TNNT1P13805 278 aa17.01■□□□□ 0.31
COLGALT1-201ENST00000252599 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
COLGALT1-201ENST00000252599 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.01■□□□□ 0.31
COLGALT1-201ENST00000252599 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
COLGALT1-201ENST00000252599 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms