RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 STK26Q9P289 416 aa14.7□□□□□ -0.06
FAM78A-201ENST00000247295 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
FAM78A-201ENST00000247295 ARID3AQ99856 593 aa14.7□□□□□ -0.06
FAM78A-201ENST00000247295 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
FAM78A-201ENST00000247295 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
FAM78A-201ENST00000247295 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.068e-7■■□□□ 13
FAM78A-201ENST00000247295 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
FAM78A-201ENST00000247295 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
FAM78A-201ENST00000247295 FMN1Q68DA7 1419 aa14.67□□□□□ -0.06
FAM78A-201ENST00000247295 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
FAM78A-201ENST00000247295 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
FAM78A-201ENST00000247295 DNTTIP2Q5QJE6 756 aaKnown RBP14.66□□□□□ -0.06
FAM78A-201ENST00000247295 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
FAM78A-201ENST00000247295 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
FAM78A-201ENST00000247295 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
FAM78A-201ENST00000247295 IPO9Q96P70 1041 aaKnown RBP14.63□□□□□ -0.07
FAM78A-201ENST00000247295 PNNQ9H307 717 aaKnown RBP14.63□□□□□ -0.07
FAM78A-201ENST00000247295 CARMIL2Q6F5E8 1435 aa14.62□□□□□ -0.07
FAM78A-201ENST00000247295 KANK1Q14678 1352 aa14.61□□□□□ -0.07
FAM78A-201ENST00000247295 PTMAP06454 111 aaKnown RBP14.61□□□□□ -0.07
FAM78A-201ENST00000247295 KIF3BO15066 747 aa14.61□□□□□ -0.07
FAM78A-201ENST00000247295 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
FAM78A-201ENST00000247295 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
FAM78A-201ENST00000247295 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
FAM78A-201ENST00000247295 EFCAB2Q5VUJ9 269 aa14.6□□□□□ -0.07
FAM78A-201ENST00000247295 JPH4Q96JJ6 628 aa14.59□□□□□ -0.07
FAM78A-201ENST00000247295 SPRYD3Q8NCJ5 442 aa14.59□□□□□ -0.07
FAM78A-201ENST00000247295 CDK11BP21127 795 aaKnown RBP14.59□□□□□ -0.07
FAM78A-201ENST00000247295 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.07
FAM78A-201ENST00000247295 ANKRD30AQ9BXX3 1397 aa14.58□□□□□ -0.08
FAM78A-201ENST00000247295 KTN1Q86UP2 1357 aaKnown RBP14.57□□□□□ -0.08
FAM78A-201ENST00000247295 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
FAM78A-201ENST00000247295 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
FAM78A-201ENST00000247295 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.08
FAM78A-201ENST00000247295 GOLGA6L22H0YM25 854 aa14.55□□□□□ -0.08
FAM78A-201ENST00000247295 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
FAM78A-201ENST00000247295 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
FAM78A-201ENST00000247295 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
FAM78A-201ENST00000247295 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
FAM78A-201ENST00000247295 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
FAM78A-201ENST00000247295 SLKQ9H2G2 1235 aaPredicted RBP14.53□□□□□ -0.08
FAM78A-201ENST00000247295 TAOK2Q9UL54 1235 aa14.53□□□□□ -0.08
FAM78A-201ENST00000247295 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
FAM78A-201ENST00000247295 APBB1O00213 710 aa14.52□□□□□ -0.09
FAM78A-201ENST00000247295 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.09
FAM78A-201ENST00000247295 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
FAM78A-201ENST00000247295 SLC4A3P48751 1232 aa14.49□□□□□ -0.09
FAM78A-201ENST00000247295 SPAG9O60271 1321 aaKnown RBP14.49□□□□□ -0.09
FAM78A-201ENST00000247295 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
FAM78A-201ENST00000247295 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
FAM78A-201ENST00000247295 RALBP1Q15311 655 aa14.48□□□□□ -0.09
FAM78A-201ENST00000247295 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
FAM78A-201ENST00000247295 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
FAM78A-201ENST00000247295 OS9Q13438 667 aaPredicted RBP14.47□□□□□ -0.09
FAM78A-201ENST00000247295 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
FAM78A-201ENST00000247295 TRAK1Q9UPV9 953 aa14.47□□□□□ -0.09
FAM78A-201ENST00000247295 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
FAM78A-201ENST00000247295 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
FAM78A-201ENST00000247295 IGF1RP08069 1367 aa14.47□□□□□ -0.09
FAM78A-201ENST00000247295 ZNF644Q9H582 1327 aaPredicted RBP14.46□□□□□ -0.09
FAM78A-201ENST00000247295 NLRP13Q86W25 1043 aa14.46□□□□□ -0.09
FAM78A-201ENST00000247295 CCDC18Q5T9S5 1454 aa14.45□□□□□ -0.1
FAM78A-201ENST00000247295 MS4A1P11836 297 aa14.45□□□□□ -0.1
FAM78A-201ENST00000247295 GSE1Q14687 1217 aa14.45□□□□□ -0.1
FAM78A-201ENST00000247295 HDGFL2Q7Z4V5 671 aaPredicted RBP14.45□□□□□ -0.1
FAM78A-201ENST00000247295 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
FAM78A-201ENST00000247295 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
FAM78A-201ENST00000247295 WASHC2CQ9Y4E1 1318 aa14.44□□□□□ -0.1
FAM78A-201ENST00000247295 PKNOX2Q96KN3 472 aa14.43□□□□□ -0.1
FAM78A-201ENST00000247295 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
FAM78A-201ENST00000247295 RAD54L2Q9Y4B4 1467 aa14.43□□□□□ -0.1
FAM78A-201ENST00000247295 PANK3Q9H999 370 aa14.42□□□□□ -0.1
FAM78A-201ENST00000247295 RRP7AQ9Y3A4 280 aaKnown RBP14.42□□□□□ -0.1
FAM78A-201ENST00000247295 TCERG1O14776 1098 aaKnown RBP14.41□□□□□ -0.1
FAM78A-201ENST00000247295 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
FAM78A-201ENST00000247295 KCNJ4P48050 445 aa14.41□□□□□ -0.1
FAM78A-201ENST00000247295 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
FAM78A-201ENST00000247295 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
FAM78A-201ENST00000247295 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
FAM78A-201ENST00000247295 A0A0U1RQG5 324 aaPredicted RBP14.4□□□□□ -0.1
FAM78A-201ENST00000247295 PLIN1O60240 522 aa14.4□□□□□ -0.1
FAM78A-201ENST00000247295 USP35Q9P2H5 1018 aa14.39□□□□□ -0.11
FAM78A-201ENST00000247295 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
FAM78A-201ENST00000247295 CHMP4BQ9H444 224 aaKnown RBP14.39□□□□□ -0.11
FAM78A-201ENST00000247295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.39□□□□□ -0.11
FAM78A-201ENST00000247295 FGD1P98174 961 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 PHLDB1Q86UU1 1377 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 GOLGA6L3A6NEY3 463 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
FAM78A-201ENST00000247295 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
FAM78A-201ENST00000247295 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
FAM78A-201ENST00000247295 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
FAM78A-201ENST00000247295 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
FAM78A-201ENST00000247295 PTPRGP23470 1445 aa14.36□□□□□ -0.11
FAM78A-201ENST00000247295 USP47Q96K76 1375 aa14.35□□□□□ -0.11
FAM78A-201ENST00000247295 IPO8O15397 1037 aaKnown RBP14.35□□□□□ -0.11
FAM78A-201ENST00000247295 ELL2O00472 640 aaPredicted RBP14.34□□□□□ -0.11
FAM78A-201ENST00000247295 PDE4AP27815 886 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms