RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
SNAI1-201ENST00000244050 ITGAEP38570 1179 aa18.68■□□□□ 0.58
SNAI1-201ENST00000244050 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
SNAI1-201ENST00000244050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.65■□□□□ 0.582e-7■□□□□ 9.9
SNAI1-201ENST00000244050 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
SNAI1-201ENST00000244050 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
SNAI1-201ENST00000244050 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
SNAI1-201ENST00000244050 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
SNAI1-201ENST00000244050 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
SNAI1-201ENST00000244050 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
SNAI1-201ENST00000244050 ATP10BO94823 1461 aa18.59■□□□□ 0.57
SNAI1-201ENST00000244050 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
SNAI1-201ENST00000244050 KIF14Q15058 1648 aa18.55■□□□□ 0.56
SNAI1-201ENST00000244050 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
SNAI1-201ENST00000244050 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
SNAI1-201ENST00000244050 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
SNAI1-201ENST00000244050 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.55
SNAI1-201ENST00000244050 ARAP3Q8WWN8 1544 aa18.51■□□□□ 0.55
SNAI1-201ENST00000244050 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
SNAI1-201ENST00000244050 ABCA9Q8IUA7 1624 aa18.48■□□□□ 0.55
SNAI1-201ENST00000244050 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
SNAI1-201ENST00000244050 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
SNAI1-201ENST00000244050 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
SNAI1-201ENST00000244050 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
SNAI1-201ENST00000244050 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
SNAI1-201ENST00000244050 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
SNAI1-201ENST00000244050 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
SNAI1-201ENST00000244050 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
SNAI1-201ENST00000244050 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
SNAI1-201ENST00000244050 CAMSAP2Q08AD1 1489 aa18.4■□□□□ 0.54
SNAI1-201ENST00000244050 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
SNAI1-201ENST00000244050 NEO1Q92859 1461 aa18.4■□□□□ 0.54
SNAI1-201ENST00000244050 MIER1Q8N108 512 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
SNAI1-201ENST00000244050 DAPK1P53355 1430 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
SNAI1-201ENST00000244050 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
SNAI1-201ENST00000244050 ADAMTSL3P82987 1691 aa18.36■□□□□ 0.53
SNAI1-201ENST00000244050 NAIPQ13075 1403 aa18.35■□□□□ 0.53
SNAI1-201ENST00000244050 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
SNAI1-201ENST00000244050 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
SNAI1-201ENST00000244050 AKNAQ7Z591 1439 aa18.35■□□□□ 0.53
SNAI1-201ENST00000244050 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
SNAI1-201ENST00000244050 CDC42BPBQ9Y5S2 1711 aa18.34■□□□□ 0.53
SNAI1-201ENST00000244050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.532e-6■■■■□ 21.9
SNAI1-201ENST00000244050 ABCC5O15440 1437 aa18.33■□□□□ 0.53
SNAI1-201ENST00000244050 CROCC2H7BZ55 1655 aa18.33■□□□□ 0.53
SNAI1-201ENST00000244050 PTPRMP28827 1452 aa18.32■□□□□ 0.52
SNAI1-201ENST00000244050 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
SNAI1-201ENST00000244050 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
SNAI1-201ENST00000244050 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
SNAI1-201ENST00000244050 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
SNAI1-201ENST00000244050 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
SNAI1-201ENST00000244050 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
SNAI1-201ENST00000244050 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
SNAI1-201ENST00000244050 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.51
SNAI1-201ENST00000244050 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
SNAI1-201ENST00000244050 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
SNAI1-201ENST00000244050 ARHGEF40Q8TER5 1519 aa18.25■□□□□ 0.51
SNAI1-201ENST00000244050 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
SNAI1-201ENST00000244050 FANCAO15360 1455 aa18.25■□□□□ 0.51
SNAI1-201ENST00000244050 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
SNAI1-201ENST00000244050 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
SNAI1-201ENST00000244050 SHANK2Q9UPX8 1470 aa18.22■□□□□ 0.51
SNAI1-201ENST00000244050 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
SNAI1-201ENST00000244050 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
SNAI1-201ENST00000244050 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
SNAI1-201ENST00000244050 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
SNAI1-201ENST00000244050 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
SNAI1-201ENST00000244050 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
SNAI1-201ENST00000244050 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
SNAI1-201ENST00000244050 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
SNAI1-201ENST00000244050 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNAI1-201ENST00000244050 PLCH2O75038 1416 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 NCOA1Q15788 1441 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 MBD5Q9P267 1494 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
SNAI1-201ENST00000244050 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
SNAI1-201ENST00000244050 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
SNAI1-201ENST00000244050 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
SNAI1-201ENST00000244050 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
SNAI1-201ENST00000244050 RIMS1Q86UR5 1692 aaKnown RBP18.16■□□□□ 0.5
SNAI1-201ENST00000244050 ZFYVE16Q7Z3T8 1539 aa18.15■□□□□ 0.5
SNAI1-201ENST00000244050 RSPH4AQ5TD94 716 aa18.15■□□□□ 0.5
SNAI1-201ENST00000244050 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
SNAI1-201ENST00000244050 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
SNAI1-201ENST00000244050 MAGI2Q86UL8 1455 aa18.13■□□□□ 0.49
SNAI1-201ENST00000244050 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
SNAI1-201ENST00000244050 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
SNAI1-201ENST00000244050 KIAA1107Q9UPP5 1409 aa18.13■□□□□ 0.49
SNAI1-201ENST00000244050 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
SNAI1-201ENST00000244050 FBXO41Q8TF61 875 aa18.12■□□□□ 0.49
SNAI1-201ENST00000244050 ABCC1P33527 1531 aa18.11■□□□□ 0.49
SNAI1-201ENST00000244050 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
SNAI1-201ENST00000244050 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms