RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
EXOSC9-201ENST00000243498 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.17
EXOSC9-201ENST00000243498 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
EXOSC9-201ENST00000243498 PLB1Q6P1J6 1458 aa13.96□□□□□ -0.18
EXOSC9-201ENST00000243498 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.18
EXOSC9-201ENST00000243498 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
EXOSC9-201ENST00000243498 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
EXOSC9-201ENST00000243498 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
EXOSC9-201ENST00000243498 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
EXOSC9-201ENST00000243498 KANK4Q5T7N3 995 aaPredicted RBP13.93□□□□□ -0.18
EXOSC9-201ENST00000243498 UHRF1BP1LA0JNW5 1464 aa13.92□□□□□ -0.18
EXOSC9-201ENST00000243498 ABCC2Q92887 1545 aa13.92□□□□□ -0.18
EXOSC9-201ENST00000243498 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
EXOSC9-201ENST00000243498 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
EXOSC9-201ENST00000243498 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
EXOSC9-201ENST00000243498 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
EXOSC9-201ENST00000243498 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
EXOSC9-201ENST00000243498 ATP10BO94823 1461 aa13.88□□□□□ -0.19
EXOSC9-201ENST00000243498 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXOSC9-201ENST00000243498 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
EXOSC9-201ENST00000243498 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
EXOSC9-201ENST00000243498 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
EXOSC9-201ENST00000243498 KDM5BQ9UGL1 1544 aa13.84□□□□□ -0.19
EXOSC9-201ENST00000243498 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
EXOSC9-201ENST00000243498 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
EXOSC9-201ENST00000243498 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
EXOSC9-201ENST00000243498 NCOA2Q15596 1464 aa13.82□□□□□ -0.2
EXOSC9-201ENST00000243498 ZCCHC11Q5TAX3 1644 aaKnown RBP13.81□□□□□ -0.2
EXOSC9-201ENST00000243498 ADCY10Q96PN6 1610 aa13.81□□□□□ -0.2
EXOSC9-201ENST00000243498 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
EXOSC9-201ENST00000243498 KIF14Q15058 1648 aa13.8□□□□□ -0.2
EXOSC9-201ENST00000243498 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
EXOSC9-201ENST00000243498 HAX1O00165 279 aa13.78□□□□□ -0.2
EXOSC9-201ENST00000243498 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
EXOSC9-201ENST00000243498 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
EXOSC9-201ENST00000243498 MYOM3Q5VTT5 1437 aa13.77□□□□□ -0.21
EXOSC9-201ENST00000243498 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
EXOSC9-201ENST00000243498 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
EXOSC9-201ENST00000243498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
EXOSC9-201ENST00000243498 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
EXOSC9-201ENST00000243498 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
EXOSC9-201ENST00000243498 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
EXOSC9-201ENST00000243498 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
EXOSC9-201ENST00000243498 FAM50AQ14320 339 aaKnown RBP13.72□□□□□ -0.21
EXOSC9-201ENST00000243498 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
EXOSC9-201ENST00000243498 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
EXOSC9-201ENST00000243498 CFDP1Q9UEE9 299 aaPredicted RBP13.7□□□□□ -0.22
EXOSC9-201ENST00000243498 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
EXOSC9-201ENST00000243498 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
EXOSC9-201ENST00000243498 ASXL2Q76L83 1435 aa13.69□□□□□ -0.22
EXOSC9-201ENST00000243498 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
EXOSC9-201ENST00000243498 GPATCH8Q9UKJ3 1502 aaKnown RBP13.68□□□□□ -0.22
EXOSC9-201ENST00000243498 CDC42BPAQ5VT25 1732 aa13.68□□□□□ -0.22
EXOSC9-201ENST00000243498 MYO5CQ9NQX4 1742 aa13.68□□□□□ -0.22
EXOSC9-201ENST00000243498 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
EXOSC9-201ENST00000243498 MAPKBP1O60336 1514 aa13.67□□□□□ -0.22
EXOSC9-201ENST00000243498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.66□□□□□ -0.22
EXOSC9-201ENST00000243498 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
EXOSC9-201ENST00000243498 RSPH4AQ5TD94 716 aa13.64□□□□□ -0.23
EXOSC9-201ENST00000243498 ABCA9Q8IUA7 1624 aa13.63□□□□□ -0.23
EXOSC9-201ENST00000243498 ITGAEP38570 1179 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 CDC42BPBQ9Y5S2 1711 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 PLCH2O75038 1416 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 ARHGAP5Q13017 1502 aa13.62□□□□□ -0.23
EXOSC9-201ENST00000243498 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
EXOSC9-201ENST00000243498 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
EXOSC9-201ENST00000243498 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
EXOSC9-201ENST00000243498 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
EXOSC9-201ENST00000243498 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
EXOSC9-201ENST00000243498 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
EXOSC9-201ENST00000243498 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
EXOSC9-201ENST00000243498 GLI2P10070 1586 aa13.57□□□□□ -0.24
EXOSC9-201ENST00000243498 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
EXOSC9-201ENST00000243498 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
EXOSC9-201ENST00000243498 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
EXOSC9-201ENST00000243498 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
EXOSC9-201ENST00000243498 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
EXOSC9-201ENST00000243498 DAPK1P53355 1430 aa13.55□□□□□ -0.24
EXOSC9-201ENST00000243498 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
EXOSC9-201ENST00000243498 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-201ENST00000243498 HRCP23327 699 aa13.54□□□□□ -0.24
EXOSC9-201ENST00000243498 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
EXOSC9-201ENST00000243498 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
EXOSC9-201ENST00000243498 AKNAQ7Z591 1439 aa13.53□□□□□ -0.24
EXOSC9-201ENST00000243498 FANCAO15360 1455 aa13.52□□□□□ -0.24
EXOSC9-201ENST00000243498 ROCK1Q13464 1354 aa13.52□□□□□ -0.24
EXOSC9-201ENST00000243498 C19orf67A6NJJ6 358 aa13.52□□□□□ -0.25
EXOSC9-201ENST00000243498 ABCC5O15440 1437 aa13.52□□□□□ -0.25
EXOSC9-201ENST00000243498 EVX2Q03828 476 aa13.52□□□□□ -0.25
EXOSC9-201ENST00000243498 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.25
EXOSC9-201ENST00000243498 FAM69CQ0P6D2 419 aa13.51□□□□□ -0.25
EXOSC9-201ENST00000243498 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
EXOSC9-201ENST00000243498 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
EXOSC9-201ENST00000243498 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
EXOSC9-201ENST00000243498 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
EXOSC9-201ENST00000243498 DIP2BQ9P265 1576 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms