RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
EGR1-201ENST00000239938 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
EGR1-201ENST00000239938 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
EGR1-201ENST00000239938 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
EGR1-201ENST00000239938 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
EGR1-201ENST00000239938 ANKRD30BQ9BXX2 1392 aa19.05■□□□□ 0.64
EGR1-201ENST00000239938 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
EGR1-201ENST00000239938 TEX14Q8IWB6 1497 aa19.05■□□□□ 0.64
EGR1-201ENST00000239938 NBR1Q14596 966 aa19.04■□□□□ 0.64
EGR1-201ENST00000239938 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
EGR1-201ENST00000239938 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
EGR1-201ENST00000239938 LAMC3Q9Y6N6 1575 aa19.03■□□□□ 0.64
EGR1-201ENST00000239938 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
EGR1-201ENST00000239938 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
EGR1-201ENST00000239938 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
EGR1-201ENST00000239938 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
EGR1-201ENST00000239938 MIA2Q96PC5 1412 aa18.99■□□□□ 0.63
EGR1-201ENST00000239938 DEKP35659 375 aaKnown RBP18.99■□□□□ 0.63
EGR1-201ENST00000239938 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
EGR1-201ENST00000239938 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
EGR1-201ENST00000239938 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
EGR1-201ENST00000239938 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
EGR1-201ENST00000239938 RNF123Q5XPI4 1314 aa18.94■□□□□ 0.62
EGR1-201ENST00000239938 DAPK1P53355 1430 aa18.94■□□□□ 0.62
EGR1-201ENST00000239938 BCORL1Q5H9F3 1711 aa18.93■□□□□ 0.62
EGR1-201ENST00000239938 ZNF644Q9H582 1327 aaPredicted RBP18.92■□□□□ 0.62
EGR1-201ENST00000239938 ABCC5O15440 1437 aa18.92■□□□□ 0.62
EGR1-201ENST00000239938 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
EGR1-201ENST00000239938 WDR62O43379 1518 aa18.91■□□□□ 0.62
EGR1-201ENST00000239938 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
EGR1-201ENST00000239938 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
EGR1-201ENST00000239938 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.62
EGR1-201ENST00000239938 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
EGR1-201ENST00000239938 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
EGR1-201ENST00000239938 IQGAP2Q13576 1575 aa18.87■□□□□ 0.61
EGR1-201ENST00000239938 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
EGR1-201ENST00000239938 PZPP20742 1482 aa18.86■□□□□ 0.61
EGR1-201ENST00000239938 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
EGR1-201ENST00000239938 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
EGR1-201ENST00000239938 USP47Q96K76 1375 aa18.83■□□□□ 0.6
EGR1-201ENST00000239938 POLR3GLQ9BT43 218 aa18.81■□□□□ 0.6
EGR1-201ENST00000239938 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
EGR1-201ENST00000239938 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
EGR1-201ENST00000239938 KDM5CP41229 1560 aa18.8■□□□□ 0.6
EGR1-201ENST00000239938 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
EGR1-201ENST00000239938 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
EGR1-201ENST00000239938 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
EGR1-201ENST00000239938 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
EGR1-201ENST00000239938 KIF14Q15058 1648 aa18.76■□□□□ 0.59
EGR1-201ENST00000239938 NUP153P49790 1475 aaKnown RBP18.75■□□□□ 0.59
EGR1-201ENST00000239938 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
EGR1-201ENST00000239938 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
EGR1-201ENST00000239938 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
EGR1-201ENST00000239938 KIAA1107Q9UPP5 1409 aa18.74■□□□□ 0.59
EGR1-201ENST00000239938 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
EGR1-201ENST00000239938 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
EGR1-201ENST00000239938 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
EGR1-201ENST00000239938 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
EGR1-201ENST00000239938 PKD2Q13563 968 aa18.71■□□□□ 0.59
EGR1-201ENST00000239938 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
EGR1-201ENST00000239938 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
EGR1-201ENST00000239938 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
EGR1-201ENST00000239938 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
EGR1-201ENST00000239938 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
EGR1-201ENST00000239938 EXOC6Q8TAG9 804 aa18.68■□□□□ 0.58
EGR1-201ENST00000239938 ADGBQ8N7X0 1667 aa18.68■□□□□ 0.58
EGR1-201ENST00000239938 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
EGR1-201ENST00000239938 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
EGR1-201ENST00000239938 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
EGR1-201ENST00000239938 RAPGEF6Q8TEU7 1601 aa18.66■□□□□ 0.58
EGR1-201ENST00000239938 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
EGR1-201ENST00000239938 KIF15Q9NS87 1388 aa18.65■□□□□ 0.58
EGR1-201ENST00000239938 IL27Q8NEV9 243 aa18.65■□□□□ 0.58
EGR1-201ENST00000239938 ADGRL2O95490 1459 aa18.65■□□□□ 0.58
EGR1-201ENST00000239938 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
EGR1-201ENST00000239938 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.57
EGR1-201ENST00000239938 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
EGR1-201ENST00000239938 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
EGR1-201ENST00000239938 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
EGR1-201ENST00000239938 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
EGR1-201ENST00000239938 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
EGR1-201ENST00000239938 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
EGR1-201ENST00000239938 E9PCH4 1651 aa18.62■□□□□ 0.57
EGR1-201ENST00000239938 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
EGR1-201ENST00000239938 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
EGR1-201ENST00000239938 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
EGR1-201ENST00000239938 RCAN3Q9UKA8 241 aa18.6■□□□□ 0.57
EGR1-201ENST00000239938 RTL5Q5HYW3 569 aaPredicted RBP18.59■□□□□ 0.57
EGR1-201ENST00000239938 PDE4AP27815 886 aa18.59■□□□□ 0.57
EGR1-201ENST00000239938 ANKRD50Q9ULJ7 1429 aa18.59■□□□□ 0.57
EGR1-201ENST00000239938 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
EGR1-201ENST00000239938 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.57
EGR1-201ENST00000239938 KDM2AQ9Y2K7 1162 aa18.58■□□□□ 0.56
EGR1-201ENST00000239938 RALBP1Q15311 655 aa18.58■□□□□ 0.56
EGR1-201ENST00000239938 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
EGR1-201ENST00000239938 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
EGR1-201ENST00000239938 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
EGR1-201ENST00000239938 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
EGR1-201ENST00000239938 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
EGR1-201ENST00000239938 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms