RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 NUP160Q12769 1436 aa16.47■□□□□ 0.23
PCDHB12-201ENST00000239450 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
PCDHB12-201ENST00000239450 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
PCDHB12-201ENST00000239450 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
PCDHB12-201ENST00000239450 EFCAB2Q5VUJ9 269 aa16.44■□□□□ 0.22
PCDHB12-201ENST00000239450 NUP155O75694 1391 aa16.44■□□□□ 0.22
PCDHB12-201ENST00000239450 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
PCDHB12-201ENST00000239450 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
PCDHB12-201ENST00000239450 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
PCDHB12-201ENST00000239450 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
PCDHB12-201ENST00000239450 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
PCDHB12-201ENST00000239450 ATP10BO94823 1461 aa16.41■□□□□ 0.22
PCDHB12-201ENST00000239450 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PCDHB12-201ENST00000239450 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
PCDHB12-201ENST00000239450 NAIPQ13075 1403 aa16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 PTPN23Q9H3S7 1636 aa16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
PCDHB12-201ENST00000239450 ANP32CO43423 234 aa16.37■□□□□ 0.21
PCDHB12-201ENST00000239450 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
PCDHB12-201ENST00000239450 DAPK1P53355 1430 aa16.36■□□□□ 0.21
PCDHB12-201ENST00000239450 MIA2Q96PC5 1412 aa16.35■□□□□ 0.21
PCDHB12-201ENST00000239450 ABCC5O15440 1437 aa16.34■□□□□ 0.21
PCDHB12-201ENST00000239450 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
PCDHB12-201ENST00000239450 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.21
PCDHB12-201ENST00000239450 ARHGAP5Q13017 1502 aa16.33■□□□□ 0.21
PCDHB12-201ENST00000239450 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
PCDHB12-201ENST00000239450 GGT6Q6P531 493 aa16.33■□□□□ 0.2
PCDHB12-201ENST00000239450 CHD1O14646 1710 aa16.32■□□□□ 0.2
PCDHB12-201ENST00000239450 KIF15Q9NS87 1388 aa16.32■□□□□ 0.2
PCDHB12-201ENST00000239450 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHB12-201ENST00000239450 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
PCDHB12-201ENST00000239450 KIF3BO15066 747 aa16.32■□□□□ 0.2
PCDHB12-201ENST00000239450 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
PCDHB12-201ENST00000239450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHB12-201ENST00000239450 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
PCDHB12-201ENST00000239450 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
PCDHB12-201ENST00000239450 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
PCDHB12-201ENST00000239450 KIF14Q15058 1648 aa16.27■□□□□ 0.2
PCDHB12-201ENST00000239450 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
PCDHB12-201ENST00000239450 MLECQ14165 292 aa16.27■□□□□ 0.19
PCDHB12-201ENST00000239450 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
PCDHB12-201ENST00000239450 MYT1Q01538 1121 aa16.24■□□□□ 0.19
PCDHB12-201ENST00000239450 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
PCDHB12-201ENST00000239450 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
PCDHB12-201ENST00000239450 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
PCDHB12-201ENST00000239450 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
PCDHB12-201ENST00000239450 FAM69CQ0P6D2 419 aa16.21■□□□□ 0.19
PCDHB12-201ENST00000239450 NCOA1Q15788 1441 aa16.21■□□□□ 0.18
PCDHB12-201ENST00000239450 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
PCDHB12-201ENST00000239450 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
PCDHB12-201ENST00000239450 NEFLP07196 543 aa16.18■□□□□ 0.18
PCDHB12-201ENST00000239450 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
PCDHB12-201ENST00000239450 NBPF8Q3BBV2 869 aa16.18■□□□□ 0.18
PCDHB12-201ENST00000239450 SCAPERQ9BY12 1400 aa16.17■□□□□ 0.18
PCDHB12-201ENST00000239450 NUTM2DQ5VT03 806 aaPredicted RBP16.17■□□□□ 0.18
PCDHB12-201ENST00000239450 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
PCDHB12-201ENST00000239450 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
PCDHB12-201ENST00000239450 ABCA8O94911 1581 aa16.15■□□□□ 0.18
PCDHB12-201ENST00000239450 TCOF1Q13428 1488 aaKnown RBP16.15■□□□□ 0.18
PCDHB12-201ENST00000239450 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
PCDHB12-201ENST00000239450 BCANQ96GW7 911 aa16.13■□□□□ 0.17
PCDHB12-201ENST00000239450 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
PCDHB12-201ENST00000239450 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
PCDHB12-201ENST00000239450 KDM6BO15054 1643 aa16.12■□□□□ 0.17
PCDHB12-201ENST00000239450 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
PCDHB12-201ENST00000239450 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
PCDHB12-201ENST00000239450 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
PCDHB12-201ENST00000239450 ASXL2Q76L83 1435 aa16.1■□□□□ 0.17
PCDHB12-201ENST00000239450 KANK1Q14678 1352 aa16.09■□□□□ 0.17
PCDHB12-201ENST00000239450 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
PCDHB12-201ENST00000239450 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDHB12-201ENST00000239450 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
PCDHB12-201ENST00000239450 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
PCDHB12-201ENST00000239450 TRAPPC8Q9Y2L5 1435 aa16.07■□□□□ 0.16
PCDHB12-201ENST00000239450 ANKRD30BQ9BXX2 1392 aa16.07■□□□□ 0.16
PCDHB12-201ENST00000239450 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
PCDHB12-201ENST00000239450 ST20-MTHFSA0A0A6YYL1 179 aa16.06■□□□□ 0.16
PCDHB12-201ENST00000239450 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
PCDHB12-201ENST00000239450 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
PCDHB12-201ENST00000239450 ROCK2O75116 1388 aaKnown RBP16.05■□□□□ 0.16
PCDHB12-201ENST00000239450 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
PCDHB12-201ENST00000239450 ABCC10Q5T3U5 1492 aa16.05■□□□□ 0.16
PCDHB12-201ENST00000239450 ITSN2Q9NZM3 1697 aa16.04■□□□□ 0.16
PCDHB12-201ENST00000239450 FANCAO15360 1455 aa16.04■□□□□ 0.16
PCDHB12-201ENST00000239450 PLCH2O75038 1416 aa16.04■□□□□ 0.16
PCDHB12-201ENST00000239450 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
PCDHB12-201ENST00000239450 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
PCDHB12-201ENST00000239450 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
PCDHB12-201ENST00000239450 ADGRL1O94910 1474 aa16.02■□□□□ 0.15
PCDHB12-201ENST00000239450 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.02■□□□□ 0.15
PCDHB12-201ENST00000239450 WDR7Q9Y4E6 1490 aa16.02■□□□□ 0.15
PCDHB12-201ENST00000239450 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
PCDHB12-201ENST00000239450 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
PCDHB12-201ENST00000239450 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
PCDHB12-201ENST00000239450 USP47Q96K76 1375 aa15.98■□□□□ 0.15
PCDHB12-201ENST00000239450 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
PCDHB12-201ENST00000239450 STK26Q9P289 416 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms