RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
CCDC170-201ENST00000239374 CNTLNQ9NXG0 1405 aa14.3□□□□□ -0.12
CCDC170-201ENST00000239374 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
CCDC170-201ENST00000239374 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
CCDC170-201ENST00000239374 NLRP13Q86W25 1043 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 USP35Q9P2H5 1018 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 TMF1P82094 1093 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 PLIN1O60240 522 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 SLC4A3P48751 1232 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 CDCA8Q53HL2 280 aa14.28□□□□□ -0.12
CCDC170-201ENST00000239374 TRIM44Q96DX7 344 aaPredicted RBP14.27□□□□□ -0.13
CCDC170-201ENST00000239374 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
CCDC170-201ENST00000239374 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
CCDC170-201ENST00000239374 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
CCDC170-201ENST00000239374 NUP155O75694 1391 aa14.25□□□□□ -0.13
CCDC170-201ENST00000239374 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
CCDC170-201ENST00000239374 MYBBP1AQ9BQG0 1328 aaKnown RBP14.24□□□□□ -0.13
CCDC170-201ENST00000239374 USP47Q96K76 1375 aa14.24□□□□□ -0.13
CCDC170-201ENST00000239374 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
CCDC170-201ENST00000239374 KIF15Q9NS87 1388 aa14.23□□□□□ -0.13
CCDC170-201ENST00000239374 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
CCDC170-201ENST00000239374 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
CCDC170-201ENST00000239374 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
CCDC170-201ENST00000239374 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
CCDC170-201ENST00000239374 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
CCDC170-201ENST00000239374 FTSJ3Q8IY81 847 aaKnown RBP14.21□□□□□ -0.13
CCDC170-201ENST00000239374 GSE1Q14687 1217 aa14.21□□□□□ -0.14
CCDC170-201ENST00000239374 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
CCDC170-201ENST00000239374 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
CCDC170-201ENST00000239374 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
CCDC170-201ENST00000239374 MS4A1P11836 297 aa14.19□□□□□ -0.14
CCDC170-201ENST00000239374 L1TD1Q5T7N2 865 aaKnown RBP14.18□□□□□ -0.14
CCDC170-201ENST00000239374 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
CCDC170-201ENST00000239374 CASKIN1Q8WXD9 1431 aa14.17□□□□□ -0.14
CCDC170-201ENST00000239374 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
CCDC170-201ENST00000239374 GOLGA2Q08379 1002 aa14.17□□□□□ -0.14
CCDC170-201ENST00000239374 NBPF8Q3BBV2 869 aa14.16□□□□□ -0.14
CCDC170-201ENST00000239374 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
CCDC170-201ENST00000239374 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
CCDC170-201ENST00000239374 GZF1Q9H116 711 aaPredicted RBP14.15□□□□□ -0.14
CCDC170-201ENST00000239374 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
CCDC170-201ENST00000239374 GOLGA6L22H0YM25 854 aa14.15□□□□□ -0.14
CCDC170-201ENST00000239374 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
CCDC170-201ENST00000239374 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
CCDC170-201ENST00000239374 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
CCDC170-201ENST00000239374 HFM1A2PYH4 1435 aa14.14□□□□□ -0.15
CCDC170-201ENST00000239374 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
CCDC170-201ENST00000239374 CENPQQ7L2Z9 268 aaPredicted RBP14.13□□□□□ -0.15
CCDC170-201ENST00000239374 ZNF644Q9H582 1327 aaPredicted RBP14.13□□□□□ -0.15
CCDC170-201ENST00000239374 CCDC146Q8IYE0 955 aa14.13□□□□□ -0.15
CCDC170-201ENST00000239374 CUX1P39880 1505 aa14.13□□□□□ -0.15
CCDC170-201ENST00000239374 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
CCDC170-201ENST00000239374 PANK3Q9H999 370 aa14.13□□□□□ -0.15
CCDC170-201ENST00000239374 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
CCDC170-201ENST00000239374 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
CCDC170-201ENST00000239374 MAPKBP1O60336 1514 aa14.11□□□□□ -0.15
CCDC170-201ENST00000239374 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
CCDC170-201ENST00000239374 NFKBIBQ15653 356 aa14.1□□□□□ -0.15
CCDC170-201ENST00000239374 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
CCDC170-201ENST00000239374 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
CCDC170-201ENST00000239374 HSCBQ8IWL3 235 aa14.1□□□□□ -0.15
CCDC170-201ENST00000239374 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
CCDC170-201ENST00000239374 PNISRQ8TF01 805 aaKnown RBP14.09□□□□□ -0.15
CCDC170-201ENST00000239374 CFTRP13569 1480 aa14.09□□□□□ -0.15
CCDC170-201ENST00000239374 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CCDC170-201ENST00000239374 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.15
CCDC170-201ENST00000239374 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
CCDC170-201ENST00000239374 NAIPQ13075 1403 aa14.07□□□□□ -0.16
CCDC170-201ENST00000239374 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
CCDC170-201ENST00000239374 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
CCDC170-201ENST00000239374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC170-201ENST00000239374 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
CCDC170-201ENST00000239374 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
CCDC170-201ENST00000239374 ARID4BQ4LE39 1312 aaPredicted RBP14.06□□□□□ -0.16
CCDC170-201ENST00000239374 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
CCDC170-201ENST00000239374 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
CCDC170-201ENST00000239374 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
CCDC170-201ENST00000239374 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
CCDC170-201ENST00000239374 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
CCDC170-201ENST00000239374 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
CCDC170-201ENST00000239374 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
CCDC170-201ENST00000239374 CENPJQ9HC77 1338 aaPredicted RBP14.03□□□□□ -0.16
CCDC170-201ENST00000239374 MFAP1P55081 439 aaKnown RBP14.03□□□□□ -0.16
CCDC170-201ENST00000239374 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.16
CCDC170-201ENST00000239374 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
CCDC170-201ENST00000239374 COG6Q9Y2V7 657 aa14.01□□□□□ -0.17
CCDC170-201ENST00000239374 PDS5BQ9NTI5 1447 aa14.01□□□□□ -0.17
CCDC170-201ENST00000239374 APAF1O14727 1248 aa14□□□□□ -0.17
CCDC170-201ENST00000239374 MAP3K1Q13233 1512 aa14□□□□□ -0.17
CCDC170-201ENST00000239374 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
CCDC170-201ENST00000239374 CCDC144AA2RUR9 1427 aa14□□□□□ -0.17
CCDC170-201ENST00000239374 PCF11O94913 1555 aaKnown RBP13.99□□□□□ -0.17
CCDC170-201ENST00000239374 FRAT2O75474 233 aaPredicted RBP13.99□□□□□ -0.17
CCDC170-201ENST00000239374 BCL2L13Q9BXK5 485 aa13.99□□□□□ -0.17
CCDC170-201ENST00000239374 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
CCDC170-201ENST00000239374 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCDC170-201ENST00000239374 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
CCDC170-201ENST00000239374 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
CCDC170-201ENST00000239374 ITPRIPQ8IWB1 547 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms