RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 FRMPD1Q5SYB0 1578 aa14.51□□□□□ -0.09
TGFB3-201ENST00000238682 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
TGFB3-201ENST00000238682 PLCH2O75038 1416 aa14.5□□□□□ -0.09
TGFB3-201ENST00000238682 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
TGFB3-201ENST00000238682 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
TGFB3-201ENST00000238682 P3H3Q8IVL6 736 aa14.49□□□□□ -0.09
TGFB3-201ENST00000238682 FANCAO15360 1455 aa14.49□□□□□ -0.09
TGFB3-201ENST00000238682 RICTORQ6R327 1708 aa14.48□□□□□ -0.09
TGFB3-201ENST00000238682 ZBTB22O15209 634 aa14.47□□□□□ -0.09
TGFB3-201ENST00000238682 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
TGFB3-201ENST00000238682 POGZQ7Z3K3 1410 aa14.47□□□□□ -0.09
TGFB3-201ENST00000238682 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.09
TGFB3-201ENST00000238682 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
TGFB3-201ENST00000238682 TPRNQ4KMQ1 711 aa14.46□□□□□ -0.1
TGFB3-201ENST00000238682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
TGFB3-201ENST00000238682 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
TGFB3-201ENST00000238682 REREQ9P2R6 1566 aa14.45□□□□□ -0.1
TGFB3-201ENST00000238682 ZFYVE16Q7Z3T8 1539 aa14.44□□□□□ -0.1
TGFB3-201ENST00000238682 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
TGFB3-201ENST00000238682 CDK13Q14004 1512 aaKnown RBP14.43□□□□□ -0.1
TGFB3-201ENST00000238682 BCORL1Q5H9F3 1711 aa14.43□□□□□ -0.1
TGFB3-201ENST00000238682 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
TGFB3-201ENST00000238682 ZNF518AQ6AHZ1 1483 aa14.4□□□□□ -0.1
TGFB3-201ENST00000238682 KDM5CP41229 1560 aa14.4□□□□□ -0.1
TGFB3-201ENST00000238682 TIAM1Q13009 1591 aa14.4□□□□□ -0.1
TGFB3-201ENST00000238682 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
TGFB3-201ENST00000238682 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
TGFB3-201ENST00000238682 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
TGFB3-201ENST00000238682 APLP2Q06481 763 aa14.36□□□□□ -0.11
TGFB3-201ENST00000238682 ATP10AO60312 1499 aa14.36□□□□□ -0.11
TGFB3-201ENST00000238682 MLH3Q9UHC1 1453 aa14.35□□□□□ -0.11
TGFB3-201ENST00000238682 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
TGFB3-201ENST00000238682 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 AGLP35573 1532 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 PTPRMP28827 1452 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 ABCC1P33527 1531 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 EHBP1L1Q8N3D4 1523 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
TGFB3-201ENST00000238682 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
TGFB3-201ENST00000238682 ARHGEF12Q9NZN5 1544 aa14.32□□□□□ -0.12
TGFB3-201ENST00000238682 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
TGFB3-201ENST00000238682 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
TGFB3-201ENST00000238682 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
TGFB3-201ENST00000238682 BCANQ96GW7 911 aa14.3□□□□□ -0.12
TGFB3-201ENST00000238682 LRRC9Q6ZRR7 1453 aa14.3□□□□□ -0.12
TGFB3-201ENST00000238682 MADDQ8WXG6 1647 aa14.29□□□□□ -0.12
TGFB3-201ENST00000238682 RAPGEF3O95398 923 aa14.29□□□□□ -0.12
TGFB3-201ENST00000238682 FAM135AQ9P2D6 1515 aa14.28□□□□□ -0.12
TGFB3-201ENST00000238682 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
TGFB3-201ENST00000238682 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
TGFB3-201ENST00000238682 SUPT6HQ7KZ85 1726 aaKnown RBP14.26□□□□□ -0.13
TGFB3-201ENST00000238682 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
TGFB3-201ENST00000238682 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
TGFB3-201ENST00000238682 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
TGFB3-201ENST00000238682 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
TGFB3-201ENST00000238682 RIMS1Q86UR5 1692 aaKnown RBP14.24□□□□□ -0.13
TGFB3-201ENST00000238682 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
TGFB3-201ENST00000238682 YEATS2Q9ULM3 1422 aa14.23□□□□□ -0.13
TGFB3-201ENST00000238682 ERICH6Q7L0X2 663 aa14.23□□□□□ -0.13
TGFB3-201ENST00000238682 GPATCH8Q9UKJ3 1502 aaKnown RBP14.22□□□□□ -0.13
TGFB3-201ENST00000238682 ARID4BQ4LE39 1312 aaPredicted RBP14.21□□□□□ -0.13
TGFB3-201ENST00000238682 MROH2AA6NES4 1674 aa14.21□□□□□ -0.13
TGFB3-201ENST00000238682 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
TGFB3-201ENST00000238682 ATP1B4Q9UN42 357 aaPredicted RBP14.2□□□□□ -0.14
TGFB3-201ENST00000238682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
TGFB3-201ENST00000238682 ABCA6Q8N139 1617 aa14.2□□□□□ -0.14
TGFB3-201ENST00000238682 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
TGFB3-201ENST00000238682 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
TGFB3-201ENST00000238682 INO80Q9ULG1 1556 aaPredicted RBP14.2□□□□□ -0.14
TGFB3-201ENST00000238682 RTEL1-TNFRSF6BF6WH68 1400 aa14.2□□□□□ -0.14
TGFB3-201ENST00000238682 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
TGFB3-201ENST00000238682 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
TGFB3-201ENST00000238682 PREX1Q8TCU6 1659 aa14.18□□□□□ -0.14
TGFB3-201ENST00000238682 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
TGFB3-201ENST00000238682 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
TGFB3-201ENST00000238682 RSPH4AQ5TD94 716 aa14.17□□□□□ -0.14
TGFB3-201ENST00000238682 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 ADGBQ8N7X0 1667 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 NPATQ14207 1427 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
TGFB3-201ENST00000238682 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 ATP7AQ04656 1500 aa14.16□□□□□ -0.14
TGFB3-201ENST00000238682 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
TGFB3-201ENST00000238682 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
TGFB3-201ENST00000238682 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
TGFB3-201ENST00000238682 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
TGFB3-201ENST00000238682 SIGLEC1Q9BZZ2 1709 aa14.14□□□□□ -0.15
TGFB3-201ENST00000238682 NCOA2Q15596 1464 aa14.14□□□□□ -0.15
TGFB3-201ENST00000238682 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
TGFB3-201ENST00000238682 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
TGFB3-201ENST00000238682 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
TGFB3-201ENST00000238682 TCOF1Q13428 1488 aaKnown RBP14.11□□□□□ -0.15
TGFB3-201ENST00000238682 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
TGFB3-201ENST00000238682 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
TGFB3-201ENST00000238682 A2MP01023 1474 aa14.1□□□□□ -0.15
TGFB3-201ENST00000238682 CFDP1Q9UEE9 299 aaPredicted RBP14.1□□□□□ -0.15
TGFB3-201ENST00000238682 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
TGFB3-201ENST00000238682 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
TGFB3-201ENST00000238682 CCDC141Q6ZP82 1450 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms