RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
MDH1-201ENST00000233114 MYOM3Q5VTT5 1437 aa14.3□□□□□ -0.12
MDH1-201ENST00000233114 FBLN2P98095 1184 aa14.29□□□□□ -0.12
MDH1-201ENST00000233114 NCOA2Q15596 1464 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
MDH1-201ENST00000233114 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.12
MDH1-201ENST00000233114 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.12
MDH1-201ENST00000233114 WDR62O43379 1518 aa14.27□□□□□ -0.13
MDH1-201ENST00000233114 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
MDH1-201ENST00000233114 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
MDH1-201ENST00000233114 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
MDH1-201ENST00000233114 AKNAQ7Z591 1439 aa14.23□□□□□ -0.13
MDH1-201ENST00000233114 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
MDH1-201ENST00000233114 MIA2Q96PC5 1412 aa14.2□□□□□ -0.14
MDH1-201ENST00000233114 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
MDH1-201ENST00000233114 EPRSP07814 1512 aaKnown RBP14.19□□□□□ -0.14
MDH1-201ENST00000233114 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
MDH1-201ENST00000233114 MAGI3Q5TCQ9 1506 aa14.19□□□□□ -0.14
MDH1-201ENST00000233114 NAIPQ13075 1403 aa14.18□□□□□ -0.14
MDH1-201ENST00000233114 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
MDH1-201ENST00000233114 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
MDH1-201ENST00000233114 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.14
MDH1-201ENST00000233114 MKRN4PQ13434 485 aaPredicted RBP14.13□□□□□ -0.15
MDH1-201ENST00000233114 GRIN2AQ12879 1464 aa14.13□□□□□ -0.15
MDH1-201ENST00000233114 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
MDH1-201ENST00000233114 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
MDH1-201ENST00000233114 PPP1R15AO75807 674 aaPredicted RBP14.12□□□□□ -0.15
MDH1-201ENST00000233114 DISP1Q96F81 1524 aa14.12□□□□□ -0.15
MDH1-201ENST00000233114 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
MDH1-201ENST00000233114 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
MDH1-201ENST00000233114 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
MDH1-201ENST00000233114 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
MDH1-201ENST00000233114 EVX2Q03828 476 aa14.1□□□□□ -0.15
MDH1-201ENST00000233114 CDK13Q14004 1512 aaKnown RBP14.1□□□□□ -0.15
MDH1-201ENST00000233114 RAPGEF6Q8TEU7 1601 aa14.1□□□□□ -0.15
MDH1-201ENST00000233114 MYT1Q01538 1121 aa14.09□□□□□ -0.15
MDH1-201ENST00000233114 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
MDH1-201ENST00000233114 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
MDH1-201ENST00000233114 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
MDH1-201ENST00000233114 ROCK1Q13464 1354 aa14.07□□□□□ -0.16
MDH1-201ENST00000233114 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
MDH1-201ENST00000233114 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
MDH1-201ENST00000233114 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
MDH1-201ENST00000233114 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
MDH1-201ENST00000233114 CDK11AQ9UQ88 783 aaPredicted RBP14.03□□□□□ -0.16
MDH1-201ENST00000233114 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
MDH1-201ENST00000233114 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
MDH1-201ENST00000233114 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.16
MDH1-201ENST00000233114 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.17
MDH1-201ENST00000233114 NUP160Q12769 1436 aa14.01□□□□□ -0.17
MDH1-201ENST00000233114 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
MDH1-201ENST00000233114 DAPK1P53355 1430 aa14□□□□□ -0.17
MDH1-201ENST00000233114 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
MDH1-201ENST00000233114 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
MDH1-201ENST00000233114 CCER2I3L3R5 266 aa13.98□□□□□ -0.17
MDH1-201ENST00000233114 DENND4BO75064 1496 aaPredicted RBP13.98□□□□□ -0.17
MDH1-201ENST00000233114 KDM6BO15054 1643 aa13.96□□□□□ -0.17
MDH1-201ENST00000233114 ABCC5O15440 1437 aa13.96□□□□□ -0.17
MDH1-201ENST00000233114 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
MDH1-201ENST00000233114 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
MDH1-201ENST00000233114 RRP7BPQ9NSQ0 103 aa13.95□□□□□ -0.18
MDH1-201ENST00000233114 ADGRL2O95490 1459 aa13.94□□□□□ -0.18
MDH1-201ENST00000233114 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
MDH1-201ENST00000233114 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
MDH1-201ENST00000233114 CAMSAP2Q08AD1 1489 aa13.92□□□□□ -0.18
MDH1-201ENST00000233114 C19orf67A6NJJ6 358 aa13.91□□□□□ -0.18
MDH1-201ENST00000233114 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
MDH1-201ENST00000233114 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
MDH1-201ENST00000233114 ABCA8O94911 1581 aa13.91□□□□□ -0.18
MDH1-201ENST00000233114 ANP32CO43423 234 aa13.91□□□□□ -0.18
MDH1-201ENST00000233114 CHIC2Q9UKJ5 165 aa13.91□□□□□ -0.18
MDH1-201ENST00000233114 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
MDH1-201ENST00000233114 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
MDH1-201ENST00000233114 GPATCH8Q9UKJ3 1502 aaKnown RBP13.9□□□□□ -0.18
MDH1-201ENST00000233114 ANKRD30BQ9BXX2 1392 aa13.89□□□□□ -0.19
MDH1-201ENST00000233114 PLB1Q6P1J6 1458 aa13.89□□□□□ -0.19
MDH1-201ENST00000233114 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
MDH1-201ENST00000233114 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
MDH1-201ENST00000233114 KIF14Q15058 1648 aa13.87□□□□□ -0.19
MDH1-201ENST00000233114 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
MDH1-201ENST00000233114 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
MDH1-201ENST00000233114 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
MDH1-201ENST00000233114 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
MDH1-201ENST00000233114 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
MDH1-201ENST00000233114 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
MDH1-201ENST00000233114 ABCC10Q5T3U5 1492 aa13.84□□□□□ -0.19
MDH1-201ENST00000233114 CDC42BPAQ5VT25 1732 aa13.83□□□□□ -0.19
MDH1-201ENST00000233114 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.19
MDH1-201ENST00000233114 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
MDH1-201ENST00000233114 PZPP20742 1482 aa13.83□□□□□ -0.2
MDH1-201ENST00000233114 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
MDH1-201ENST00000233114 ARID3CA6NKF2 412 aa13.82□□□□□ -0.2
MDH1-201ENST00000233114 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
MDH1-201ENST00000233114 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
MDH1-201ENST00000233114 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
MDH1-201ENST00000233114 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms