RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
DDX1-201ENST00000233084 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
DDX1-201ENST00000233084 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
DDX1-201ENST00000233084 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
DDX1-201ENST00000233084 SALL2Q9Y467 1007 aaPredicted RBP21.92■■□□□ 1.1
DDX1-201ENST00000233084 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
DDX1-201ENST00000233084 ADCY10Q96PN6 1610 aa21.91■■□□□ 1.1
DDX1-201ENST00000233084 NCOA2Q15596 1464 aa21.89■■□□□ 1.1
DDX1-201ENST00000233084 HNRNPUQ00839 825 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDX1-201ENST00000233084 RRBP1Q9P2E9 1410 aaKnown RBP21.87■■□□□ 1.09
DDX1-201ENST00000233084 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
DDX1-201ENST00000233084 CCDC136Q96JN2 1154 aa21.86■■□□□ 1.09
DDX1-201ENST00000233084 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
DDX1-201ENST00000233084 RIMBP3CA6NJZ7 1639 aa21.85■■□□□ 1.09
DDX1-201ENST00000233084 RIMBP3BA6NNM3 1639 aa21.85■■□□□ 1.09
DDX1-201ENST00000233084 RIMBP3Q9UFD9 1639 aa21.85■■□□□ 1.09
DDX1-201ENST00000233084 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
DDX1-201ENST00000233084 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
DDX1-201ENST00000233084 KIF14Q15058 1648 aa21.84■■□□□ 1.09
DDX1-201ENST00000233084 MAPKBP1O60336 1514 aa21.83■■□□□ 1.08
DDX1-201ENST00000233084 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.08
DDX1-201ENST00000233084 NOP58Q9Y2X3 529 aaKnown RBP21.82■■□□□ 1.08
DDX1-201ENST00000233084 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
DDX1-201ENST00000233084 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
DDX1-201ENST00000233084 RTN4Q9NQC3 1192 aaKnown RBP21.79■■□□□ 1.08
DDX1-201ENST00000233084 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
DDX1-201ENST00000233084 PLEKHD1A6NEE1 506 aa21.77■■□□□ 1.08
DDX1-201ENST00000233084 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.07
DDX1-201ENST00000233084 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
DDX1-201ENST00000233084 IL27Q8NEV9 243 aa21.74■■□□□ 1.07
DDX1-201ENST00000233084 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
DDX1-201ENST00000233084 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.07
DDX1-201ENST00000233084 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
DDX1-201ENST00000233084 ITSN2Q9NZM3 1697 aa21.7■■□□□ 1.06
DDX1-201ENST00000233084 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.7■■□□□ 1.06
DDX1-201ENST00000233084 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
DDX1-201ENST00000233084 ERICH6BQ5W0A0 696 aa21.67■■□□□ 1.06
DDX1-201ENST00000233084 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
DDX1-201ENST00000233084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.66■■□□□ 1.06
DDX1-201ENST00000233084 TTC37Q6PGP7 1564 aa21.66■■□□□ 1.06
DDX1-201ENST00000233084 MIA2Q96PC5 1412 aa21.66■■□□□ 1.06
DDX1-201ENST00000233084 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
DDX1-201ENST00000233084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX1-201ENST00000233084 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
DDX1-201ENST00000233084 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.06
DDX1-201ENST00000233084 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
DDX1-201ENST00000233084 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
DDX1-201ENST00000233084 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
DDX1-201ENST00000233084 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
DDX1-201ENST00000233084 PREX2Q70Z35 1606 aa21.61■■□□□ 1.05
DDX1-201ENST00000233084 MYO5CQ9NQX4 1742 aa21.59■■□□□ 1.05
DDX1-201ENST00000233084 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.04
DDX1-201ENST00000233084 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
DDX1-201ENST00000233084 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
DDX1-201ENST00000233084 ZNF644Q9H582 1327 aaPredicted RBP21.55■■□□□ 1.04
DDX1-201ENST00000233084 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
DDX1-201ENST00000233084 ABCA9Q8IUA7 1624 aa21.53■■□□□ 1.04
DDX1-201ENST00000233084 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
DDX1-201ENST00000233084 ZBTB47Q9UFB7 747 aaPredicted RBP21.53■■□□□ 1.04
DDX1-201ENST00000233084 IPO9Q96P70 1041 aaKnown RBP21.52■■□□□ 1.04
DDX1-201ENST00000233084 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
DDX1-201ENST00000233084 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
DDX1-201ENST00000233084 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
DDX1-201ENST00000233084 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
DDX1-201ENST00000233084 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
DDX1-201ENST00000233084 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
DDX1-201ENST00000233084 PLCH2O75038 1416 aa21.47■■□□□ 1.03
DDX1-201ENST00000233084 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
DDX1-201ENST00000233084 TONSLQ96HA7 1378 aa21.47■■□□□ 1.03
DDX1-201ENST00000233084 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
DDX1-201ENST00000233084 DAPK1P53355 1430 aa21.46■■□□□ 1.03
DDX1-201ENST00000233084 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
DDX1-201ENST00000233084 ABCC5O15440 1437 aa21.44■■□□□ 1.02
DDX1-201ENST00000233084 UBE2Q2Q8WVN8 375 aa21.4■■□□□ 1.02
DDX1-201ENST00000233084 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
DDX1-201ENST00000233084 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
DDX1-201ENST00000233084 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
DDX1-201ENST00000233084 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.02
DDX1-201ENST00000233084 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.02
DDX1-201ENST00000233084 HFM1A2PYH4 1435 aa21.37■■□□□ 1.01
DDX1-201ENST00000233084 GCC2Q8IWJ2 1684 aa21.37■■□□□ 1.01
DDX1-201ENST00000233084 ADGBQ8N7X0 1667 aa21.37■■□□□ 1.01
DDX1-201ENST00000233084 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
DDX1-201ENST00000233084 ABCC1P33527 1531 aa21.36■■□□□ 1.01
DDX1-201ENST00000233084 DIP2BQ9P265 1576 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 ARHGEF12Q9NZN5 1544 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
DDX1-201ENST00000233084 NEFMP07197 916 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 MAP3K4Q9Y6R4 1608 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 GLI2P10070 1586 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 FANCAO15360 1455 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 NAIPQ13075 1403 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 HNRNPMP52272 730 aaKnown RBP eCLIP21.35■■□□□ 1.01
DDX1-201ENST00000233084 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
DDX1-201ENST00000233084 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
DDX1-201ENST00000233084 WASHC2AQ641Q2 1341 aa21.34■■□□□ 1.01
DDX1-201ENST00000233084 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
DDX1-201ENST00000233084 SHANK2Q9UPX8 1470 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms